Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0123 ATGGGAGGCCCACAGCAGCACACGAAAACCTATCAAAACTCAATTTCAATGGCGCTCCTCACTTCCTCCAACCAGAAGAAACCCGCAAGCAATAAACGCAGAAAAAAGCCCCAAAACCAATCCTCATGGGACCAAATCAAGAACCTCCTAACCTGCAAACAGTTAGAAGTTCACGATCCGGCCAAACGGTCACCGGCCTACTCGAAGCTGGGCTCCTCTTGCAGCTCCATATGTAGTTTCAGAGACGTGGTCCATGCCAATGCCAGAGTCGTTCACAGAGCCGACAACTCACCGGAAACCAGCTCCGTCGGTCAGGAAACTAGGTTACTCACCCGAAAACCCGCCAACGGTTCCTCGTCTCGTTCTTTAACGCCGCCGCCGCCGCCGCCCAGAAACAAAAACGGCGCCTCGTCTGCCACCTCCTACTCTTCAAGAGGAATTCAATTCAGAAAGCTTTCTGGGTGTTACGAATGCCACACCATCGTTGACCCTACCAGGTACCCAGTTCCAAGGAGTTCTATCTGTCCATGTCCCCAGTGCGGAGAGGTCTTCCCGAAGATTGAAAACTTAGAGCTTCATCAAGCCGTTCGTCATGCTGTATCGGAGTTGGGTCCTGACGATTCGGGTCGAAACATTGTGGAGATCATATTCAAATCAAGCTGGTTGAAAAAGGATAGTCCGATCTGTAAGATCGAACGGATATTAAAGGTCCACAACACCCAACGCACGATCCAACGGTTCGAGGACTGCCGCGATGCGGTGAAAACACGTGCGCTCGGCAGCACCAGAAAGAACCCGCGATGTGCGGCCGACGGTAACGAGTTGTTGCGGTTCCAGTGCAGCACGTTGTGGTGCGACCTCGGCTCACGTGGCTCCACCGGCTTGTGCGGCTCCATCCCCGGCTGCGGTGTCTGCAGCGTCATCCGCCACGGCTTCCAAGGCGCCGCCGTACCCGTACGGACCACGGCAAGTAGCGGTAGGGCCCACGACTCCTTCGATTGCAGTGACGGGCGCCGGCGGGCGATGCTCGTGTGCCGTGTCATCGCCGGAAGGGTCAAGCGCATCGCTGACGACACGGCGGCCGGAGCGGCGGAGGATGAGAATATGGCGGCGGCCTCCTACGACTCCGTGTCACGCCACTCCGGTATCTACTCGAATCTCGAGGAGTTGGTTATTTTCAATCCAAGGGCTATCCTTCCTTGTTTCGTCGTGATCTACGAAGCCCTCCAAAGCTAA 1236 55.83 MGGPQQHTKTYQNSISMALLTSSNQKKPASNKRRKKPQNQSSWDQIKNLLTCKQLEVHDPAKRSPAYSKLGSSCSSICSFRDVVHANARVVHRADNSPETSSVGQETRLLTRKPANGSSSRSLTPPPPPPRNKNGASSATSYSSRGIQFRKLSGCYECHTIVDPTRYPVPRSSICPCPQCGEVFPKIENLELHQAVRHAVSELGPDDSGRNIVEIIFKSSWLKKDSPICKIERILKVHNTQRTIQRFEDCRDAVKTRALGSTRKNPRCAADGNELLRFQCSTLWCDLGSRGSTGLCGSIPGCGVCSVIRHGFQGAAVPVRTTASSGRAHDSFDCSDGRRRAMLVCRVIAGRVKRIADDTAAGAAEDENMAAASYDSVSRHSGIYSNLEELVIFNPRAILPCFVVIYEALQS 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 781635 784857 - MC11g0110 Mch11g0123 679057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0123 411 SUPERFAMILY ADP-ribosylation 200 407 - -
Mch11g0123 411 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 203 IPR013087 -
Mch11g0123 411 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 41 406 - -
Mch11g0123 411 MobiDBLite consensus disorder prediction 95 120 - -
Mch11g0123 411 MobiDBLite consensus disorder prediction 1 27 - -
Mch11g0123 411 Gene3D - 199 408 - -
Mch11g0123 411 MobiDBLite consensus disorder prediction 1 45 - -
Mch11g0123 411 MobiDBLite consensus disorder prediction 95 140 - -
Mch11g0123 411 ProSitePatterns Zinc finger C2H2 type domain signature. 175 198 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0123 Mch-Chr11:781635 Mch4g1743 Mch-Chr4:20524939 5.55E-105 dispersed
Mch11g0123 Mch-Chr11:781635 Mch10g1143 Mch-Chr10:8567434 1.25E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42540 None None None None Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0123 - - - 0.0