Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0318 ATGAATAACACGAATTCCGTCTGTAATCCTATGGACGCTCTGCCATTATTGCCTTACTCGCATCTTCTTTTTTCGAATAACTCCATCGATTTCAGGCACAGGGTTTCCATTGCAGTAAAACCGGCTTTTCCGGCCACCGGTTCGTGTAGATGGCGAATCCGAGCCACCGCCGCGAACGGAGTTTCATCGGCGTCGACATCCGAGATCGACATGGTGAGGAACAGAGAGGGCGTTTTTACAGCCAAACATAGCAAGGTCGTCGTGCTTTGGGACCTCGACAACAAGCCCCCTCGTGGCCCGCCGTACGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAACGCTTCGGGCACGTGGTCGACATGTCGGCTTACGCCAATCGCCACGCCTTCATCCATTTGCCGCAATGGGTTGTCGAGGAACGCCGCGAGCGACGCCAATTGGATATCCTTGAACGCAAAGGGTTGATCTCGCCGTCCGAGTCGTACGTCTGTGGGGTTTGTGGCCGTAAGTGCAAAACCAATCTAGACCTCAAGAAGCACTTCAAGCAACTCCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGATCTCTGAAGGGCAAAAAGCGTCAGCGTTACAAGGAAAGGTTCATATCCGGAAACGAAAAGTACAATGAAGCGGCGAGGTCTCTAATTACTCCGAAAGTTGGGTATGGGTTGGCCTCGGAATTGAGACGTGCTGGGGTTTTTGTGAAGACGGTGGAGGATAAGCCGCAGGCGGCGGATTGGGCTTTGAAGAGACAGATGCAGCACTCGATGAGTCGGGGTATTGATTGGATGTTTCTCGTTTCGGATGATTCGGATTTTTCAGAGATGTTAAGGAAGGCTAAGGATGCTAATTTGGGGACTGTGGTGGTCGGGGATCGAGATAGGGCGTTGGGTAGGCACGCTGATTTATGGGTTCCATGGATAAGCGTGGAAAGTGGGAATGTTACAGAGGAGGATCTGGTGCCCAAGAGATGGAGGACGAGTAGAAGCGAGGAGGGTTTGGATGAAGACGATGGTTTTTCAGTTTCTCGTTTTTATGGAGACATTGAAGCTGGTAGCGATTTGGAAAGTGTAGTGGAAGAGCTTGCTTCCTCAAGTACAGGGTTCAATGGCTTTAGAATTTCTGCATTTTCTGAAGGGGAAGATGAGGCAGAAGAAGATGAATGGGCTGAAGAGGATGTGGCACCTGACTATCTGCTAGAGATGAGTGACGAGGAAGATGGGTATTTC 1260 50.95 MNNTNSVCNPMDALPLLPYSHLLFSNNSIDFRHRVSIAVKPAFPATGSCRWRIRATAANGVSSASTSEIDMVRNREGVFTAKHSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGHVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLISPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFISGNEKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKDANLGTVVVGDRDRALGRHADLWVPWISVESGNVTEEDLVPKRWRTSRSEEGLDEDDGFSVSRFYGDIEAGSDLESVVEELASSSTGFNGFRISAFSEGEDEAEEDEWAEEDVAPDYLLEMSDEEDGYF 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1966448 1967707 - MC11g0243 Mch11g0318 679252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0318 420 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 49 398 - -
Mch11g0318 420 ProSitePatterns Zinc finger C2H2 type domain signature. 164 185 IPR013087 -
Mch11g0318 420 ProSiteProfiles Zinc finger C2H2 type domain profile. 162 190 IPR013087 -
Mch11g0318 420 MobiDBLite consensus disorder prediction 388 420 - -
Mch11g0318 420 Coils Coil 182 202 - -
Mch11g0318 420 MobiDBLite consensus disorder prediction 390 420 - -
Mch11g0318 420 CDD PIN_LabA-like 172 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1522 Mch-Chr10:15175109 Mch11g0318 Mch-Chr11:1966448 3.01E-68 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42556 None None None None Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0318 - - - 0.0