Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0274 ATGTCCACAAGGAGTGAACATCATACAGTCCCGCTCTCTGTGCTCCTGAAGCGTGAATTGGCTATTGAGAAGATTGAGAGACCGGAAATCATACATGGTCAAGCGGGTCAGAGTAAGAAAGGGGAGGATTTTACATTGCTAAAGACGGAATGCGAGAGAGTGGTCGGAGATGGAGTCTCTACATATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATTCAAAGGAGAATCTTTTGAACAATGTTTTAGCTGCTATTCCCTCAGATCTCAACAGAGATGAATGGATTGCAGCATTGCCAAGGGCCTTGGTTGCAGGCTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACTACCGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGTGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGGTATCTACTACTTATCAGCAGATCATAGACTAGAATGCAATGAAGAAGAGAGAGAACGTATAATTGCTAGTGGTGGTGAGGTGGGCCGGCTGAATACTGGGGGTGGTGCTGAGATTGGCCCATTGAGATGTTGGCCCGGTGGTTTGTGTCTATCGCGATCAATTGGTGATATGGATATTGGCGAGTTTATAGTACCTGTTCCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACAGCCTATGATTGTTGTCGTGGGATGTCAGCAGAGACTGCTGCTGCACAAATTGTGAAAGAAGCAGTGCAGTCAAAGGGACTTAGAGATGATACTACATGTATTGTGATTGACATATTACCAAGGGATAAACCACCTTCTGCTTTACCACCACCAAAGAAGCAGGGAAAGGGAATGTTTAAATCTATGTTCCGCAAAAGGACTTCTGAATCATCTTCTCATTTTGAGAAGGAATATATGGAGCCGGATGTTGTTGAGGAATTATTTGAGGAAGGATCAGCTATGCTATCAGAAAGGTTAGATGCCAAGTATCCCATCTGCAACATGTTTAAGCTGTTCATATGTGCAGTATGCCAAGTGGAGATCCAACCTCGGGAGGGTGTTTCCATATATGCCGGCTCATCTAACCGGGGAAAATTGCGGGCTTGGGATGGACCTTTCCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCATCTGGAGACACAACAGCAGTGGAAGTGACTAGCCTACTCTTCAGCTACACTTCATTGTGGGTGAAC 1320 44.47 MSTRSEHHTVPLSVLLKRELAIEKIERPEIIHGQAGQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYSKENLLNNVLAAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGGIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMSAETAAAQIVKEAVQSKGLRDDTTCIVIDILPRDKPPSALPPPKKQGKGMFKSMFRKRTSESSSHFEKEYMEPDVVEELFEEGSAMLSERLDAKYPICNMFKLFICAVCQVEIQPREGVSIYAGSSNRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGDTTAVEVTSLLFSYTSLWVN 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1726686 1731718 + MC11g0217 Mch11g0274 679208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0274 440 PANTHER PROTEIN PHOSPHATASE 36 292 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch11g0274 440 SMART PP2C_SIG_2 46 293 IPR001932 -
Mch11g0274 440 Gene3D - 31 298 IPR036457 -
Mch11g0274 440 SMART PP2C_4 17 291 IPR001932 -
Mch11g0274 440 Pfam Protein phosphatase 2C 54 279 IPR001932 -
Mch11g0274 440 SUPERFAMILY PP2C-like 34 293 IPR036457 -
Mch11g0274 440 FunFam probable protein phosphatase 2C 12 32 299 - -
Mch11g0274 440 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Mch11g0274 440 CDD PP2Cc 36 293 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0274 Mch-Chr11:1726686 Mch6g2791 Mch-Chr6:29345587 2.35E-171 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0274 - - - 0.0