Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0100 ATGCAAAGAATTATTTATTTTTCTGTCTTCCTTTTCGCTTCTGTTATCTTCCTTGTTTCTGTCCATGGGAAAACAGCTGCTGAAGCTGGAAACAATGGCGTTTATATCGTCTACATGGGAACTGCATCTGCTTCAAGGACTGACTTCCTTCGGCTTCTTTCCTCTGTCAACAGGCGGAATCGGAATGCAGTGGTGCACACGTACAAACATGGGTTCTCAGGATTTGCAGCTCGTCTCTCAGAAAAGGAAACCCAGGAAATGAGACAAACACCTGGAGTTGTTTCGGTTTTTCCAGATCCATTGTTGAAGTTGCACACAACTCATTCATGGGATTTCTTGGTCAGTCAGACAAGTGTGAAGATCGACGCCAATCCCACCAAATCAGATCCCCCTGCCTCTTCTTCTCAACCATACGATTCCATTATCGGCATCTTGGACACTGGTATCTGGCCGGAATCGGAGAGTTTTAATGACAATGGAATGGGTCCAATACCGTTGAGGTGGAAAGGGACCTGCATGGTAGGCAATGATTTCACCTCCTCCAACTGTAACAAAAAACTGATTGGAGCAAGATTTTACGAAAGTTCAGACAGCGACGAGATACGGTTCCACTCACCTCGGGACGAAGCTGGACATGGCACCCACGTGGCTTCAACGGCGGCCGGCAGCGCTGCGGCTAATGCATCGTACTATGGGCTCGCGGCAGGGACGGCCAAGGGCGGATCCCCAGGGTCAAGGATCGCCATGTATAGAGTATGTGGGACCGACGGCTGCCGTGGGTCGGCGATCATGGCGGCCTTTGATGATGCGATCGCCGATGGGGTCGATGTGTTGTCGCTGTCGCTTGGTTCACCGTACTACTTCAGACAGGAAACGAAGGACGACCCCATTGCCATCGGAGCTTTTCATGCAGTTGAGAAGGGGATTGTAGTGGTCTGCTCCGCCGGAAATGACGGCCCCACCTCGGGGTCGGTGGTGAACGACGCGCCGTGGATTTTAACAGTGGCTGCCTCCACCATTGATCGGGATTTTGAGTCTGATGTTGTGTTGGGCAACAACAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTAAAAAAACTCCTGAATACCCACTGATACAAGGCAAGTCAGCCAAGAAAGCCGATGCCAGTGAAGACAGCGCGAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCTGGTGAAGGGAAAGATAGTTATATGCGAAAGCAGTGTAGAAGGAGGCGGTTCTGATTGGCAAAATCAGATTGAAACAGTGAAGGGTCTTGAAGGTATCGGCATGGTTTTGATTGATGACCGAGCAAAATTAGTTGCGGAGAAGTTTGATGGTTCTAACATAACAGCTATTAGCAAAAAGGATAGTGCTGAGGTCCTCTCCTATGCCAACTCAAGCAGGAACCCAACTGCTACAATCCTACCAACTGTTACCGTAATAAACTATAAGCCAGCGCCTGCTGTGGCATACTTCTCATCCAGAGGACCTAATCCCGCAATACTAAACATAATCAAGCCGGACATATCTGCACCAGGAGTGAACATTCTTGCAGCGTGGCTTGGCAATGACTCAAACTCTACTCCACAAGGAAAAAAGCCTCCACTCTTCAATGTGATCTCGGGAACTTCCATGTCCTGCCCACATGTCTCCGGCGTGGTGGGCTTACTTAGATCGAAAAACCCCTCATGGAGTCCCTCAGCTATCAAGTCGGCTATTATGACAACAGGCACAATCCAGACAAATAACTTGGGATCGCCAATGACTCTGGATACGGGATCGGTAGCCACACCTTATGATTATGGAGCAGGAGAAATATCAACGACTGGAGCATTACAACCAGGACTTGTCTACGAAACCGATATAACAGACTACTTAAACTACCTTTGTTCCCGAGGCTATAACCTGTCGATCATCAAGAGCATCTCAAAAACTGTTCCTGATGGGTTTGATTGCCCCAAAAAACCAACTGCCGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGAAAGGCAAGGAAAGCAAGAAAATAAGCAGAACAGTTACAAATGTGGGTGGCAATGGTGAAACAGTTTACACAGTCAGTGTGGACGCAGCTGGGGAACTAGATGTCAGAGTGATTCCAGAGAAATTGGAGTTCACGAAGAACAATCAGAAGCAGAGTTACCAAGTGGTATTCACCTCAACTGTAGGCACACTGAAGAAAGATGTCTTTGGATCAATAACTTGGACCAATGGAAAATATCGTGTCCGTAGTCCATTTGTGGTAACTAGTAAGAGTAGTGAGCTGGAAGATTACGTATAA 2337 47.54 MQRIIYFSVFLFASVIFLVSVHGKTAAEAGNNGVYIVYMGTASASRTDFLRLLSSVNRRNRNAVVHTYKHGFSGFAARLSEKETQEMRQTPGVVSVFPDPLLKLHTTHSWDFLVSQTSVKIDANPTKSDPPASSSQPYDSIIGILDTGIWPESESFNDNGMGPIPLRWKGTCMVGNDFTSSNCNKKLIGARFYESSDSDEIRFHSPRDEAGHGTHVASTAAGSAAANASYYGLAAGTAKGGSPGSRIAMYRVCGTDGCRGSAIMAAFDDAIADGVDVLSLSLGSPYYFRQETKDDPIAIGAFHAVEKGIVVVCSAGNDGPTSGSVVNDAPWILTVAASTIDRDFESDVVLGNNKVIKGEGINFSALKKTPEYPLIQGKSAKKADASEDSARICSEDSMDEALVKGKIVICESSVEGGGSDWQNQIETVKGLEGIGMVLIDDRAKLVAEKFDGSNITAISKKDSAEVLSYANSSRNPTATILPTVTVINYKPAPAVAYFSSRGPNPAILNIIKPDISAPGVNILAAWLGNDSNSTPQGKKPPLFNVISGTSMSCPHVSGVVGLLRSKNPSWSPSAIKSAIMTTGTIQTNNLGSPMTLDTGSVATPYDYGAGEISTTGALQPGLVYETDITDYLNYLCSRGYNLSIIKSISKTVPDGFDCPKKPTADYISNMNYPTIAVSELKGKESKKISRTVTNVGGNGETVYTVSVDAAGELDVRVIPEKLEFTKNNQKQSYQVVFTSTVGTLKKDVFGSITWTNGKYRVRSPFVVTSKSSELEDYV 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 658316 663793 + MC11g0089 Mch11g0100 679034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0100 778 CDD Peptidases_S8_3 102 582 IPR034197 -
Mch11g0100 778 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Mch11g0100 778 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Mch11g0100 778 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Mch11g0100 778 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Mch11g0100 778 Pfam Subtilase family 141 588 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch11g0100 778 ProSiteProfiles Serine proteases, subtilase domain profile. 109 618 - -
Mch11g0100 778 Gene3D - 635 770 - -
Mch11g0100 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 105 IPR037045 -
Mch11g0100 778 Gene3D Peptidase S8/S53 domain 140 631 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch11g0100 778 SUPERFAMILY Subtilisin-like 138 622 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch11g0100 778 Gene3D - 341 487 - -
Mch11g0100 778 Pfam Peptidase inhibitor I9 34 105 IPR010259 -
Mch11g0100 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Mch11g0100 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 766 IPR045051 -
Mch11g0100 778 CDD PA_subtilisin_like 347 480 - -
Mch11g0100 778 FunFam Subtilisin-like protease SBT1.5 139 352 - -
Mch11g0100 778 Pfam Fibronectin type-III domain 669 767 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0100 Mch-Chr11:658316 Mch4g0363 Mch-Chr4:2285821 5.92E-162 dispersed
Mch8g0166 Mch-Chr8:1070613 Mch11g0100 Mch-Chr11:658316 8.31E-206 transposed
Mch11g0100 Mch-Chr11:658316 Mch2g0997 Mch-Chr2:6758467 7.97E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0100 K25898 - csv:101213415 1205.28