Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0338 | ATTGTACCATCCATGGAAGAGATATTACAGTTCTCTCGTTTCCTCGTCCCTCTCGCACTTCTATTTGCTCTTATTCATGTCTTCAACTTCAAATTCAAAAAAGTTAGCTCAAAAAATCTACCACCGGCGCCACCTTCCCTTCCTGTAATCGGCCACCTCCATCTCCTAAGAGAGCCATTCCACCAAATGTTGCAAAATCTCTCTCAAAGATACGGTCCAATCCTATCGCTCTCGCTCGGTTTCCGCTCGGTGGTGGTCGTATCCTCCCCCATCGCTGCCCAAGAGTGCTTTACAAAAAATGACATCGTTTTTGCCAACCGCCCTCGAATGATTTCGGGCAAGATCCTAAACTACAACTACACAACCATAGGGGCTACCGCCTATGGTCAACATTGGCGCATTATGCGGCGCATTGCCACAACGGAGCTACTCTCCACTCATCGACTCATCTCCTTCATTAACCTCCGACAGGAGGAGGTCAAATTATGGCTAAAAAATTTGTATCGAACCACTGGCCAAAATAACGTGCGAGTGGAGATAAGGTCTAGACTGACGGAACTGTCGTTCAACATTGTTTTGAGGATGATGACTGGGAAGCGATATTTCGGGGTTGAAGTGAAAGATTCTGAGGAGGAGAGGGAGTTGAAGAAAGTGATGAAGGAAGTTTCTCTACTAAGTGGGATGTCGTATCCAGCTGATTTTTTGTCGGTCTTAAGACTGATTGATTATCAAGGATTTAGAAAGAGGTTGTGGAAAGTTTGGGCGGGTGCCGATGGTTTTGTACAAAGTTTGATCGATGGTCGTCGTGAAATGAAAGCTTCGTGTTCTTTTTCACTAGAGGAAAATTGGAAGAATATGATTGATACTATGTTGTCGTTGCAAGACTCCGACCCTGATTATTATAAAGATCATATTATCAAGGGTCAAATTTTGACCCTGTTGGCTGCTGGAACTGACACGACCGCGGGAACAATAGAGTGGGGGATGTCGCTACTCCTCAACCATCCAACAGCAATGAAGAAGGCATGGAGTGAGATAAATGATTACGTCGGAGAGCAGCGGTTGGTGGAGGAAGCCGATCTTGCCAACCTACCATATCTTCAGGCCATAATCAACGAAACCTATCGGATGTTTCCAGCACTCCCAATATTGGTGCCACGCGAATCGTCAGAAGACTGCACAATCGGAGGGTACGATGTTCCAAAAGGAACAATGTTGGTGGTGAATGCGTGGGCCATCCATCGAGACCCCAAAGTGTGGGAGGACCCAACGAGATTCCGGCCAGAGAGGTTTGAAAATGGGAAAATTGTGGAAGTGAATAAGTTGCTGCCATTTGGAATGGGGAGGAGGACGTGTCCAGGGGCTGGCCTCGCCCATAGGGTCGTGGGCTTGGCATTGGCCACTCTCATTCAATGCTTCGAGTGGGACAAAAACGGCCCAAATGAAATTGACTTATCTCAAGGAAATGGACTCACCATGCCCAAAGCTCAACCTTTGGAGGCAATGTGCAAGCCTCAAGAGAACTGCAACAAAAACATAATATTCAAAATTCATATATCCATGGAATCAGAGACGTGGTTCTCCCATTTCCTCATCCCTCTCGCGCTTCTCATTTTTGCTCTTCTCGTCGTCATTTCCAAACTCAGAAAAGTAAGCCACAAAAACCTTCCACCAAGCCCACCTTCCTTTCCGGTCATCGGTCACCTCCATCTTCTCCGAAACCCATTCCACCGAGTGCTACACAATCTCTCCGATAAGTACGGCCCAATTTTATCCCTTACAATCGGTTCCCGGCCGGTGGTGGTTATAACCTCCCCCACCGCCGTCCAGGAGTGCTTCACCAAAAACGACGTCGTTTTCGCCAACCGCCCTCGCCTGCTCTCGGGCAAGTACATCAACTACAACTACACGGCGGTGGGATTCGCCCCCTACGGCCCGCACTGGCGCAACATGCGCCGCCTCGCCACCACCGAGCTACTCTCCAACCACCGCCTCAACACATTTCTCAACGTCCGAGTGCAGGAGCTCAAGTTGTGGGTCAAAAATTTGTACCGATATTTAGTAAGCAACGACGAGAGTGATAATAATTTTGTTAGAGTGGAGATGAAGTCGAGACTGAACGATCTGTCGTTCAACACGCTGATGAGGATGGTGAGTGGGAAACGGTATTACGGTGATGAGGTGGAGGACGTTGAGGAGGCGAGGGAGTTCAGGGAGATCATGAAGGAGCTTCTTCGGCTGAGTGGGGCGTCGAATCCAGCGGATTTTTTGCCAGTTTTAAGGGTGTTTGATTATCAGGGGCTTGAAAAGAGGATGCTGAAAGCGAATCAGCGATCAGATTCGTTCTTACAACGTCTGACTGATAGGCAACGGGAAAGGAGAAGTTGGCGCCGCCAGGACGAAGATCATGGAAAGAACATGATTGATGGTCTGCTGTCGTTGCAAGAATCGGAACCTCAGTATTACTCCGATGATATTATCAAGGGTCATGTTTTGACCATACTAGCGGCTGGAACTGACACAACAACGGGAACAATCGAATGGGCGATGTCGCTACTGCTGAACCATCCAGCGGTGATGAAGAAGGCGTGGACCGAGATAAGCGAGTGCGTGGGCGAGCATCGGCTGGTGGAGGAGGCGGATCTCAACAAGCTACAGTATCTTCAAGCCATAATCACGGAGACCCTGCGGTTGTTTCCGGCCGCCCCGCTGTTGGTCCCACACGAGTCCTCCGAGGACTGCACAGTCCAAGGATTCCACATTCCCATAGGCACAATGTTGATTGTCAACGCGTGGGGCATCCACCGGGACCCCAAACTGTGGGACAATCCCACCAGCTTCCGACCGGAGAGGTTTCAGAAATGGGAAGAAGAATCGAACCAGTGGGTGCCGTTTGGGGTGGGGAGGAGAGCGTGCCCAGGAGCTGCGCTCGCCCACCGGGTCGTCGGACTCACGTTGGCCACTCTGATTCAGTGCTTCCATTGGGAGAGGCTCGGTGAACAGGAGATTGACTTGTCTGAAGGAACTGGAATCACCATGCCCAAGGCCAACCCCTTGGAGGCACTCTTCAAACCT | 3075 | 49.89 | IVPSMEEILQFSRFLVPLALLFALIHVFNFKFKKVSSKNLPPAPPSLPVIGHLHLLREPFHQMLQNLSQRYGPILSLSLGFRSVVVVSSPIAAQECFTKNDIVFANRPRMISGKILNYNYTTIGATAYGQHWRIMRRIATTELLSTHRLISFINLRQEEVKLWLKNLYRTTGQNNVRVEIRSRLTELSFNIVLRMMTGKRYFGVEVKDSEEERELKKVMKEVSLLSGMSYPADFLSVLRLIDYQGFRKRLWKVWAGADGFVQSLIDGRREMKASCSFSLEENWKNMIDTMLSLQDSDPDYYKDHIIKGQILTLLAAGTDTTAGTIEWGMSLLLNHPTAMKKAWSEINDYVGEQRLVEEADLANLPYLQAIINETYRMFPALPILVPRESSEDCTIGGYDVPKGTMLVVNAWAIHRDPKVWEDPTRFRPERFENGKIVEVNKLLPFGMGRRTCPGAGLAHRVVGLALATLIQCFEWDKNGPNEIDLSQGNGLTMPKAQPLEAMCKPQENCNKNIIFKIHISMESETWFSHFLIPLALLIFALLVVISKLRKVSHKNLPPSPPSFPVIGHLHLLRNPFHRVLHNLSDKYGPILSLTIGSRPVVVITSPTAVQECFTKNDVVFANRPRLLSGKYINYNYTAVGFAPYGPHWRNMRRLATTELLSNHRLNTFLNVRVQELKLWVKNLYRYLVSNDESDNNFVRVEMKSRLNDLSFNTLMRMVSGKRYYGDEVEDVEEAREFREIMKELLRLSGASNPADFLPVLRVFDYQGLEKRMLKANQRSDSFLQRLTDRQRERRSWRRQDEDHGKNMIDGLLSLQESEPQYYSDDIIKGHVLTILAAGTDTTTGTIEWAMSLLLNHPAVMKKAWTEISECVGEHRLVEEADLNKLQYLQAIITETLRLFPAAPLLVPHESSEDCTVQGFHIPIGTMLIVNAWGIHRDPKLWDNPTSFRPERFQKWEEESNQWVPFGVGRRACPGAALAHRVVGLTLATLIQCFHWERLGEQEIDLSEGTGITMPKANPLEALFKP | 1025 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2084976 | 2111930 | - | MC11g0263 | Mch11g0338 | 679272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0338 | 1025 | Gene3D | Cytochrome P450 | 27 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | Gene3D | Cytochrome P450 | 542 | 1021 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 889 | 907 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 972 | 995 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 584 | 603 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 608 | 629 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 846 | 872 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 962 | 972 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 826 | 843 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 709 | 727 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | E-class P450 group I signature | 930 | 954 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | SUPERFAMILY | Cytochrome P450 | 41 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | CDD | CYP81 | 588 | 1019 | - | - | |
| Mch11g0338 | 1025 | SUPERFAMILY | Cytochrome P450 | 557 | 1025 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | CDD | CYP81 | 72 | 499 | - | - | |
| Mch11g0338 | 1025 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0338 | 1025 | FunFam | Cytochrome P450 family protein | 32 | 509 | - | - | |
| Mch11g0338 | 1025 | Pfam | Cytochrome P450 | 41 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | Pfam | Cytochrome P450 | 557 | 1016 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | P450 superfamily signature | 890 | 901 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | P450 superfamily signature | 963 | 972 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PRINTS | P450 superfamily signature | 837 | 854 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0338 | 1025 | PANTHER | CYTOCHROME P450 82C3-RELATED | 538 | 1025 | IPR050651 | - | |
| Mch11g0338 | 1025 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 965 | 974 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0338 | 1025 | FunFam | Cytochrome P450 family protein | 548 | 1025 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0338 | Mch-Chr11:2084976 | Mch2g1289 | Mch-Chr2:9026838 | 0 | dispersed | |
| Mch2g1282 | Mch-Chr2:8932554 | Mch11g0338 | Mch-Chr11:2084976 | 1.25E-76 | dispersed | |
| Mch9g1841 | Mch-Chr9:20224563 | Mch11g0338 | Mch-Chr11:2084976 | 2.49E-58 | dispersed | |
| Mch11g0338 | Mch-Chr11:2084976 | Mch11g0343 | Mch-Chr11:2132838 | 6.10E-153 | proximal | |
| Mch11g0807 | Mch-Chr11:5423151 | Mch11g0338 | Mch-Chr11:2084976 | 1.73E-213 | transposed | |
| Mch11g0826 | Mch-Chr11:5574183 | Mch11g0338 | Mch-Chr11:2084976 | 4.85E-160 | transposed | |
| Mch1g1246 | Mch-Chr1:14737877 | Mch11g0338 | Mch-Chr11:2084976 | 2.91E-169 | wgd | |
| Mch11g0338 | Mch-Chr11:2084976 | Mch2g1281 | Mch-Chr2:8924736 | 2.02E-166 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0338 | - | - | - | 0.0 |