Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0071 ATGGCGCTCTACGGCGGCGGCGACAATCCCGCAGTGGATCCAAGAAGCGGCTTCTGCAGCTCCACTAAAATCTTCCACAGCAAACGCCGCCCAATCCCACTCCCACCCAAGCAATCTCTGAATGCGACGTCGTTTATCTCTTCCCGCCCCCACAACGGCAAAATCGCACTCATCGACGCCGCCACCGGCCAACATATCACCTACTCCCAACTCTGGGAATTCGTCGATTCCGTCGCCGCCGCTCTCTCCGACATCGGCATCAGAAAAGGCCACGTCATCCTCCTTCTATCCCCAAATTCAATTTTCTTCCCCATCATCTGCCTCGCAGTCATGTCCATCGGCGCAATCATCACCACAACCAACCCACTAAACACCGCCCAAGAAATCGCCAAACAAATCGCCGATTCGAAGCCGATTTTGGCCTTCACAACCCAGCAACTGATCCCCAAAATCGCCAGTTCGAATTTGCCCATAGTCCTAATCGACGGTCAAAATGAAAACCCCGCAGGAAATAAAGTCAAAATCGTGTCGAATTTGGGGGAAATGATGAGGAAAAATCCAAGCGGGAGCAGAATTACGGAGCCGGTGGAGCAGAACGACACAGCGACTCTGCTCTATTCCTCTGGAACGACAGGGGCGAGTAAAGGCGTGGTGTCGTCCCACAAGAATATCATAGCCATGGTTCAAGTCGTCGTGACGCGATTCAATTTAAGCGACGGGGAAGGAACTTTCATCTGTACAGTTCCGATGTTTCATATTTATGGCCTCGTGGCGTTCGCGACGGGGCTTCTCTCGTCGGGATCGACGATCGTTGTGTTGTCGAAATTCGAGATTCACGAAATGCTGTCGGCGATCGAGAGGTACCGGGCGACGTTTCTTCCCCTCGTGCCGCCGATTCTGGTAGCGCTCGTGAACGCCGCCGATCAGATCAAGGGGAAGTACGATTTGAGTTCGCTGCGTACGGCACTTTCCGGTGGAGCGCCGCTGGGGAAGGAGGTGATAGAGGGGTTTGTGGAGAAGTATCCGAATGTTACGATTCTTCAGGGCTACGGCTTAACGGAATCGACCGGAATTGGGGCGTCCACCGATTCTCTGGAGGAGAGCCGGCGGTACGGCACGGCGGGGCTTCTGTCGCCGAGCACGGAGGGGAAGATCGTGGACCCTGATAGCGGCGAAGCGCTGCCGGTGAAGCGGACGGGGGAGCTTTGGCTGAGAGGGCCCACCATAATGAAAGGGTATTTTGGTAACGTGGAGGCCACGACCTCAACACTTGACTCGGAGGGATGGTTGAGAACTGGAGATCTGTGTTACATTGATGAAGATGGTTTTATTTTTGTGGTTGATAGGCTTAAGGAACTCATCAAATATAAGGGTTATCAGGTCCCTCCTGCTGAATTAGAGGCTTTATTACTTACTCATCCTAATATCTCTGATGCAGCTGTGATTCCGTATCCGGACAGAGACGTTGGACAGTATCCAATGGCGTACGTTGTGAGAAAGGGTGGAAATGACATTTCACATGAAGATGTAATGCAATTCATTGCAAAACAGGTGGCACCGTACAAGAGAATCCGGCGGGTGGCTTTCGTGGACTCGATTCCGAAGAATCCGTCGGGGAAGATCCTGAGGAAGGATCTCATAAAGCTCGCGACCTCTAACTCTAAACTCTGA 1671 52.66 MALYGGGDNPAVDPRSGFCSSTKIFHSKRRPIPLPPKQSLNATSFISSRPHNGKIALIDAATGQHITYSQLWEFVDSVAAALSDIGIRKGHVILLLSPNSIFFPIICLAVMSIGAIITTTNPLNTAQEIAKQIADSKPILAFTTQQLIPKIASSNLPIVLIDGQNENPAGNKVKIVSNLGEMMRKNPSGSRITEPVEQNDTATLLYSSGTTGASKGVVSSHKNIIAMVQVVVTRFNLSDGEGTFICTVPMFHIYGLVAFATGLLSSGSTIVVLSKFEIHEMLSAIERYRATFLPLVPPILVALVNAADQIKGKYDLSSLRTALSGGAPLGKEVIEGFVEKYPNVTILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEGKIVDPDSGEALPVKRTGELWLRGPTIMKGYFGNVEATTSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPNISDAAVIPYPDRDVGQYPMAYVVRKGGNDISHEDVMQFIAKQVAPYKRIRRVAFVDSIPKNPSGKILRKDLIKLATSNSKL 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 451915 455833 + MC11g0065 Mch11g0071 679005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0071 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 546 - GO:0005777(PANTHER)|GO:0016405(PANTHER)
Mch11g0071 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 26 451 - -
Mch11g0071 556 Gene3D - 452 554 IPR045851 -
Mch11g0071 556 FunFam 4-coumarate--CoA ligase 2 452 553 - -
Mch11g0071 556 Gene3D - 22 451 IPR042099 -
Mch11g0071 556 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Mch11g0071 556 CDD 4CL 34 546 - -
Mch11g0071 556 SUPERFAMILY Acetyl-CoA synthetase-like 48 551 - -
Mch11g0071 556 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Mch11g0071 556 Pfam AMP-binding enzyme 51 414 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0071 Mch-Chr11:451915 Mch3g1363 Mch-Chr3:16257824 9.35E-157 dispersed
Mch11g0071 Mch-Chr11:451915 Mch8g1049 Mch-Chr8:7367318 7.21E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0071 K10526 - csv:101221396 944.495