Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0252 ATGGCGATCGCTTCTGATACTCTCTCCTCCATCCAGCAGCTCCTCGAGAGTCTTCACGCGCCGCCGTACGTGGCGGCGGCTGTTCTGGGTGGGGTGTCTCTGTTGCTTTCGGTGTTTGTGATCGGAGGTTGGAGGAAGAGACACCGGAATCTTCTGCCTCCGGTGCCGGCGATTCCGGGGCTGCCGGTGCTGGGGAATTTGCTGCAGTTGAAGGAGAAGAAGCCTCATAAGACGTTTGCTCGGTGGGCGGCGAAGTACGGCCCGGTCTATTCCATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCGCCGAAGTCGCCAAAGAGGCAATGGTGACGAGATACTCGTCCATTTCCAGTAGAAAACTAAGCAAAGCCCTCACAATCTTGACTTCTGATAAATGCATGGTTGCCATGAGCGATTACAATGATTTTCACAAGATGGCTAAGAGATACATATTAGCAAATGTCTTGGGAGCTAATGCTCAGAAGAGACACAGACAGAGGAGAGACACCATGATAGAGAATATTTCCAGCCACTTGTTTGCTCATGCGAAGGACTCTCCATCGCAATCTGTTAATTTTCGAGAAATCTTCGAATTGGAACTCTTTCGGCTTGCACTTAAAGAAACACTGGGGAGCGATATCGAGTCGATATATGTCAGTGAGCTCGGTACTACTGCACTGAGAGAAGATCTGTTCAGGATTTTAGTGATTGATCCAATGGAGGGTGCGATCGAAGTCGATTGGAGGGATTTCTTCCCATATCTGAGATGGATTCCCAACAAGGGTGTGGAGGATAAAATCAGGTCGATGGAGTATCGCAGGCGAGTGACGATGAAGAGCCTTATTGAGGAGTCGAAGAAGCGGATTGCAGCAGGGGAGGAAACGAATTCCTATGCTGAGTTCTTGTTATCTGAAGCAAAAACACTGACTGAGGATCAGATATCTATGTTGCTCTGGGAGACAATCATTGAAACCTCGGACACTACTTTGGTTGTGACAGAATGGGCTATGTATGAACTCGCTAAAGATCCTAAACGACAGGACTATCTATATCAGCACATACTGAGTGTGTGTGGATCTGCTAAGCTTAAAGAAGAGAACCTGGCGCAGCTTCCATATCTGACTGCTGTGTTTCATGAAACTCTTCGGAAGCACAGTCCAGTCCCGATCGTCCCATTGCGATACGCTCATGAAGATACCCAGTTAGGAGGGTTCTTTGTTCCTGCAGGAAGTGAGATTGCCGTGAACATTTACGGCTGCAACATGGACAAGGAACACTGGGAAAGCCCCGAGGAATGGAAGCCAGAGAGGTTTCTTGATGAGAAATATGACCCAATGGATCTGCACAAAACAATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTCAAGGCAAGCCTTGTAGCTTGCACAACCATTGGAAGGCTGGTTCAAGAGTTCGAGTGGAAGCTCGGGGGCGGGGAAGAAGACAAGGTCGACACTCTCGGCCTCACTGCTCGCAAGCTCCAACCGCTGCACGCAATCGTAAAGCCAAGAACCAACTAA 1560 49.36 MAIASDTLSSIQQLLESLHAPPYVAAAVLGGVSLLLSVFVIGGWRKRHRNLLPPVPAIPGLPVLGNLLQLKEKKPHKTFARWAAKYGPVYSIRTGASTVIVLNTAEVAKEAMVTRYSSISSRKLSKALTILTSDKCMVAMSDYNDFHKMAKRYILANVLGANAQKRHRQRRDTMIENISSHLFAHAKDSPSQSVNFREIFELELFRLALKETLGSDIESIYVSELGTTALREDLFRILVIDPMEGAIEVDWRDFFPYLRWIPNKGVEDKIRSMEYRRRVTMKSLIEESKKRIAAGEETNSYAEFLLSEAKTLTEDQISMLLWETIIETSDTTLVVTEWAMYELAKDPKRQDYLYQHILSVCGSAKLKEENLAQLPYLTAVFHETLRKHSPVPIVPLRYAHEDTQLGGFFVPAGSEIAVNIYGCNMDKEHWESPEEWKPERFLDEKYDPMDLHKTMAFGGGKRVCAGALKASLVACTTIGRLVQEFEWKLGGGEEDKVDTLGLTARKLQPLHAIVKPRTN 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 1568529 1573218 + MC11g0195 Mch11g0252 679186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0252 519 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 24 518 IPR044225 GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro)
Mch11g0252 519 FunFam Ent-kaurene oxidase 2 47 519 - -
Mch11g0252 519 Pfam Cytochrome P450 59 499 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 Gene3D Cytochrome P450 45 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0252 519 CDD CYP77_89 85 511 - -
Mch11g0252 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0252 Mch-Chr11:1568529 Mch5g1309 Mch-Chr5:13961575 1.80E-52 dispersed
Mch11g0252 Mch-Chr11:1568529 Mch3g1405 Mch-Chr3:16549600 4.96E-41 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0252 K04122 - csv:101209283 872.848