Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0250 | ATGAAGGGTCCGGGTTGTTGTTTGTTCATTTCTCTTCTTCTTCTATCTTCTTTTTTACTTTTTTCTTCGGCTCTTTCTGATGCCAAAGTTTATTCCATCACCCACCGCCAGCTCCTGACCCTTCATGAGAACGGTGATTTGCTCGATGATTATGAATCCACAATCCAAGTCAACGAAACTTTCTCCAGCCCCAGACTTCGGCGAGCATACATTGCCCTCCAAGCCTGGAAGATGGCTATTTATTCGGACCCATTAAACACCACCGCCAGTTGGATCGGCGCCGATGTCTGTTCCTACACCGGCGTCTTCTGCGCCCCTGCCCTTGACGACCCCAAACTCGAAGTCGTCGCTGGCATTGATCTTAACCACGCCGACATTGCTGGCTACCTACCCGTCGAGCTCGGTTTGTTGACCGACATCGCTCTGTTCCACATCAATAGCAACCGATTCTGCGGCATCATTCCCACAAGCTTTTGGAGACTCACCCTCCTGTACGAGTTCGACATTAGCAACAATCGATTCGTCGGCCACTTCCCGGAAGTCGTTGTGAGGATCCCCAATCTCAAGTACCTCGATCTAAGGTTCAACGATTTCGAAGGAGAATTGCCCTCATCGCTTTTCACCAAGGAATTGGACGCCATTTTTCTCAACAACAACAGATTCACCTCCAACATCCCGGAGAATTTCGGCGACTCGCCAGCATCGGTGATTGTAATTGCCAACAACAATTTCACGGGATGCATTCCAAGCAGCATTGGGAAAATGGGGAACACGTTGAAAGAATTCGTGATGTTGAACAATGGACTTGCGGGCTGTATTCCAGGGGAGATTGGGTTGCTTGGAAATGCCACAGTTGTGGATGTTTCATACAACAAATTGAGTGGGATCTTGCCCAAGAGCTTTGATGGGTTGAAGGGAGTGGAGGCGTTGGATATTTCTGGGAATTCGTTGACTGGGTTTGTGGCGGAGGGCGTTTGTAACTTGCCCAAATTGGTTAATTTCACATTCTCTAACAATTTCTTCAACGGCGAGGCCGAGAGTTGCGTGCCCCAGAACAGAAAGAACATTGTGTTGGATGATTCCAGCAATTGTTTGCCAGAGAGGCCGAACCAGAAGGCAGTGGAATTTTGTGCTCCAGTGATCCATAAGACCGTTGATTGCGGTAAGGCTAAATGCGGTGGAGGATCGTCATCGTCATCTCCATCCACATCGACGTCCATGCCACCGAATCCGGACCAGCCACAACCACCGAAGCAAGAGGTTCCCGAGATTGAGGCACCAAAATCATCCATAGTATCTGAGCCTGAAAGTCCACCATCAACTCCAGTGGATGATTCTCATGATCAATCGCCAGTCCCAAGATACCGACCTCCCCCGCCATTGGTTCACTCTCCACCACCACTTGTTCAGTCTCCTCCACCACCAATGCACTCTCCACCACCACTCATCCAATCTCCACCACCCGCACCAGTTCGCTCCCCACCACCACGCGTCCAATCTCCTCAACCACCCGTGCACTCTCTACCACCACCCGTCCAATCTCCACCACAGCCACCGGTGCACTCTCCACCACCACCCGTCCAATCTCCTCCACCACCGTCGGTTCAATCTCCACCACCACCCGTCCACTCTCCACCACCTCCGGTCCAATCTCCACCACCACCAGTGCACTCTCCACCACCGCCCGTCCACTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAGTCTCCACCACCACCAGTGCACTCTCCACCACCGCCCGTCCACTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAGTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAATCCCCACCCCCACCGATCCAATCTCCACCTCCATCGGTCCAATCTCCACCTCCACCCGTCCAATCTCCTCCACCACCCGTGCACTCTCCACCACCTCCGGTCCAATCTCCACCTCCACCCGTCCAATCTCCACCACCACCCATTCACTCCCCACCACCTCCAGTACAATCTCCTCTACCACCACCCGTCCAATCTCCTCCACCACCCGTTCACTCCCCACCACCTCCAGTCCAATCTCCCCCACCCCCACCCATTTTCTCTCCACCACCACCGGTATTCTCCCCACCCCCACCAGTTTTCTCTCCACCACCACCGGTATTCTCTCCCCCTCCTCCAGTGCACTTACCACCCCCTCCAGTGCACTCACCATCGCCTCCGGTCCATTCTCCGCCACCACCATCTCCTTCTCCCTCTCCTCCTCCGCCAGTCGCCTCTCCACCGCCTCCGCTAGAGGATATCGTTCTTCCACCAAATATTGGCTTCGAGTACTCATCGCCTCCTCCGCCATTGTTCCCGGGTTACTAA | 2385 | 54.51 | MKGPGCCLFISLLLLSSFLLFSSALSDAKVYSITHRQLLTLHENGDLLDDYESTIQVNETFSSPRLRRAYIALQAWKMAIYSDPLNTTASWIGADVCSYTGVFCAPALDDPKLEVVAGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIIPTSFWRLTLLYEFDISNNRFVGHFPEVVVRIPNLKYLDLRFNDFEGELPSSLFTKELDAIFLNNNRFTSNIPENFGDSPASVIVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGILPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPQNRKNIVLDDSSNCLPERPNQKAVEFCAPVIHKTVDCGKAKCGGGSSSSSPSTSTSMPPNPDQPQPPKQEVPEIEAPKSSIVSEPESPPSTPVDDSHDQSPVPRYRPPPPLVHSPPPLVQSPPPPMHSPPPLIQSPPPAPVRSPPPRVQSPQPPVHSLPPPVQSPPQPPVHSPPPPVQSPPPPSVQSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVQSPPPPIQSPPPSVQSPPPPVQSPPPPVHSPPPPVQSPPPPVQSPPPPIHSPPPPVQSPLPPPVQSPPPPVHSPPPPVQSPPPPPIFSPPPPVFSPPPPVFSPPPPVFSPPPPVHLPPPPVHSPSPPVHSPPPPSPSPSPPPPVASPPPPLEDIVLPPNIGFEYSSPPPPLFPGY | 794 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1563635 | 1566415 | + | MC11g_new0056 | Mch11g0250 | 679184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0250 | 794 | Gene3D | Ribonuclease Inhibitor | 69 | 235 | IPR032675 | - | |
Mch11g0250 | 794 | MobiDBLite | consensus disorder prediction | 452 | 774 | - | - | |
Mch11g0250 | 794 | MobiDBLite | consensus disorder prediction | 407 | 421 | - | - | |
Mch11g0250 | 794 | MobiDBLite | consensus disorder prediction | 433 | 447 | - | - | |
Mch11g0250 | 794 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 10 | 543 | IPR051582 | - | |
Mch11g0250 | 794 | SUPERFAMILY | L domain-like | 81 | 365 | - | - | |
Mch11g0250 | 794 | FunFam | Leucine-rich repeat extensin-like protein 1 | 70 | 231 | - | - | |
Mch11g0250 | 794 | Pfam | Leucine Rich Repeat | 187 | 206 | IPR001611 | GO:0005515(InterPro) | |
Mch11g0250 | 794 | Pfam | Leucine rich repeat | 284 | 339 | IPR001611 | GO:0005515(InterPro) | |
Mch11g0250 | 794 | Gene3D | Ribonuclease Inhibitor | 236 | 377 | IPR032675 | - | |
Mch11g0250 | 794 | PRINTS | Pistil-specific extensin-like signature | 755 | 776 | IPR003882 | - | |
Mch11g0250 | 794 | PRINTS | Pistil-specific extensin-like signature | 654 | 672 | IPR003882 | - | |
Mch11g0250 | 794 | PRINTS | Pistil-specific extensin-like signature | 620 | 643 | IPR003882 | - | |
Mch11g0250 | 794 | MobiDBLite | consensus disorder prediction | 390 | 794 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0245 | Mch-Chr11:1548519 | Mch11g0250 | Mch-Chr11:1563635 | 3.30E-164 | dispersed | |
Mch11g0247 | Mch-Chr11:1553378 | Mch11g0250 | Mch-Chr11:1563635 | 3.56E-164 | dispersed | |
Mch11g0250 | Mch-Chr11:1563635 | Mch7g0650 | Mch-Chr7:11166773 | 3.27E-58 | dispersed | |
Mch11g0248 | Mch-Chr11:1558881 | Mch11g0250 | Mch-Chr11:1563635 | 4.10E-144 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0250 | - | - | - | 0.0 |