Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0245 ATGAAGGGTCTGGATTGCTGTTTGTTCGTTTCTCTTCTTCTTCTATCTTCATTTTCATTTTTTTTGTCGGCTCTTTCCGATGCCGAAGTTTATTCCATCACACGCCGCCAGCTCTTGACCCTTCATGAGAACGATGATTTGTCCGATGATTATGAAACCAAAATCCAAGTCAACGAAACCTTCTCCAGTCCCAGACTTCGGCGAGCTTACATTGCCCTTCAAGCTTGGAAGATGACTATTTATTCTGACCCATTGAACACCACTGCCAATTGGGTCGGCGCCGATGTCTGTTCCTACACCGGCGTCTTCTGTGCCCCCGCCCTTGACGACCCTGAACTCGAAGTTGTCGCCGGCATTGATCTCAACCATGCCGACATTGCTGGCTACCTACCCGTTGAGCTCGGTTTGCTGACTGACATCGCCCTATTCCACATCAATAGCAACCGATTCTGCGGTATCGTTCCCACAAGCTTCTGGAGGCTCACACTCCTATATGAATTCGACATTAGCAACAATCGATTCGTCGGCAACTTCCCAGAAGTTGTCATCAGGATCCCCAATCTCAAATACCTCGACCTCAGATTCAATGATTTCGAAGGCGAATTGCCCCCAACACTTTTCACCAAGGAATTGGATGCCATTTTCCTCAACAACAATAGATTCACCTCCAACATCCCGGAGAGTTTCGGCGACTCGCCGGCATCGGTGATTGTAATTGCCAACAATAATTTCACGGGATGCATTCCGAGCAGCATTGGGAAAATGAAGAACACGTTGAAAGAGTTCGTGATGTTGAACAATGGACTTGCGGGCTGTATTCCAGGGGAGATTGGGTTGCTTGGAAATGCCACGGTTGTGGATGTTTCATACAACAAATTGAGTGGGATCTTACCAAAGAGCTTTGATGGGTTGAAGGGAGTGGAGGCGTTGGATATTTCTGGGAATTCGTTGACTGGGTTTGTGGCGGAGGGCGTTTGTAACTTGCCCAAATTAGTTAATTTCACATTCTCTAACAATTTCTTCAATGGCGAAGCCGAGAGCTGCGTGCCCCAGAACAGAAAGAACATTGTGTTGGATGATTCCAGCAATTGTTTGCCAGAGAGGCCGAACCAGAAGACGACACAAATTTGTACTCCCGTGATCCATAAGACTGTTGATTGCAGTAAGGCTAAATGCGGCGGAGGATTGTCACCACCATCGCCATCCACATCGACATCCATGCCACCAAAGCCGGACCAGCCGCAACCACCGAAGCAAGAGATTCCCGAGATTGAGGCACCAACATCATCCATAGTACCCGAGCCTAAAAGTCCACCATCAACTCCAGTGGATGATTCTCATGATCAATCACCAATCCCAAGATACCGACCACCTCCTCCACCAATTCATTCCCCACCACCACCCATCCAATCTCCTCTTGCATCGGTTCACTCTTCACCACCACCTATCCAGTCCCCACCACCCGCACCAGTGCACTCCCCACCACCCGCACCGGTTCACTCCCCACCACTACCCATCCAATCTCCACCACCTCCCATCCAATCTCCACCTCTATCGGTCCAGTCTTCTCTACCACCAGTTTTCTCCCCACCACCACCAGTGCACTCTCCACCACCTCCCATCCAATCTCCACCTCCACTGGTCCAGTCTCCTCCACCACCAGTTTTCTCCCCACCACCTCCTATCCAATCTCCGCCACCACCACCGGTGCACTCCCCTCCACCTCCCGTCCAATCTCCACCACCACCGGTGCACTCTCCACCACCTCCCATCCAATCTTCACCTCCACCGGTCCAGTCTCCTCCACCACCAGTTTTCTCCCCACCACCTCCCGTCCAATCTCCACCTCCACCGATCCAGTCTCCTCCACCACCAGTTTTCTCCCCACCACCACCTGTCCAGTCTCCTCCACCACCGGTTTTCTCCCCACCCCCATCGATTTTCTCTCCACCACCATCTCCAGTGCATTCCCCACCTCCTCCAATCCAGTCTTCACCACCACCTTCTCCATTAGAGGACATCATTCTTCCACCAAATTTGGGCTTCGAGTACTCATCACCCCCTCCACCAATGTTTCCGGGTTACTAA 2088 51.39 MKGLDCCLFVSLLLLSSFSFFLSALSDAEVYSITRRQLLTLHENDDLSDDYETKIQVNETFSSPRLRRAYIALQAWKMTIYSDPLNTTANWVGADVCSYTGVFCAPALDDPELEVVAGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIVPTSFWRLTLLYEFDISNNRFVGNFPEVVIRIPNLKYLDLRFNDFEGELPPTLFTKELDAIFLNNNRFTSNIPESFGDSPASVIVIANNNFTGCIPSSIGKMKNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGILPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPQNRKNIVLDDSSNCLPERPNQKTTQICTPVIHKTVDCSKAKCGGGLSPPSPSTSTSMPPKPDQPQPPKQEIPEIEAPTSSIVPEPKSPPSTPVDDSHDQSPIPRYRPPPPPIHSPPPPIQSPLASVHSSPPPIQSPPPAPVHSPPPAPVHSPPLPIQSPPPPIQSPPLSVQSSLPPVFSPPPPVHSPPPPIQSPPPLVQSPPPPVFSPPPPIQSPPPPPVHSPPPPVQSPPPPVHSPPPPIQSSPPPVQSPPPPVFSPPPPVQSPPPPIQSPPPPVFSPPPPVQSPPPPVFSPPPSIFSPPPSPVHSPPPPIQSSPPPSPLEDIILPPNLGFEYSSPPPPMFPGY 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1548519 1550831 + MC11g_new0051 Mch11g0245 679179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0245 695 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Mch11g0245 695 Gene3D Ribonuclease Inhibitor 236 387 IPR032675 -
Mch11g0245 695 SUPERFAMILY L domain-like 80 365 - -
Mch11g0245 695 MobiDBLite consensus disorder prediction 391 695 - -
Mch11g0245 695 FunFam Leucine-rich repeat extensin-like protein 1 70 231 - -
Mch11g0245 695 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 535 IPR051582 -
Mch11g0245 695 Gene3D Ribonuclease Inhibitor 69 235 IPR032675 -
Mch11g0245 695 MobiDBLite consensus disorder prediction 402 421 - -
Mch11g0245 695 Pfam Leucine rich repeat 284 339 IPR001611 GO:0005515(InterPro)
Mch11g0245 695 MobiDBLite consensus disorder prediction 452 674 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0245 Mch-Chr11:1548519 Mch11g0250 Mch-Chr11:1563635 3.30E-164 dispersed
Mch11g0245 Mch-Chr11:1548519 Mch11g0247 Mch-Chr11:1553378 5.56E-202 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0245 - - - 0.0