Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0234 | ATGAATCAGCCGCTGATATTCCACTTCAAAGTTCAAACCCATAAATCTTTCCCTCATCTCCAATCAGAATCACCAACCATTCATTCACTCACCCAAATGGATTTTCTTCACGTATCCGCTGCAACAATCTTTGCCCTTCTCTTCTTCTTCTATGCTCTCTTCACCATACCCACAAGGTTCGTTAGTCGTCGGAAGAATCTGCCACCGGAGGCCGGCGGTGGGTGGCCGGTGATCGGCCACCTCCATCAACTAAGTGGAAAAGAGCCAGCTCACACAACGTTGGGCAAAATGGCCGACGCTCACGGCCCAATCTTCATGTTAAAATTGGGTACGCATAGAGCCTTGGTCGTGAGCGGTTGGGAAATAGCAAGGGAATGCTTTACGACCAACGACAAAAAATTCGCATCCCGCCCCAAACTCGCCGCCGCAAAGCTCCTCGGCTACGAATACGCCATGTTCGGAACAAGCCCTTACGGTTCCCACTGGAAACACGTGCGCAAAATTGCGACGCTTGAAGTCCTGGCCAACCACCGTTTGGAGAAGCTCCAGCACATCAGAAGATCGGAGGTTGAGAGCTCCATTAAGAGACTGCATGAGTTATGCGTCAACAAAAAAGTGTTGGTGGAGATGAAGGCGTGGTTTGGAGAAGTGACTTTGAACACGATATTTAGGATGGTGGTTGGAAAGCGATTCTCCACTGCTTTTGAAGGCAGCAGTGGGGAGCAGTACCAGAAGGCGTTGAGGGATTTTCTTTATTTGTTTGGGGCATTTGTTCCGTCGGATTCTTTCCCGTTTCTGAGTTGGTTGGATTTGGGAGGTTATGAGAAGGCCATGAAGAAGACGGCCAAGGTGTTGGATGAGGTGCTTGAGAAATGGCTCACAGAGCATAAACAGAGGAGAATTTCAAGTGGAATGGAAATGGATCAGGGGCTGGATTTCATGGACGTGATGTTGTCTACGGTTAAGGATGAAGAATTTTCTGACTACGATGCCGATACAGTCACCAAAGCTACATGTTTGGCTTTGATATTGGGTGGATTTGACACTACCACAACAGAACTCACATGGGGTCTTTCTTTGCTTCTAAATGATGAAGGAGCGCTTAAAAAGGTCCAATTTGAATTAGACGAACATGTTGGAAGAGAAAGACAAGTGGAGGACTCAGATATGAAGAATTTAATATATCTTCAAGCGGTTGTAAAGGAAACGTTGCGTATGTACCCAGCAGCCCCACTCTCAGTTCCTCACGAATCTTTGGAAGATGTTACTGTTGCTGGGTATTACGTCTCCGCAGGGACACGATTATTGGTGAATCTTCATAAGCTCCAACGAGACCCACTTGTTTGGGAGAATCCGAATGAGTTTTGTCCAGAGAGGTTTTTGACAAGTCAAAAGAATTTTGATGTTAAAGGACAAAATCCTCAATTGATACCGTTTGGAGCTGGTCGAAGAATATGTCCTGGAATGTCATTTGCCATCCAAGCTATGTATTTGATACTTGCAAAACTACTTCATGAGTTTGACATTTGTCGCCCGTCTGAAGAACCACTCAATATGGAGGAGAGTGTTGGGTTGAACAATACTAAAAAGACCCCACTTCAAGTTATTATAACTCCACGCCTTTCTGTCCGAGTTTATGAATGA | 1644 | 45.74 | MNQPLIFHFKVQTHKSFPHLQSESPTIHSLTQMDFLHVSAATIFALLFFFYALFTIPTRFVSRRKNLPPEAGGGWPVIGHLHQLSGKEPAHTTLGKMADAHGPIFMLKLGTHRALVVSGWEIARECFTTNDKKFASRPKLAAAKLLGYEYAMFGTSPYGSHWKHVRKIATLEVLANHRLEKLQHIRRSEVESSIKRLHELCVNKKVLVEMKAWFGEVTLNTIFRMVVGKRFSTAFEGSSGEQYQKALRDFLYLFGAFVPSDSFPFLSWLDLGGYEKAMKKTAKVLDEVLEKWLTEHKQRRISSGMEMDQGLDFMDVMLSTVKDEEFSDYDADTVTKATCLALILGGFDTTTTELTWGLSLLLNDEGALKKVQFELDEHVGRERQVEDSDMKNLIYLQAVVKETLRMYPAAPLSVPHESLEDVTVAGYYVSAGTRLLVNLHKLQRDPLVWENPNEFCPERFLTSQKNFDVKGQNPQLIPFGAGRRICPGMSFAIQAMYLILAKLLHEFDICRPSEEPLNMEESVGLNNTKKTPLQVIITPRLSVRVYE | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1470131 | 1472254 | - | MC11g_new0044 | Mch11g0234 | 679168 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0234 | 547 | Gene3D | Cytochrome P450 | 56 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PANTHER | CYTOCHROME P450 82C3-RELATED | 42 | 542 | IPR050651 | - | |
| Mch11g0234 | 547 | FunFam | Cytochrome P450 82C4 | 59 | 538 | - | - | |
| Mch11g0234 | 547 | SUPERFAMILY | Cytochrome P450 | 74 | 540 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 479 | 488 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0234 | 547 | CDD | CYP82 | 102 | 540 | - | - | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 397 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 354 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 334 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 98 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 217 | 235 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 438 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 122 | 143 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 486 | 509 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | E-class P450 group I signature | 476 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | P450 superfamily signature | 477 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | P450 superfamily signature | 398 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | P450 superfamily signature | 345 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | PRINTS | P450 superfamily signature | 486 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0234 | 547 | Pfam | Cytochrome P450 | 72 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0234 | Mch-Chr11:1470131 | Mch11g0238 | Mch-Chr11:1495013 | 2.65E-161 | dispersed | |
| Mch11g0233 | Mch-Chr11:1467522 | Mch11g0234 | Mch-Chr11:1470131 | 0.00E+00 | tandem | |
| Mch11g0234 | Mch-Chr11:1470131 | Mch11g0235 | Mch-Chr11:1477055 | 1.62E-134 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0234 | - | - | - | 0.0 |