Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0098 ATGGCCCAAACGACGCCCAATCACACGCAGACCGTCGCCGGTTGGGCAGCTCATGATTCTTCCGGCAAGATTGTTCCATTTACTTTCAAACGCAGAGAAAATGGCGCCGACGACGTGACGATACAGATTCTTTACTGTGGAATTTGCCATACTGATCTCCACTTCGCCAAGAACGACTGGGGTGTCACCATGTACCCTGTTGTTCCCGGGCACGAGATTACAGGGGTAATCACGAAGGTGGGAAGCAACGTGAAGAAGTTCAAATTAGGAGACAGAGTGGGGGTTGGCTGTATCGCCGCCTCGTGCTTGAACTGTGAATTCTGCCGCGACTCCCAAGAGAATTACTGCGAAAATCTGCAGTTCACGTACAACGGAATCTTCTGGGATGGGAGTATAACCTATGGCGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTGGTGCACATACCGGAGAGCCTGCCGATGGACGCCGCGGCGCCGTTGCTGTGTGCTGGGATTACAGTGTTCACTCCCATGAAAGACGGCAATCTGATCGGGTCGCCGAGGAAGAAAATCGGAGTGGTGGGGCTGGGAGGGCTGGGCCACATAGCAGTGAAATTTGCGAAGGCGTTTGGGCACCACGTGACGGTCATCAGCACCTCTCCTTCGAAGGAGAAAGAGGCTAAGGAGCGGCTGGGCGCAGACGAGTTCATAGTCAGCAAAGATCCTCAGCAAATGCAGAGAGGGAAGAGGACATTGGATTTCATACTGGACACAGTGTCAGCAGAGCACTCGATTGGACCAATATTGGAACTGCTGAAAGTGAACGGGACATTGTCGATTGTGGGAGCTCCGGACAAGCCAATTCAGTTGCCATCTTTCCCTTTAATATTTGGAAAGAGGACGGTGAAGGGAAGTATAATTGGTGGGATAAAAGAGACGCAAGAGATGATAGACTTGTGTGGAAAGTACAACATCACTTGTGATATTGAGGTGATAAAGCCCGAGGACATCAACCACGCAATGGAACGCCTCATCAACAATGACGTGCGATATCGATTTGTCATTGACATTGCTCAACACAAAGCCAAATATTGA 1083 50.23 MAQTTPNHTQTVAGWAAHDSSGKIVPFTFKRRENGADDVTIQILYCGICHTDLHFAKNDWGVTMYPVVPGHEITGVITKVGSNVKKFKLGDRVGVGCIAASCLNCEFCRDSQENYCENLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDGNLIGSPRKKIGVVGLGGLGHIAVKFAKAFGHHVTVISTSPSKEKEAKERLGADEFIVSKDPQQMQRGKRTLDFILDTVSAEHSIGPILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIKETQEMIDLCGKYNITCDIEVIKPEDINHAMERLINNDVRYRFVIDIAQHKAKY 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 637420 640172 - MC11g0087 Mch11g0098 679032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0098 360 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Mch11g0098 360 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Mch11g0098 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Mch11g0098 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Mch11g0098 360 Gene3D - 15 353 - -
Mch11g0098 360 SUPERFAMILY GroES-like 17 176 IPR011032 -
Mch11g0098 360 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491(InterPro)
Mch11g0098 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Mch11g0098 360 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Mch11g0098 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Mch11g0098 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Mch11g0098 360 Gene3D - 166 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0098 Mch-Chr11:637420 Mch2g1704 Mch-Chr2:15623953 2.80E-152 dispersed
Mch11g0098 Mch-Chr11:637420 Mch10g0473 Mch-Chr10:3081271 2.06E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0098 K00083 - csv:101213170 657.136