Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0172 ATGGAGTATCGAGCGTCGTCTACTGTCTACAAGAAATTTTCAAATGCTCGCAGTTTCAACGATAAATCGGCGTATGATGGCGTCTTCGCTGCTCCGTCCAAGCACGGGGCTCCGGTCTTCTCTGCTCGAGTCGAGGACTACAGAGAAATTTTTGGCGGTTCGCGAGTCTCGTCGATTCCGATTCTTGATGTTCCGGCACTCAGCGATAAGAAGCATCCGGTTGATGTTCGTAGCTCGAAGCTCGAGTATTCGAAGATTTTTGGTGGTTTCGACGAGTTAAATTTTGCCATTCCTTATGAGGAACTTCTGGCCGAGTCAAACAAAGCAAAATCGTGTCCTCGGGAAGCTAGGACTTCAGCCGGAAGAGGATCCTCGGCAGCAGAAAATTCTTCTCAGCATGGAAAGGAGAATAACTTTTCCACGCGTGAAGCATCATCTCAACCACTTGATAGAATGGAGTTGGAGAAGATCAACGTTTCACATCAAAAGGTCAACCGAGGAAACACAAATTGTGCAATGGAGACAGCTCACGTAGCTCTTCCCCGTGCTGCTCCAGGTTTTTCATGTTTAATTGATGAACACTCCCCCGTGGAGATGCGTAGAGCTGATAAGCCAACATCTGAAAAATTGAATTATATTTGCCCAGAAAACATTGAGAGTGAGGTGGCAAAGAAGCCAGAGCTTCCAATTTCTGGTGACAGTGAACAGACTTTTAGATCAACTAACCCTACCAATTGTCAAAACAGAACTGGCTGGTTTAGATCAGATTCATCTGATAAGTTATTCAATGGATATGAGGTGGATCAAGGGGTACAGGATCCTGAAACTCCACCAAAATGTAATGTGCTTCCTAAATTTGGTATAAGTGATGGATTTTCAGGGAGAACAACCGGTTTAAGGTCTGAAGCTTTTGAGCACTCTGAAAATCCTTGCGATGTTTCTTCACCACCATATTTTGGGGAAGAGGTTGATGTGGATCCAGTTGCTGCTGCCTCGGTTGCAGCTTTGAGAAAAGCAATTGACGCTGCTCAAGAAAGGATAAACATTGCTAGGGTGTCAATGGAAAGAAGGAAAGGTGCCGGACTTCAAAAGCATAAAAAAGTGAGGTCTTCTAGGAACCTAAATTCTGAAGAGAGAAGGGAGCTAAGAAGTTCAAACAATTCAAGCACATGCCAAGAGAAGATGGCTGGGGAAACATATGGAAAAGTGGATACATCAGAGCAAGGTTTTGCTGAAAGCAGGAAGCAGAGTTCATCTGCAGAATGTCCTGCCACTCAAACAGTGATGAGGGAAAATTTAAATGCCACCGAAACAAATTACATGGAGTTTTTGTCAACAAAAGTTGATTGTAGCGAGGAAGAAGCAGAAGAATTAGAAGCAGTAGAACAATTTTATGAACCTATGTCTTTTGATAAAGATGAGGCAAAAGAACTAAAACGTGAAAAGGAAGACAATGCAGATGAAAATAGATGGCAAGGAAACAATGGAATAGAGGAAACATTTGAGAATCCTGGAGAGTATGGTGATAGCTTTGTACAGGTCAAAGAGGCCAAGGAACCTGAGGAAAGTGGCATAAATTTAAGTGTAATGAAAGGTATACTTTTAAGCAAATTAAAGTCAGTTCTAGGCGTCGTTGAGCATGAAGAAAATAAGATAAAATGTGGGCAAAATCAGCTAGAAACTGAAATAAAGGCCGAGGCATCCATGAAACATGAAAAGTGTGTGGAATTGCTGGAAGAGCTTCAAGTAACAAAAGATCATGAGAAGCTTGCAATCAGGGAGATGGGGGAAAACAACAATATGGAGACCCAAGTAGAGGCTCATCAATGGGTGGTGGAGGAAGTAAGAGATATCTGCCAACGAGAAGAAGAAATTGAAACAAATACTGTCCAAATTGAAAAGGATGTTGAAAAGATATTAGACGAATCTAATGAAAATGAAAGAAATATAAATTGGATTAATGACTCCCATGATGGCAAAGAAGCTGAAGATATGAAAGTAAATGGTGAATCAAAACGAATTGAGGAACTTCAAATAAACAAACAGGATGATGAGATGATTGCAGGGCTTTCCTTTCATTTGTACAATAATGAGAATGGACAAACAAGCATTGGTGAATGTGCAGTATACGAGAGCATTGTAAAAGAAACTCCAGACAATCTGAATACTAAGAATAAAATTGAACTAGAAGATGGTTTATGTGAGCAGGATGAATGTGATAACATCTCAGAAGATCTGGAAGCTAGTAATTTTATAGAAAGTATGGAAAGAGTAGAAGTGATTACTGACCAACCTGAACATGGAGACACTGATATTTCAACAGAAGTAGCTATGACTTCCTTTGAAGCTGTAAATAACGAACCTGGGGCAATTATAGAGGAGGGTGACATGGAGGATAGAGTACCTCCTAAATTGTTTTCCACGGTTGAGGATGCACTTAAGCGTGGAGAATTAACAATTAAAATGGAAGATTCTGATGCAAGCCATATTTCCATCCAAAATGGGATAGATTTTGGTATGATAAATATGAAATTGGAGGAAATGCAATATGATACACCTGTGAACTGGTCCTCTATATTCTGTAGTTTGGGAAACGCTGAAGGTTTCACTCCTGAACTTAGAGTAATTGAGAGAAATAAAAAGAAAATTGAAGTTTCATTGAACGAAGAGAATTATAATGATGATTCACATGAAGAGATGCTCCATGATGAGAATAATATTGAAACGGGTAACCCACCTAGTATATGTGAAGATGAGAAGAAAATCAGTGTTGTAATGGAGGAAACTGTCACGAGCATAATTACTGGAGCAACTGTGGAGAACCATCATGCAACTCTCAAAACAGAAGAGAGTGAAACTGATTATGTTTTGGAAAAAGAAGTGCAGTTGGAATCCAATGATAACAATACTATAGCAGGTAGCCAATTTGGCATGATTGAAATAGACTCGGAAATAATTCATGAGATCAAAAGAAGTCAAAGTCCAAGAGAAAGTGAGAAGAGTTATGAAGAAATCATGAGAGAGGATGGAATTGTAGCTAGTGATTCCTCTGATAAAGAGAAGGAATATGCAGTTCACTTGGAAAATTTGGAAGAAGCTAATTCGCCTGGAAGTTCTGGAAGAAAAGAGAATTTAGCAAATATAGAACAGGAGGTTAGTACTAGCCAAAAGGGAATAGCAAATGAGAATCACCAAACAACCCCAACATTGGATGAAATAGGAATTAATGCTGAAGTGCAGAGAGAAGCAGGAGTTGAATCTGAATTCAACAATGAGACAGCAGCAGCTCATGGTTTGTCTCAAGCTGAAGAGGGAGTAGAGGAGTTACCTGAGATGCTGACAAATCAAAGTATCTTAGAAAATGAGGAGAATCGTCAAGCCCAGTTAATGGAGGAGGAAAAGGTATCCCATGAGAAAGTTGAGAAAGAAGCTGAAGTGATAAAGGAACGGCAGAGAAAAATAGATGAAGCAAAAGAAAAGGAAAGGGAGAGAGAGAGATTAGCTGTAGAAAGAGCAATACGCGAGGCTCGTGAAAGGGCATTTGCAGAAGCCCGAGAGAGGGCTGCTGCTGAGAAAGCATCTGCTGGCACTCGACGAAGAGTAATGGCTGAGGCACGTGAACGCTCGGGGAAGATTTCCATCGAGGCTAACAAGAAGCCTACCACGGAAGCCAAATTAAAAGCTCAACGTGCTGCTGTTGAAATGGCTACTGCTGAGGCAAGAGAGCGTGCTCTAGAAAAAGCTATGTCTGAAAAGGCTATTTCTGAGGCAAGAAATCTGGCCGACAAGATTGTTGCCGAAAAATTATGTGGTGCTGCTGGAGATGGTAAAATAAAGAAGAGCTTTTCATTTAGTGACTCTCAGCCAAAAGGTCCAAGTCCTTCCAGCAATTTCAGACATGCGAATTCATTTAACCTTGGAGGTCCTGAATCTTCTGAGAGAGAGGTGGGATCTGATGGGGAATCAGTTCAGAGATCTAAAGCCAGGTTGGAGAGACATCAACGAACAGTTGAGCGTGTGGCAAAAGCTCTTGCAGAGAAGAATATTCGTGACATTCTCGCACAGAGAGAACAGGAAGAGAGAAATAGATTAGCAGAAGCTCTAGATGCTGAAGTTAAACGGTGGTCAAGTGGGAAGGAAGGAAATCTACGTGCATTGCTTTCAACTCTACAATATATCCTCGGGCCTGACAGTGGGTGGCAGCCAGTCCCTCTAACAGATATCATCACCTCAGCTGCTGTCAAGAAAGCTTACCGTAGAGCAACTCTTTCCGTTCATCCTGACAAATTGCAACAACGTGGTGCAAGCATTCAACAAAAATACATATGCGAGAAGGTTTTTGATCTTTTGAAGGCTGCTTGGAACAGGTTCAACGTGGAGGAACGATAG 4389 41.22 MEYRASSTVYKKFSNARSFNDKSAYDGVFAAPSKHGAPVFSARVEDYREIFGGSRVSSIPILDVPALSDKKHPVDVRSSKLEYSKIFGGFDELNFAIPYEELLAESNKAKSCPREARTSAGRGSSAAENSSQHGKENNFSTREASSQPLDRMELEKINVSHQKVNRGNTNCAMETAHVALPRAAPGFSCLIDEHSPVEMRRADKPTSEKLNYICPENIESEVAKKPELPISGDSEQTFRSTNPTNCQNRTGWFRSDSSDKLFNGYEVDQGVQDPETPPKCNVLPKFGISDGFSGRTTGLRSEAFEHSENPCDVSSPPYFGEEVDVDPVAAASVAALRKAIDAAQERINIARVSMERRKGAGLQKHKKVRSSRNLNSEERRELRSSNNSSTCQEKMAGETYGKVDTSEQGFAESRKQSSSAECPATQTVMRENLNATETNYMEFLSTKVDCSEEEAEELEAVEQFYEPMSFDKDEAKELKREKEDNADENRWQGNNGIEETFENPGEYGDSFVQVKEAKEPEESGINLSVMKGILLSKLKSVLGVVEHEENKIKCGQNQLETEIKAEASMKHEKCVELLEELQVTKDHEKLAIREMGENNNMETQVEAHQWVVEEVRDICQREEEIETNTVQIEKDVEKILDESNENERNINWINDSHDGKEAEDMKVNGESKRIEELQINKQDDEMIAGLSFHLYNNENGQTSIGECAVYESIVKETPDNLNTKNKIELEDGLCEQDECDNISEDLEASNFIESMERVEVITDQPEHGDTDISTEVAMTSFEAVNNEPGAIIEEGDMEDRVPPKLFSTVEDALKRGELTIKMEDSDASHISIQNGIDFGMINMKLEEMQYDTPVNWSSIFCSLGNAEGFTPELRVIERNKKKIEVSLNEENYNDDSHEEMLHDENNIETGNPPSICEDEKKISVVMEETVTSIITGATVENHHATLKTEESETDYVLEKEVQLESNDNNTIAGSQFGMIEIDSEIIHEIKRSQSPRESEKSYEEIMREDGIVASDSSDKEKEYAVHLENLEEANSPGSSGRKENLANIEQEVSTSQKGIANENHQTTPTLDEIGINAEVQREAGVESEFNNETAAAHGLSQAEEGVEELPEMLTNQSILENEENRQAQLMEEEKVSHEKVEKEAEVIKERQRKIDEAKEKERERERLAVERAIREARERAFAEARERAAAEKASAGTRRRVMAEARERSGKISIEANKKPTTEAKLKAQRAAVEMATAEARERALEKAMSEKAISEARNLADKIVAEKLCGAAGDGKIKKSFSFSDSQPKGPSPSSNFRHANSFNLGGPESSEREVGSDGESVQRSKARLERHQRTVERVAKALAEKNIRDILAQREQEERNRLAEALDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPVPLTDIITSAAVKKAYRRATLSVHPDKLQQRGASIQQKYICEKVFDLLKAAWNRFNVEER 1462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1117506 1128205 - MC11g0156 Mch11g0172 679106

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0172 1462 Coils Coil 468 488 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 122 147 - -
Mch11g0172 1462 Coils Coil 441 461 - -
Mch11g0172 1462 Gene3D DnaJ domain 1335 1462 IPR036869 -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1125 1147 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1282 1334 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 229 252 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1189 1224 - -
Mch11g0172 1462 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 10 1462 - GO:0005737(PANTHER)|GO:0030276(PANTHER)|GO:0031982(PANTHER)|GO:0043231(PANTHER)|GO:0072318(PANTHER)|GO:0072583(PANTHER)
Mch11g0172 1462 MobiDBLite consensus disorder prediction 370 384 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1282 1309 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 480 505 - -
Mch11g0172 1462 Coils Coil 1323 1374 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 410 427 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1052 1147 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 233 252 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 358 427 - -
Mch11g0172 1462 FunFam Auxilin-related protein 1 1333 1462 - -
Mch11g0172 1462 Coils Coil 1228 1248 - -
Mch11g0172 1462 Coils Coil 333 353 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1052 1073 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 108 150 - -
Mch11g0172 1462 MobiDBLite consensus disorder prediction 1314 1334 - -
Mch11g0172 1462 SUPERFAMILY Chaperone J-domain 1322 1458 IPR036869 -
Mch11g0172 1462 Coils Coil 1130 1179 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0172 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0172 Mch-Chr11:1117506 Mch1g0239 Mch-Chr1:5333530 9.67E-54 dispersed
Mch1g1516 Mch-Chr1:16556360 Mch11g0172 Mch-Chr11:1117506 2.17E-76 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g927 Blo01g01557 . . . Bpe02g00398 . . Bma01g02313 . . Cma01g01899 . Car01g01482 . . . . . . . . . . . . . . . . . . . Cone7ag1817 . . . Csa03g04197 Chy04g00522 . . . . . . . . . Sed13g1633 Cmo01g01963 . . . . . . Cpe02g00135 Bhi09g02158 Tan01g4952 Cmetu04g2517 . Hepe01g1669 Mch11g0172 . Cla05g01952 Cam05g2098 Cec05g2107 Cco05g2163 Clacu05g2090 Cmu05g1966 Cre05g2084 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008012 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 8 1 0 35