Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0234 ATGAATCAGCCGCTGATATTCCACTTCAAAGTTCAAACCCATAAATCTTTCCCTCATCTCCAATCAGAATCACCAACCATTCATTCACTCACCCAAATGGATTTTCTTCACGTATCCGCTGCAACAATCTTTGCCCTTCTCTTCTTCTTCTATGCTCTCTTCACCATACCCACAAGGTTCGTTAGTCGTCGGAAGAATCTGCCACCGGAGGCCGGCGGTGGGTGGCCGGTGATCGGCCACCTCCATCAACTAAGTGGAAAAGAGCCAGCTCACACAACGTTGGGCAAAATGGCCGACGCTCACGGCCCAATCTTCATGTTAAAATTGGGTACGCATAGAGCCTTGGTCGTGAGCGGTTGGGAAATAGCAAGGGAATGCTTTACGACCAACGACAAAAAATTCGCATCCCGCCCCAAACTCGCCGCCGCAAAGCTCCTCGGCTACGAATACGCCATGTTCGGAACAAGCCCTTACGGTTCCCACTGGAAACACGTGCGCAAAATTGCGACGCTTGAAGTCCTGGCCAACCACCGTTTGGAGAAGCTCCAGCACATCAGAAGATCGGAGGTTGAGAGCTCCATTAAGAGACTGCATGAGTTATGCGTCAACAAAAAAGTGTTGGTGGAGATGAAGGCGTGGTTTGGAGAAGTGACTTTGAACACGATATTTAGGATGGTGGTTGGAAAGCGATTCTCCACTGCTTTTGAAGGCAGCAGTGGGGAGCAGTACCAGAAGGCGTTGAGGGATTTTCTTTATTTGTTTGGGGCATTTGTTCCGTCGGATTCTTTCCCGTTTCTGAGTTGGTTGGATTTGGGAGGTTATGAGAAGGCCATGAAGAAGACGGCCAAGGTGTTGGATGAGGTGCTTGAGAAATGGCTCACAGAGCATAAACAGAGGAGAATTTCAAGTGGAATGGAAATGGATCAGGGGCTGGATTTCATGGACGTGATGTTGTCTACGGTTAAGGATGAAGAATTTTCTGACTACGATGCCGATACAGTCACCAAAGCTACATGTTTGGCTTTGATATTGGGTGGATTTGACACTACCACAACAGAACTCACATGGGGTCTTTCTTTGCTTCTAAATGATGAAGGAGCGCTTAAAAAGGTCCAATTTGAATTAGACGAACATGTTGGAAGAGAAAGACAAGTGGAGGACTCAGATATGAAGAATTTAATATATCTTCAAGCGGTTGTAAAGGAAACGTTGCGTATGTACCCAGCAGCCCCACTCTCAGTTCCTCACGAATCTTTGGAAGATGTTACTGTTGCTGGGTATTACGTCTCCGCAGGGACACGATTATTGGTGAATCTTCATAAGCTCCAACGAGACCCACTTGTTTGGGAGAATCCGAATGAGTTTTGTCCAGAGAGGTTTTTGACAAGTCAAAAGAATTTTGATGTTAAAGGACAAAATCCTCAATTGATACCGTTTGGAGCTGGTCGAAGAATATGTCCTGGAATGTCATTTGCCATCCAAGCTATGTATTTGATACTTGCAAAACTACTTCATGAGTTTGACATTTGTCGCCCGTCTGAAGAACCACTCAATATGGAGGAGAGTGTTGGGTTGAACAATACTAAAAAGACCCCACTTCAAGTTATTATAACTCCACGCCTTTCTGTCCGAGTTTATGAATGA 1644 45.74 MNQPLIFHFKVQTHKSFPHLQSESPTIHSLTQMDFLHVSAATIFALLFFFYALFTIPTRFVSRRKNLPPEAGGGWPVIGHLHQLSGKEPAHTTLGKMADAHGPIFMLKLGTHRALVVSGWEIARECFTTNDKKFASRPKLAAAKLLGYEYAMFGTSPYGSHWKHVRKIATLEVLANHRLEKLQHIRRSEVESSIKRLHELCVNKKVLVEMKAWFGEVTLNTIFRMVVGKRFSTAFEGSSGEQYQKALRDFLYLFGAFVPSDSFPFLSWLDLGGYEKAMKKTAKVLDEVLEKWLTEHKQRRISSGMEMDQGLDFMDVMLSTVKDEEFSDYDADTVTKATCLALILGGFDTTTTELTWGLSLLLNDEGALKKVQFELDEHVGRERQVEDSDMKNLIYLQAVVKETLRMYPAAPLSVPHESLEDVTVAGYYVSAGTRLLVNLHKLQRDPLVWENPNEFCPERFLTSQKNFDVKGQNPQLIPFGAGRRICPGMSFAIQAMYLILAKLLHEFDICRPSEEPLNMEESVGLNNTKKTPLQVIITPRLSVRVYE 547
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1470131 1472254 - MC11g_new0044 Mch11g0234 679168
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0234 547 Gene3D Cytochrome P450 56 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PANTHER CYTOCHROME P450 82C3-RELATED 42 542 IPR050651 -
Mch11g0234 547 FunFam Cytochrome P450 82C4 59 538 - -
Mch11g0234 547 SUPERFAMILY Cytochrome P450 74 540 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g0234 547 CDD CYP82 102 540 - -
Mch11g0234 547 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 122 143 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0234 547 Pfam Cytochrome P450 72 527 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0234 Mch-Chr11:1470131 Mch11g0238 Mch-Chr11:1495013 2.65E-161 dispersed
Mch11g0233 Mch-Chr11:1467522 Mch11g0234 Mch-Chr11:1470131 0.00E+00 tandem
Mch11g0234 Mch-Chr11:1470131 Mch11g0235 Mch-Chr11:1477055 1.62E-134 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0234 - - - 0.0