Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0250 ATGAAGGGTCCGGGTTGTTGTTTGTTCATTTCTCTTCTTCTTCTATCTTCTTTTTTACTTTTTTCTTCGGCTCTTTCTGATGCCAAAGTTTATTCCATCACCCACCGCCAGCTCCTGACCCTTCATGAGAACGGTGATTTGCTCGATGATTATGAATCCACAATCCAAGTCAACGAAACTTTCTCCAGCCCCAGACTTCGGCGAGCATACATTGCCCTCCAAGCCTGGAAGATGGCTATTTATTCGGACCCATTAAACACCACCGCCAGTTGGATCGGCGCCGATGTCTGTTCCTACACCGGCGTCTTCTGCGCCCCTGCCCTTGACGACCCCAAACTCGAAGTCGTCGCTGGCATTGATCTTAACCACGCCGACATTGCTGGCTACCTACCCGTCGAGCTCGGTTTGTTGACCGACATCGCTCTGTTCCACATCAATAGCAACCGATTCTGCGGCATCATTCCCACAAGCTTTTGGAGACTCACCCTCCTGTACGAGTTCGACATTAGCAACAATCGATTCGTCGGCCACTTCCCGGAAGTCGTTGTGAGGATCCCCAATCTCAAGTACCTCGATCTAAGGTTCAACGATTTCGAAGGAGAATTGCCCTCATCGCTTTTCACCAAGGAATTGGACGCCATTTTTCTCAACAACAACAGATTCACCTCCAACATCCCGGAGAATTTCGGCGACTCGCCAGCATCGGTGATTGTAATTGCCAACAACAATTTCACGGGATGCATTCCAAGCAGCATTGGGAAAATGGGGAACACGTTGAAAGAATTCGTGATGTTGAACAATGGACTTGCGGGCTGTATTCCAGGGGAGATTGGGTTGCTTGGAAATGCCACAGTTGTGGATGTTTCATACAACAAATTGAGTGGGATCTTGCCCAAGAGCTTTGATGGGTTGAAGGGAGTGGAGGCGTTGGATATTTCTGGGAATTCGTTGACTGGGTTTGTGGCGGAGGGCGTTTGTAACTTGCCCAAATTGGTTAATTTCACATTCTCTAACAATTTCTTCAACGGCGAGGCCGAGAGTTGCGTGCCCCAGAACAGAAAGAACATTGTGTTGGATGATTCCAGCAATTGTTTGCCAGAGAGGCCGAACCAGAAGGCAGTGGAATTTTGTGCTCCAGTGATCCATAAGACCGTTGATTGCGGTAAGGCTAAATGCGGTGGAGGATCGTCATCGTCATCTCCATCCACATCGACGTCCATGCCACCGAATCCGGACCAGCCACAACCACCGAAGCAAGAGGTTCCCGAGATTGAGGCACCAAAATCATCCATAGTATCTGAGCCTGAAAGTCCACCATCAACTCCAGTGGATGATTCTCATGATCAATCGCCAGTCCCAAGATACCGACCTCCCCCGCCATTGGTTCACTCTCCACCACCACTTGTTCAGTCTCCTCCACCACCAATGCACTCTCCACCACCACTCATCCAATCTCCACCACCCGCACCAGTTCGCTCCCCACCACCACGCGTCCAATCTCCTCAACCACCCGTGCACTCTCTACCACCACCCGTCCAATCTCCACCACAGCCACCGGTGCACTCTCCACCACCACCCGTCCAATCTCCTCCACCACCGTCGGTTCAATCTCCACCACCACCCGTCCACTCTCCACCACCTCCGGTCCAATCTCCACCACCACCAGTGCACTCTCCACCACCGCCCGTCCACTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAGTCTCCACCACCACCAGTGCACTCTCCACCACCGCCCGTCCACTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAGTCTCCACCACCACCCGTGCACTCTCCACCACCTCCGGTCCAATCCCCACCCCCACCGATCCAATCTCCACCTCCATCGGTCCAATCTCCACCTCCACCCGTCCAATCTCCTCCACCACCCGTGCACTCTCCACCACCTCCGGTCCAATCTCCACCTCCACCCGTCCAATCTCCACCACCACCCATTCACTCCCCACCACCTCCAGTACAATCTCCTCTACCACCACCCGTCCAATCTCCTCCACCACCCGTTCACTCCCCACCACCTCCAGTCCAATCTCCCCCACCCCCACCCATTTTCTCTCCACCACCACCGGTATTCTCCCCACCCCCACCAGTTTTCTCTCCACCACCACCGGTATTCTCTCCCCCTCCTCCAGTGCACTTACCACCCCCTCCAGTGCACTCACCATCGCCTCCGGTCCATTCTCCGCCACCACCATCTCCTTCTCCCTCTCCTCCTCCGCCAGTCGCCTCTCCACCGCCTCCGCTAGAGGATATCGTTCTTCCACCAAATATTGGCTTCGAGTACTCATCGCCTCCTCCGCCATTGTTCCCGGGTTACTAA 2385 54.51 MKGPGCCLFISLLLLSSFLLFSSALSDAKVYSITHRQLLTLHENGDLLDDYESTIQVNETFSSPRLRRAYIALQAWKMAIYSDPLNTTASWIGADVCSYTGVFCAPALDDPKLEVVAGIDLNHADIAGYLPVELGLLTDIALFHINSNRFCGIIPTSFWRLTLLYEFDISNNRFVGHFPEVVVRIPNLKYLDLRFNDFEGELPSSLFTKELDAIFLNNNRFTSNIPENFGDSPASVIVIANNNFTGCIPSSIGKMGNTLKEFVMLNNGLAGCIPGEIGLLGNATVVDVSYNKLSGILPKSFDGLKGVEALDISGNSLTGFVAEGVCNLPKLVNFTFSNNFFNGEAESCVPQNRKNIVLDDSSNCLPERPNQKAVEFCAPVIHKTVDCGKAKCGGGSSSSSPSTSTSMPPNPDQPQPPKQEVPEIEAPKSSIVSEPESPPSTPVDDSHDQSPVPRYRPPPPLVHSPPPLVQSPPPPMHSPPPLIQSPPPAPVRSPPPRVQSPQPPVHSLPPPVQSPPQPPVHSPPPPVQSPPPPSVQSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVQSPPPPIQSPPPSVQSPPPPVQSPPPPVHSPPPPVQSPPPPVQSPPPPIHSPPPPVQSPLPPPVQSPPPPVHSPPPPVQSPPPPPIFSPPPPVFSPPPPVFSPPPPVFSPPPPVHLPPPPVHSPSPPVHSPPPPSPSPSPPPPVASPPPPLEDIVLPPNIGFEYSSPPPPLFPGY 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1563635 1566415 + MC11g_new0056 Mch11g0250 679184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0250 794 Gene3D Ribonuclease Inhibitor 69 235 IPR032675 -
Mch11g0250 794 MobiDBLite consensus disorder prediction 452 774 - -
Mch11g0250 794 MobiDBLite consensus disorder prediction 407 421 - -
Mch11g0250 794 MobiDBLite consensus disorder prediction 433 447 - -
Mch11g0250 794 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 543 IPR051582 -
Mch11g0250 794 SUPERFAMILY L domain-like 81 365 - -
Mch11g0250 794 FunFam Leucine-rich repeat extensin-like protein 1 70 231 - -
Mch11g0250 794 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Mch11g0250 794 Pfam Leucine rich repeat 284 339 IPR001611 GO:0005515(InterPro)
Mch11g0250 794 Gene3D Ribonuclease Inhibitor 236 377 IPR032675 -
Mch11g0250 794 PRINTS Pistil-specific extensin-like signature 755 776 IPR003882 -
Mch11g0250 794 PRINTS Pistil-specific extensin-like signature 654 672 IPR003882 -
Mch11g0250 794 PRINTS Pistil-specific extensin-like signature 620 643 IPR003882 -
Mch11g0250 794 MobiDBLite consensus disorder prediction 390 794 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0245 Mch-Chr11:1548519 Mch11g0250 Mch-Chr11:1563635 3.30E-164 dispersed
Mch11g0247 Mch-Chr11:1553378 Mch11g0250 Mch-Chr11:1563635 3.56E-164 dispersed
Mch11g0250 Mch-Chr11:1563635 Mch7g0650 Mch-Chr7:11166773 3.27E-58 dispersed
Mch11g0248 Mch-Chr11:1558881 Mch11g0250 Mch-Chr11:1563635 4.10E-144 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0250 - - - 0.0