Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0329 | ATGAGAAACTATAGGATGGCAAAACGGCATTGTTATCCAATTTCAATTGCACACTCGATTTCTTCAGGGTATCAAAACTCTTCCTCAATTCTTCTTGATTCCCTGTACTGCTTGGAAGAGCAGTGGGAGGAGGAACCCAAGCACGAAGCTAACTCAGTATTAAATGTTAATATCCACTCCCCAAACTCCGTCGTTTTGTCGGAGAGGGACTTTCTCTGGGAGGACGAGGAGCTGGTCTCTCTGTTCTCAAAGGAGACCAAAAATAAGCTCCACAACACTCTCCCACAAAATCCCCTTCTTGCCGCGGCTCGAGCCAAGGCTGTGGACTGGATACTAAAGGTTAATGCCCACTACTCTTTCACTGCCCTCACCGCCGTTTTAGCCGTTGATTATGTCGACAGATTTCTGTCCAGCCCCCACTTTCAGATTGGCAAGCCCTGGATGACCCATCTCACCGCAATTGCTTGTTTATCTCTTGCCGCCAAGGTGGAGGAAACCCAAGTTCCCCTTCTCTTAGACCTTCAGGTTGAGGAAAATGAGTACTTTTTCGAAGCGAAGACGATTAAAAGAATGGAGATTCTTGTTCTCTCTACGCTTCTTTGGAGAATGAATCCGGTGAACCCACTTTCCTTTCTTGATTATATTGTAAGACGGCTCGGTTTGAAGGACCAGCTCTGTTCAGAATTTCTCTGTAGATGTGAGCGATTACTTCTCTCTGTCATTTTAGATTCTAGATTCGTATGTTTTCTTCCATCGGTAATGGCAAGCGCCATTATGCTTCGAGTTATCAACGACGTAGAACCCTGCGTCGCCGTTAAATACCACGACCAGCTTCTGGGTTTTCTTCAAGTCGACAAGGATAAGGTAGAGGATTGCTCGCGGTTCATCACGGAAGCATCCAGAGGACACATAAACGAATTTGAATTTAAGAAACGAAGATTTGGTTCAATCGACATGTCGTGTGTCTCAAACGGTCGGAATCGGAATGTCGACTCGCCGGAGGCAGCAACTAAGAAGAGTAAGGTTGATGAACAGCCACGGTAG | 1044 | 46.07 | MRNYRMAKRHCYPISIAHSISSGYQNSSSILLDSLYCLEEQWEEEPKHEANSVLNVNIHSPNSVVLSERDFLWEDEELVSLFSKETKNKLHNTLPQNPLLAAARAKAVDWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIGKPWMTHLTAIACLSLAAKVEETQVPLLLDLQVEENEYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCERLLLSVILDSRFVCFLPSVMASAIMLRVINDVEPCVAVKYHDQLLGFLQVDKDKVEDCSRFITEASRGHINEFEFKKRRFGSIDMSCVSNGRNRNVDSPEAATKKSKVDEQPR | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2026838 | 2039505 | + | MC11g0254 | Mch11g0329 | 679263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0329 | 347 | Pfam | Cyclin, N-terminal domain | 90 | 204 | IPR006671 | - | |
Mch11g0329 | 347 | CDD | CYCLIN_AtCycD-like_rpt1 | 103 | 201 | - | - | |
Mch11g0329 | 347 | ProSitePatterns | Cyclins signature. | 104 | 135 | IPR048258 | - | |
Mch11g0329 | 347 | MobiDBLite | consensus disorder prediction | 328 | 347 | - | - | |
Mch11g0329 | 347 | Pfam | Cyclin, C-terminal domain | 206 | 313 | IPR004367 | - | |
Mch11g0329 | 347 | FunFam | D6-type cyclin | 87 | 204 | - | - | |
Mch11g0329 | 347 | SUPERFAMILY | Cyclin-like | 73 | 204 | IPR036915 | - | |
Mch11g0329 | 347 | CDD | CYCLIN_AtCycD-like_rpt2 | 206 | 292 | - | - | |
Mch11g0329 | 347 | Gene3D | - | 205 | 293 | - | - | |
Mch11g0329 | 347 | FunFam | CYCLIN D32 | 205 | 294 | - | - | |
Mch11g0329 | 347 | SMART | cyclin_7 | 109 | 197 | IPR013763 | - | |
Mch11g0329 | 347 | Gene3D | - | 95 | 204 | - | - | |
Mch11g0329 | 347 | SMART | Cyclin_C_2 | 206 | 328 | IPR004367 | - | |
Mch11g0329 | 347 | PANTHER | CYCLINS | 76 | 261 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Mch11g0329 | 347 | MobiDBLite | consensus disorder prediction | 332 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0329 | Mch-Chr11:2026838 | Mch4g0724 | Mch-Chr4:4900652 | 3.22E-79 | dispersed | |
Mch1g1237 | Mch-Chr1:14685965 | Mch11g0329 | Mch-Chr11:2026838 | 1.16E-79 | wgd | |
Mch10g0481 | Mch-Chr10:3122085 | Mch11g0329 | Mch-Chr11:2026838 | 5.26E-89 | wgd | |
Mch11g0329 | Mch-Chr11:2026838 | Mch8g0665 | Mch-Chr8:4726293 | 1.04E-111 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0329 | K14505 | - | csv:101218302 | 491.886 |