Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0132 ATGTCGGCCGGATTCGGAAAATGCAGCAAAATCCGGCACATTGTCCGGCTCCGCCAAATGCTCCGAAGGTGGCGCAACAAGGCCCGTATGTCCGCCAACCGCATCCCCTCCGACGTCCCCGCCGGCCACGTAGCCGTCTGCGTCGGAACCAGCTGCCGGCGGTTCGTCGTCCGGGCGACCTACTTGAACCACCCGGTTTTCAAGAAACTTCTGGTCCAAGCCGAGGAGGAGTACGGGTTCACCAATCAAGGCCCCTTGGCCATCCCCTGCGACGAGTCGGTCTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGACCAACTCGGGCCGGTTCGGGAATCTGGACGATTTCCAGAGATACTGCCACATCGGAATCAGAACCGGTCTGGATTTATGGCCGGAATCCCGACCTCTGCTTCATGGGTTGGCCGAGAAATCCATCTGG 450 59.56 MSAGFGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESTNSGRFGNLDDFQRYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 844736 845185 - MC11g0119 Mch11g0132 679066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0132 150 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733(InterPro)
Mch11g0132 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 101 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0132 Mch-Chr11:844736 Mch2g1058 Mch-Chr2:7085782 2.98E-64 dispersed
Mch11g0645 Mch-Chr11:4175995 Mch11g0132 Mch-Chr11:844736 2.16E-23 transposed
Mch11g0132 Mch-Chr11:844736 Mch2g1053 Mch-Chr2:7053744 5.33E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0132 K14488 - csv:101216342 296.204