Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0206 CATTCTCTTCCTCTTACGCTCGTCGTTTCCCTTCTTCTCACAGTCCTCCTGAAATTTATCTACTCCACTTTCTGGCTTCCATGGAGAATTCAAATCCACTTCCGAAAGCAAGGGATAACAGGCCCTCGCTACCGCCCGATCACCGGGAACTCCGCCGATATCCGCCGTCTGTTTTCGGAAGCACAATCGAAGCCGATTCCCTTTCACCACGATATCCTCTGTCGCGCTCTGCCTTTTTACTTCCGTTGGTCCGCCGAGTACGGGAAGACGTTTCTGTACTGGTTCGGGTCGAATCCGCGACTGGCCATATCCGACCCGGAGTTGATTAAGGAGGTGCTTGTGAATACGGGCGGGTCGTTTCGAAAGGTCGGGTTCAACCCGCTGTCGAAGGCGCTCTTCGGGGAGGGGCTTGTCGGGCTGGAGGGCCAAAAATGGGCCACGCACCGGAGGATCGCAAACCAAGCTTTCACAATCGAGCGTGTAAAGGTAATAATACGGTTTCTGTACCTGAAAAGTGAGAATCGAAAAATGATTATTGAATATGTGTGGAATGTGTTAGAGAAATGGGAGGAGATGAAGGGCGGAATGGAGGAGTTTGAATTGGAAGTCCACGAAGAATTTCGTCGGCTGTCAGCAGACGTAATTTCAAGAACCGCATTTGGAAGTAACTTTGAAGAAGGCAAACGCATCTTCGATTTGCTTGAACAGCAAACGCATCTTTTTTCCCAGGCAGTCAGAAGTGTTTATATTCCTGGCTTCAGATTTTTGCCAACCAAGAAGAATAGAGAGAGGTGGAGATTGGAGAAAGAAACTCGTGAATCAATAAAACTGTTGATTGAGACTAACAGCAAAGGGAGGGAAAACTCAACTAATCTACTCGGCCTATTAATGTCATCTTACAAGAATCAAAATGGGGGAGAAGAAAGACTTGGAGTGGAGGAAATCATTGATGAATGTAAGACATTCTATTTTGCAGGAATGGAAACAACTGCTCATCTTCTAACTTGGGCCCTTCTACTGCTAGCAAAGCATCAAGAATGGCAAGACAAGGCCCGAGAAGAAGTTCTCCACATCTGCGGGTGCAAAACGCCACCTATGGCGGAGAATTTGAGCGAACTTAAAATCATAAGTATGATAATCAACGAAACACTTCGACTCTATCCTCCGGCAGTGATGTTGAATAGGCAGGCGTCGAAACGGCTGACGCTGCGAGGCATAGACATTCCTGCAGGCACACAACTCTACATGGCCGTAGCTGCTGTCCACCATGACACAGAGATTTGGGGAGAAGATGCCAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGAAAACATTTAGCTTCATTTGTGCCATTTTCGTTGGGTCCTAGAATCTGTGTAGGCCAAACCATGGCGTTGGTTGAGGCCAAAATTGCGGTGGCCATGATAATTCAAAGATTCTCTTTTGTTGTTTCTCCAACCTACGCTCATGCCCCTATGCTGTTTGTAACTTTACAGCCTCAGTTTGGTGCTCAGCTCCTCCTTCGGAGCTTA 1536 47.4 HSLPLTLVVSLLLTVLLKFIYSTFWLPWRIQIHFRKQGITGPRYRPITGNSADIRRLFSEAQSKPIPFHHDILCRALPFYFRWSAEYGKTFLYWFGSNPRLAISDPELIKEVLVNTGGSFRKVGFNPLSKALFGEGLVGLEGQKWATHRRIANQAFTIERVKVIIRFLYLKSENRKMIIEYVWNVLEKWEEMKGGMEEFELEVHEEFRRLSADVISRTAFGSNFEEGKRIFDLLEQQTHLFSQAVRSVYIPGFRFLPTKKNRERWRLEKETRESIKLLIETNSKGRENSTNLLGLLMSSYKNQNGGEERLGVEEIIDECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLHICGCKTPPMAENLSELKIISMIINETLRLYPPAVMLNRQASKRLTLRGIDIPAGTQLYMAVAAVHHDTEIWGEDANSFNPLRFGEPRKHLASFVPFSLGPRICVGQTMALVEAKIAVAMIIQRFSFVVSPTYAHAPMLFVTLQPQFGAQLLLRSL 512
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1319174 1321807 + MC11g0179 Mch11g0206 679140
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0206 512 Pfam Cytochrome P450 81 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 SUPERFAMILY Cytochrome P450 36 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0206 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 504 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0206 Mch-Chr11:1319174 Mch6g0961 Mch-Chr6:6792214 1.80E-137 dispersed
Mch11g0206 Mch-Chr11:1319174 Mch8g3105 Mch-Chr8:33444075 1.40E-142 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0206 - - - 0.0