Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0152 ATGGCTGAGGGAGGCTCAGCTTCTGGGAGCAGAATGTGGTGTTCAATTCCTGAGAAGTTTCAGCTGCATGGCGCCATGTTGGCCTTGCAGTTTGGCTATGCTGGCTTCCACGTCGTGTCCAGAGCTGCCCTTAATATGGGCATTAGTAAACTCGTCTTCCTAGTTTACAGGAACATCATTGCTTTTCTTCTCCTGCTTCCCTTTGCCTATTTCCTAGAAAAGAAGGAGCGGCCTGCGACTACTCTCAATTTTCTGCTTCAGTTCTTCCTTCTTGCACTCGTTGGGATCACGGCGAATCAGGGATTCTACTTGTTGGGATTGGAACACACCTCGCCGACGTTTGCATCGGCGATACAAAACTCGGTTCCGGCAATTACATTTCTCATGGCTGCATTGCTCCGGCAAGAAATTGAACAAGTGCGACTAAACAGAAAGGATGGTATAGCAAAAGTGATGGGAACAATATGCTGTGTTGCCGGGGCCACAGTGATCACTCTGTACAAAGGGCCAACAATATACAGCCCAAATGCTCCTAATTCACTACAAACCATCTCCACAACCACAACCGCACCCATTTTTGCCTCTCTTGGGGACGCAAGCGCCAAGAGCTGGACCCTCGGCTGCGTCTTCCTCATCGGCCATTGCTTGTCCTGGTCCGGTTGGCTCGTTCTTCAGGCCCCCGTTCTCAAGAAGTACCCGGCTCGCCTCTCCGTCACTTCCTGTACTTGCTTCTTTGGGATAATCCAGTTCCTCATCATCGCCGCCGTTGTTGAGCGCGATTCTCAGGCTTGGCTCTTCCACTCCGGCGGCGAAATCTTCAGCGTCTTGTACGCCGGCGTGGTGGCTTCTGGAATTGCTTTTGCTGTTCAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTCGTCGCTGTTTATCAACCTGTTCAGACTCTCGTTGTCGCTATCATGGCTTCTTTCGCTTTAGGTGAAGAGTTCTACTTAGGAGGGATCATCGGGGCCGTGCTGATCATCACCGGCTTATACTTCGTCCTATGGGGCAAAAGCGAAGAGAGAAAGTTCGCACTCGAGAAGGCGGCAATCCTCTCCGCGCCGGACCACGGAAGCACCCGTACGCCCGCCCACATCAAGTCCTCCATTGCTCAGCCACTCCTCATCCATCCGTCCAACGAAAATGTTTGA 1179 51.99 MAEGGSASGSRMWCSIPEKFQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPATTLNFLLQFFLLALVGITANQGFYLLGLEHTSPTFASAIQNSVPAITFLMAALLRQEIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPNAPNSLQTISTTTTAPIFASLGDASAKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSCTCFFGIIQFLIIAAVVERDSQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIITGLYFVLWGKSEERKFALEKAAILSAPDHGSTRTPAHIKSSIAQPLLIHPSNENV 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 971425 974538 + MC11g0137 Mch11g0152 679086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0152 392 PANTHER WAT1-RELATED PROTEIN 25 356 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch11g0152 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 168 - -
Mch11g0152 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 268 349 - -
Mch11g0152 392 Pfam EamA-like transporter family 206 344 IPR000620 GO:0016020(InterPro)
Mch11g0152 392 Pfam EamA-like transporter family 27 165 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0152 Mch-Chr11:971425 Mch6g0404 Mch-Chr6:2667078 4.35E-128 dispersed
Mch11g0152 Mch-Chr11:971425 Mch8g0813 Mch-Chr8:5723787 3.01E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0152 - - - 0.0