Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0105 ATGAAGAAAAAACCGCTTAATCCTGTTGTTTTACTCCACATTATCTTCGTTTTACTTTTCTCTGCCTGTTTTTGCTTCGCCAATCGTGATATGGAAGCGCTCTTGCAGATGAAGAGCGCCTTGATTGGACCGGGGATGTCGGGGCTTCACGATTGGGAGCCGTCGTCATCGCCTTCTGGACATTGCGCTTTCTCCGGTGTCTCATGCGACGTCGATTACAGAGTTGTTTCGCTTAACGTCTCGAATTTTCGTCTATTTGGCCGGATTTCGCCGGCGATTGGAATGCTGGACAAACTTGTGAACCTAACATTGGTGAATAATAATCTCACTGGAGAGCTTCCTCTGGAAATGGCGAAACTCACGTCCCTTAGGACTCTTAACCTCTCCAACAACGCCTTCCGTGACAATTTACCGGCGGAAATCATGCTCGGAATGACGGAACTCGAGGTCTTCGATATTTATAACAACGAGTTTAGCGGGCCGCTTCCGGAGGAGTTCGTGAAGCTGAAGAAGCTTAAGTATCTTGACCTCGGCGGATGCTACTTCACCGGTCAGATTCCGGAGGTTTACTCTGAGATGCAGACGTTGGAGTTCTTGAGCGTTCGGGGAAATGGGCTTAGCGGAAGGATTCCGGCGAGTTTGGCGCGGTTGAAGAATCTGAGATATCTTTACGCCGGGTATTTTAACCATTACGACGGCGGAATTCCGTCCGAGTTTGGATCGTTGAGTTCCCTTGAGCTTCTCGATTTAGGATACTGTAATCTCTCAGGTGAAATTCCTCCGAGTTTGGGGAATTTGAGGCACCTGCATACTTTGTTTCTACAAATAAATAATCTTACTGGTCGGATTCCCTCGGAACTTTCTGGTTTGGTTAGTCTCAAATCGCTGGACCTCTCGCTGAACGAACTCACCGGAGAGATACCGGCGAGTTTCGCGGCACTGCAGAACATTACGCTGATCAATTTGTTCAGCAACAAACTTCACGGTCCAATTCCTTCTTTCGTCGGTGATTTTCCGCATCTCGAAGTGCTTCAGTTGTGGAGCAACAATTTCACGCTCGAACTCCCCGAGAATCTCGGGCGCAACGGAAAACTGTTTCTGCTCGACGTGGCCACCAACCACCTCACTGGACTCATTCCTCCGGATTTATGCAAAGGTAGTTTGAAGATTTTGATTCTGTTGGATAATTACTTCTTCGGGCCCATCCCTGAGGAACTAGGACACTGTGCATCGCTCACGAAAATAAGAATTGCGGGAAATTTCTTCAATGGAACGGTTCCGGCTGGATTCTTCAATTTTCCCGTGTTGGAGCTACTCGATGTCAGTTATAATTACTTCTCCGGCGCCCTTCCATATCAAATGTCAGGAGAGTCTCTTGGAAGTCTACAGCTTAGTTACAACCACATCACCGGGGAAATTCCGGCGGCTATTAAGAATTTAAAAAACTTGCAGGTTCTTTCTCTGGATCATAACCACTTCACCGGAGAGTTGCCTTTGGGAATATTTGAATTTAATAAGTTGCTGAAGATCAATATGAGCAATAACAACATAAGCGGCGAAATTCCGCATTCGGTCGTTCACTGCACGTCTTTAACGTCAATTGATCTCAGTGTAAATTTCCTCGTAGGCCAAATCCCCAAGGGAATTTCGAAACTGAAAATCTTGAGCGTCCTGAATTTTTCGGGAAATCGACTGACGGGCCAAATTCCGAACGAGATTCGGTCGATGATGAGTCTCACGACTCTAGATTTGTCACACAACAACTTCTTCGGTAGAATTCCCACCGGCGGCCAGTTTTCGGTATTCAACGTCAGCGCATTCGCCGGAAACCCTAACCTCTGCTTCCCCAACCACGGGCCTTGTGCATCTCTACACAGCAATTTCAGATCCTTTAAGCTGATCATTCCAGTCGTTGCGATATTTACTGTCCTGTTATGCATACTCGCCGCTGTTTACCTCCGGAAGCGAAAGAGGATTCAGAAATCAAAGGCTTGGAAGCTCACGGCGTTTCAACGCCTGAACTTCAAAGCGGAAGACGTCCTCGAGTGCTTAAAGGAGGAAAACATCATCGGCAAAGGCGGCGCCGGCGTGGTGTACCGTGGATCTATGCCGGACGGTTCCATCGTCGCGATCAAACTGCTGTTGGGAAGCGGCCGGAACGACCACGGTTTCTCCGCCGAAATCCAGACACTAGGGCGAATCAAGCACCGGAATATCGTCAGGCTTTTGGGCTACGTGTCGAACAGAGACACGAATCTGCTGCTGTACGAGTACATGCCCAATGGGAGCTTGGACCAGAGGCTGCATGGAGCGAAAGGCGCACATCTGCACTGGGACTTGCGGTACAAGATCGCGATGGAAGCCGCCAAAGGGCTCTGTTACTTGCACCATGATTGTACGCCGCTGATCATTCACAGAGACGTGAAGTCCAATAATATACTGCTGGATAAGTTCTTTGAGGCGCATGTGTCGGACTTTGGGCTCGCCAAATTCTTGCAGAACGGCGGCGCGTCCGAGTGCATGTCCTCCATTGCCGGCTCCTACGGCTACATCGCTCCAGAATACGCCTACACACTGAAAGTGGACGAGAAAAGCGACGTGTACAGCTTTGGTGTAGTACTGCTGGAGCTGATAGCCGGGAGGAAGCCAGTGGGCGATTTCGGAGAAGGCGTGGACATAGTGAGGTGGGTCCTGAAAACCACATCGGAGCTGTCTCAGCCGTCGGATGCAGCCTCAGTATTAGCCGTGGTGGACTCGCGGCTCACCGAATACCCTCTCCAATGCGTGATCCACCTCTTCAAAATAGCGATGATGTGCGTGGAGGAAGACAGCTCCGCAAGGCCAACCATGAGGGAGGTCGTCCACATGCTCTCCAACCCCCCAAGGTCTGCCCCTACCCTCATCGACCTCTAA 2913 49.81 MKKKPLNPVVLLHIIFVLLFSACFCFANRDMEALLQMKSALIGPGMSGLHDWEPSSSPSGHCAFSGVSCDVDYRVVSLNVSNFRLFGRISPAIGMLDKLVNLTLVNNNLTGELPLEMAKLTSLRTLNLSNNAFRDNLPAEIMLGMTELEVFDIYNNEFSGPLPEEFVKLKKLKYLDLGGCYFTGQIPEVYSEMQTLEFLSVRGNGLSGRIPASLARLKNLRYLYAGYFNHYDGGIPSEFGSLSSLELLDLGYCNLSGEIPPSLGNLRHLHTLFLQINNLTGRIPSELSGLVSLKSLDLSLNELTGEIPASFAALQNITLINLFSNKLHGPIPSFVGDFPHLEVLQLWSNNFTLELPENLGRNGKLFLLDVATNHLTGLIPPDLCKGSLKILILLDNYFFGPIPEELGHCASLTKIRIAGNFFNGTVPAGFFNFPVLELLDVSYNYFSGALPYQMSGESLGSLQLSYNHITGEIPAAIKNLKNLQVLSLDHNHFTGELPLGIFEFNKLLKINMSNNNISGEIPHSVVHCTSLTSIDLSVNFLVGQIPKGISKLKILSVLNFSGNRLTGQIPNEIRSMMSLTTLDLSHNNFFGRIPTGGQFSVFNVSAFAGNPNLCFPNHGPCASLHSNFRSFKLIIPVVAIFTVLLCILAAVYLRKRKRIQKSKAWKLTAFQRLNFKAEDVLECLKEENIIGKGGAGVVYRGSMPDGSIVAIKLLLGSGRNDHGFSAEIQTLGRIKHRNIVRLLGYVSNRDTNLLLYEYMPNGSLDQRLHGAKGAHLHWDLRYKIAMEAAKGLCYLHHDCTPLIIHRDVKSNNILLDKFFEAHVSDFGLAKFLQNGGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWVLKTTSELSQPSDAASVLAVVDSRLTEYPLQCVIHLFKIAMMCVEEDSSARPTMREVVHMLSNPPRSAPTLIDL 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 701294 706480 + MC11g0094 Mch11g0105 679039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0105 970 SUPERFAMILY Protein kinase-like (PK-like) 675 957 IPR011009 -
Mch11g0105 970 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Mch11g0105 970 SUPERFAMILY L domain-like 387 619 - -
Mch11g0105 970 Gene3D Transferase(Phosphotransferase) domain 1 759 964 - -
Mch11g0105 970 SMART LRR_typ_2 552 576 IPR003591 -
Mch11g0105 970 SMART LRR_typ_2 290 313 IPR003591 -
Mch11g0105 970 SMART LRR_typ_2 242 266 IPR003591 -
Mch11g0105 970 SMART LRR_typ_2 120 144 IPR003591 -
Mch11g0105 970 SMART LRR_typ_2 480 504 IPR003591 -
Mch11g0105 970 SMART LRR_typ_2 338 362 IPR003591 -
Mch11g0105 970 Pfam Protein tyrosine and serine/threonine kinase 686 957 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0105 970 Gene3D Ribonuclease Inhibitor 229 385 IPR032675 -
Mch11g0105 970 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 626 - -
Mch11g0105 970 SMART serkin_6 684 957 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0105 970 Pfam Leucine rich repeat 122 180 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine rich repeat 482 539 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine rich repeat 267 327 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Gene3D Ribonuclease Inhibitor 26 142 IPR032675 -
Mch11g0105 970 Gene3D Ribonuclease Inhibitor 143 228 IPR032675 -
Mch11g0105 970 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 958 IPR050647 -
Mch11g0105 970 ProSiteProfiles Protein kinase domain profile. 684 967 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0105 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 759 968 - -
Mch11g0105 970 Gene3D Phosphorylase Kinase; domain 1 649 758 - -
Mch11g0105 970 Gene3D Ribonuclease Inhibitor 386 622 IPR032675 -
Mch11g0105 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 144 229 - -
Mch11g0105 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0105 970 FunFam Leucine-rich repeat receptor-like kinase 29 143 - -
Mch11g0105 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 230 334 - -
Mch11g0105 970 SUPERFAMILY L domain-like 69 382 - -
Mch11g0105 970 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine Rich Repeat 578 595 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine Rich Repeat 196 217 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine Rich Repeat 459 480 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 Pfam Leucine Rich Repeat 555 576 IPR001611 GO:0005515(InterPro)
Mch11g0105 970 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mch11g0105 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 653 758 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0571 Mch-Chr10:3796896 Mch11g0105 Mch-Chr11:701294 1.17E-134 dispersed
Mch11g0105 Mch-Chr11:701294 Mch7g0882 Mch-Chr7:13388969 3.55E-82 dispersed
Mch11g0105 Mch-Chr11:701294 Mch1g1334 Mch-Chr1:15371501 8.70E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77041 PF07714 PK_Tyr_Ser-Thr 2.60E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0105 - - - 0.0