Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0241 ATGTTTCTGAGCTCTAACGGCCCCGTTATGAAAACGCCGTCTTCCTTGCCGGACCTCTCCTTGAACATCAGTCTTCCGGACTCCGCCTGCAGCGGCACCGATTTCACCCATGAAAATAGTGCCCTTTTCCGCTTAGGCTTTGAAGCGGGGGATCGTACGAGTACCCGTCTTCGTCGGAACCTCCATAGCCGCCGGGAGTTCAAGAGAAGCAGCGGCGGCGGCGGCGGCGGAATGGGCGGCTGTGGGGGTGTGAGAAGAAGCATCCGAGCCCCGAGAATGAGATGGACTACTACTCTCCACGCTCATTTTGTACACGCCGTTGAGCTCCTCGGCGGCCATGAAAGGGCAACGCCAAAATCAGTATTGGAGCTCATGAATGTCAAGGATCTTACCCTAGCTCACGTCAAAAGCCATTTGCAGATGTATCGAACAGTGAAGAATACTGTGAAGGGAACAGATGATGATTGTGGAAGGCCAGAGCTGGACCCAGATACCCTTTTATCTTCTGCTTCATCTGCTCAAAATTCTAGCCCTCAATCTCCTAATTTGCACACAATGCAAAGAAGTAGCTTGGTAACATCGATGCCCGAGATCAGTAGCGAGAGGAATATGTCAAACGACACTTTTGCTAAATCTAGAGGATTTAAGGTGGAAGGAAAGGGAGATTATCGCGAAGCTCTCAGCATGCAGAGAATTAATTTAGAGTTCACTTTGGGAAGACCAAGTTGGCAATTAGATTATGCTGATGCAAATGAGCTTACCCTTCTCAATTGCTAG 777 49.68 MFLSSNGPVMKTPSSLPDLSLNISLPDSACSGTDFTHENSALFRLGFEAGDRTSTRLRRNLHSRREFKRSSGGGGGGMGGCGGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDDCGRPELDPDTLLSSASSAQNSSPQSPNLHTMQRSSLVTSMPEISSERNMSNDTFAKSRGFKVEGKGDYREALSMQRINLEFTLGRPSWQLDYADANELTLLNC 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1520458 1523463 - MC11g0191 Mch11g0241 679175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0241 258 Gene3D - 90 147 - -
Mch11g0241 258 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 11 246 IPR044847 GO:0000976(InterPro)|GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Mch11g0241 258 MobiDBLite consensus disorder prediction 149 203 - -
Mch11g0241 258 MobiDBLite consensus disorder prediction 165 203 - -
Mch11g0241 258 FunFam Myb family transcription factor 89 147 - -
Mch11g0241 258 NCBIfam myb-like DNA-binding domain, SHAQKYF class 91 144 IPR006447 GO:0003677(InterPro)
Mch11g0241 258 SUPERFAMILY Homeodomain-like 88 145 IPR009057 -
Mch11g0241 258 Pfam Myb-like DNA-binding domain 92 143 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0241 Mch-Chr11:1520458 Mch6g2207 Mch-Chr6:24348847 6.99E-33 dispersed
Mch11g0241 Mch-Chr11:1520458 Mch8g0732 Mch-Chr8:5187994 4.51E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42549 PF00249 Myb_DNA-binding 1.10E-05 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0241 - - - 0.0