Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0087 ATGGCTATGGACGACACGGAGAGCTGCAGCAGTAGAGCGGTGGATGGTTTCTCGACTCGGAGTTGGAGGCAGAAGCAGAAGGTTGATGTTTACGACGAAGTTCTTCGTCGACTCAGAGTGTCGCATGAGGCGGAGACCAGCGTTCCTGGTTTTGAGGATGAACTTTGGGCTCATTTTCATCGCCTTCCTACTCGGTATGCTATGGACGTCAATGTAGAGAGGGCTGAAGATGTTCTCATGCACAAAAATCTTCTCTTCATGGCGCATGATCCTGCTGCTCGACCTGCAATTGATGTCCGTCTTGTACAGGTTCATTCATCTCCTGGTGGGAACTCTGGCAAGTCTGTCCATTCGAACTTGAAGGAAAAAGTGGACCAGCGGTTTTCTGATTATGCCAGTAATCAGAGACACCACCCACCACCAGCATTTGGTTCATCAACAGAGGTTGAATATGGTTTTAAAGCCAACGAGTTACATGATAGAGATCAGTCTGGCACTCTCTCCTGGCCAATGCATGAAATTACAATATCAACAATTGATAAGCCAAAGCTACTCAGTCAGTTGACGTCCTTGCTTTCTGAGATTGAGTTGAATATTCAAGAAGCGCATGCTTTTTCAACAACAGATGGCTTTTCCTTGGATGTTTTTGTAGTAGATGGTTGGGCAATTGAGGACACCAAGAAGCTAAAAGATGTACTGGCTGAGGAAATATCAAATATTCAGAAAAGGCATCCTTCAGTTGCACCTTGGAGCGTTTCCCATACTGGGAAGCAAGATCAAACTGGAGTTAAGTTCATTACAAATTGTGTCAACATTCCAAAGGACGAAGTTGATGTTTGGGAAATTGATGCGAGCCTGTTAATCTATGAAAAGAAAATTGTGTCTGGATCTTTTAGTGACTTGTATAGAGGAACTTTCTATGGTCAAGATGTGGCTATTAAGCTTCTCAAAGATGAAAACTTGAATGAGACTGTGCGGCGGGAATTTGCTCAAGAAATTCATATCATGAGAAAAATTCGGCATAAGAATGTTGTCCAATTTATTGGTGCATGTACCAGACCTCCAAGCTTGTGCATTGTTACAGAATACATGTCTGGTGGAAGCATGCACGACTTTTGCCATCAACAAAAGGGCGTTCTTAGTTTTCCATCCTTACTAAGAGTGGCAGTTGATGTGTCCAAGGGAATGGACTATTTGCATCAGAAGAATATCATCCATAGAGATCTGAAAGCTGCAAATCTTTTGATGGACGAAGATGGGGTTGTCAAGGTAGCTGATTTTGGTGTTGCCAGAGTGCAAGCTCAATCTGGTGTGATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCAGAGGTTATTGAGCACAAACCATATGATCATAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTAACAGGACGGCTGCCTTATGATAACCTGACTCCATTACAAGCAGCAATTGGCGTGGTCCAGAAGGGTCTGAGACCTAAGACTCCGAGGCATGCTCATCCAATGATCGTGGACTTGCTTAAGAAATGCTGGCAGCAGGATCCATCTTTGAGACCCGAATTCTCTGAAATTACGAAACTTTTACAGCAGACGCTCAAGGAGGAGCTATGTGGAAGATGA 1644 43.98 MAMDDTESCSSRAVDGFSTRSWRQKQKVDVYDEVLRRLRVSHEAETSVPGFEDELWAHFHRLPTRYAMDVNVERAEDVLMHKNLLFMAHDPAARPAIDVRLVQVHSSPGGNSGKSVHSNLKEKVDQRFSDYASNQRHHPPPAFGSSTEVEYGFKANELHDRDQSGTLSWPMHEITISTIDKPKLLSQLTSLLSEIELNIQEAHAFSTTDGFSLDVFVVDGWAIEDTKKLKDVLAEEISNIQKRHPSVAPWSVSHTGKQDQTGVKFITNCVNIPKDEVDVWEIDASLLIYEKKIVSGSFSDLYRGTFYGQDVAIKLLKDENLNETVRREFAQEIHIMRKIRHKNVVQFIGACTRPPSLCIVTEYMSGGSMHDFCHQQKGVLSFPSLLRVAVDVSKGMDYLHQKNIIHRDLKAANLLMDEDGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVYSFGIVLWELLTGRLPYDNLTPLQAAIGVVQKGLRPKTPRHAHPMIVDLLKKCWQQDPSLRPEFSEITKLLQQTLKEELCGR 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 570645 578261 - MC11g_new0010 Mch11g0087 679021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0087 547 Coils Coil 223 243 - -
Mch11g0087 547 SUPERFAMILY Protein kinase-like (PK-like) 268 535 IPR011009 -
Mch11g0087 547 Pfam Protein tyrosine and serine/threonine kinase 289 535 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 PANTHER SERINE-THREONINE PROTEIN KINASE 138 540 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch11g0087 547 SUPERFAMILY ACT-like 171 235 IPR045865 -
Mch11g0087 547 CDD STKc_MAP3K-like 295 536 - -
Mch11g0087 547 Gene3D Phosphorylase Kinase; domain 1 280 365 - -
Mch11g0087 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 ProSiteProfiles Protein kinase domain profile. 287 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 Gene3D Transferase(Phosphotransferase) domain 1 366 545 - -
Mch11g0087 547 ProSiteProfiles ACT domain profile. 173 250 IPR002912 -
Mch11g0087 547 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 SMART serkin_6 287 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0087 547 FunFam Serine/threonine-protein kinase isoform 1 276 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0087 Mch-Chr11:570645 Mch4g0457 Mch-Chr4:2917781 8.86E-247 dispersed
Mch5g0454 Mch-Chr5:3058410 Mch11g0087 Mch-Chr11:570645 1.81E-24 dispersed
Mch2g0818 Mch-Chr2:5614355 Mch11g0087 Mch-Chr11:570645 5.15E-42 transposed
Mch10g1800 Mch-Chr10:17693023 Mch11g0087 Mch-Chr11:570645 7.32E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77039 PF07714 PK_Tyr_Ser-Thr 4.80E-74 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0087 - - - 0.0