Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0329 ATGAGAAACTATAGGATGGCAAAACGGCATTGTTATCCAATTTCAATTGCACACTCGATTTCTTCAGGGTATCAAAACTCTTCCTCAATTCTTCTTGATTCCCTGTACTGCTTGGAAGAGCAGTGGGAGGAGGAACCCAAGCACGAAGCTAACTCAGTATTAAATGTTAATATCCACTCCCCAAACTCCGTCGTTTTGTCGGAGAGGGACTTTCTCTGGGAGGACGAGGAGCTGGTCTCTCTGTTCTCAAAGGAGACCAAAAATAAGCTCCACAACACTCTCCCACAAAATCCCCTTCTTGCCGCGGCTCGAGCCAAGGCTGTGGACTGGATACTAAAGGTTAATGCCCACTACTCTTTCACTGCCCTCACCGCCGTTTTAGCCGTTGATTATGTCGACAGATTTCTGTCCAGCCCCCACTTTCAGATTGGCAAGCCCTGGATGACCCATCTCACCGCAATTGCTTGTTTATCTCTTGCCGCCAAGGTGGAGGAAACCCAAGTTCCCCTTCTCTTAGACCTTCAGGTTGAGGAAAATGAGTACTTTTTCGAAGCGAAGACGATTAAAAGAATGGAGATTCTTGTTCTCTCTACGCTTCTTTGGAGAATGAATCCGGTGAACCCACTTTCCTTTCTTGATTATATTGTAAGACGGCTCGGTTTGAAGGACCAGCTCTGTTCAGAATTTCTCTGTAGATGTGAGCGATTACTTCTCTCTGTCATTTTAGATTCTAGATTCGTATGTTTTCTTCCATCGGTAATGGCAAGCGCCATTATGCTTCGAGTTATCAACGACGTAGAACCCTGCGTCGCCGTTAAATACCACGACCAGCTTCTGGGTTTTCTTCAAGTCGACAAGGATAAGGTAGAGGATTGCTCGCGGTTCATCACGGAAGCATCCAGAGGACACATAAACGAATTTGAATTTAAGAAACGAAGATTTGGTTCAATCGACATGTCGTGTGTCTCAAACGGTCGGAATCGGAATGTCGACTCGCCGGAGGCAGCAACTAAGAAGAGTAAGGTTGATGAACAGCCACGGTAG 1044 46.07 MRNYRMAKRHCYPISIAHSISSGYQNSSSILLDSLYCLEEQWEEEPKHEANSVLNVNIHSPNSVVLSERDFLWEDEELVSLFSKETKNKLHNTLPQNPLLAAARAKAVDWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIGKPWMTHLTAIACLSLAAKVEETQVPLLLDLQVEENEYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCERLLLSVILDSRFVCFLPSVMASAIMLRVINDVEPCVAVKYHDQLLGFLQVDKDKVEDCSRFITEASRGHINEFEFKKRRFGSIDMSCVSNGRNRNVDSPEAATKKSKVDEQPR 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2026838 2039505 + MC11g0254 Mch11g0329 679263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0329 347 Pfam Cyclin, N-terminal domain 90 204 IPR006671 -
Mch11g0329 347 CDD CYCLIN_AtCycD-like_rpt1 103 201 - -
Mch11g0329 347 ProSitePatterns Cyclins signature. 104 135 IPR048258 -
Mch11g0329 347 MobiDBLite consensus disorder prediction 328 347 - -
Mch11g0329 347 Pfam Cyclin, C-terminal domain 206 313 IPR004367 -
Mch11g0329 347 FunFam D6-type cyclin 87 204 - -
Mch11g0329 347 SUPERFAMILY Cyclin-like 73 204 IPR036915 -
Mch11g0329 347 CDD CYCLIN_AtCycD-like_rpt2 206 292 - -
Mch11g0329 347 Gene3D - 205 293 - -
Mch11g0329 347 FunFam CYCLIN D32 205 294 - -
Mch11g0329 347 SMART cyclin_7 109 197 IPR013763 -
Mch11g0329 347 Gene3D - 95 204 - -
Mch11g0329 347 SMART Cyclin_C_2 206 328 IPR004367 -
Mch11g0329 347 PANTHER CYCLINS 76 261 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch11g0329 347 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0329 Mch-Chr11:2026838 Mch4g0724 Mch-Chr4:4900652 3.22E-79 dispersed
Mch1g1237 Mch-Chr1:14685965 Mch11g0329 Mch-Chr11:2026838 1.16E-79 wgd
Mch10g0481 Mch-Chr10:3122085 Mch11g0329 Mch-Chr11:2026838 5.26E-89 wgd
Mch11g0329 Mch-Chr11:2026838 Mch8g0665 Mch-Chr8:4726293 1.04E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0329 K14505 - csv:101218302 491.886