Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0343 ATGCATAGCAAAATATTGGCAGCCATGGGAGCAATCTTTTTATACTTCCCACTGTTCTTAGTGTTGTATATATTAACGGAGCACTTCCTCCACAAGATCAGAAACCTGCCGCCGACCCCTTTCCCCTCGCTCCCACTCATCGGCCATCTCTACCTCTTGAACAAACCCATCTACCGGACTCTCGCCGACATCTCGAACCGGCACGGTCCGGTTGTGTTTCTCCAGTTCGGCTCCCGGCCGGTTCTCGTGGTGTCGTCCCCTTCCGTAGCCGAAGAATGCCTGACCAAGAACGACGTCGTGTTCGCCAACCGCCCCCGTCTCCTCATATCCAAGTGCTTCGGGTACAACAACACGAATCTCGTGTGGTCCTCGTATGGGGACCACTGGCGCAGCCTCCGCCGAATCTCCACCGTTGAAGTCCTGTCCACCCACCGGCTCCAGATTCTCTCCACCGTCCGTCTGGAGGAGGTGAGGTCCTTGATTCGGAAGCTCGCAAAAAGTGAAAACCAGGACAAAATTCTCACCATGAGGCATTCGTTTTTCGATCTGACTTTCAACGTGATGCTGAGGATGATCGCCGGAAAGCGATTCTACGGCGATGACGTGGACGACGCCGACGAGGATGCGAAGATATTCAGGGAGTTGCAGGCGGAATCGACTCGATTGACCGGCATATCAAACATTGGAGATTTTGTGCCGATGATGACGTGGCTGGGATTTGGATGGAGCGTGGAGAAGAAGATGATGGATTGCCACTACAAGAGAGACGCGTTTATGCAGACTTTGATCGAGGAGCAACGGAAAAGATCAACGGCTGAAACTGAAAGTGAAATTGATGATTCGTTTCGCGATGGAAGGAGGAAGACGATGATTGAAGTGCTGCTGGAACTGCAAGAATCGGAACCTGACCACTACACCGACGAATCGATTAAAGCCTTGATGCTTGTTCTATTAACGGCAGGTACGGAGACCTCTGTGAACACCATGGAGTGGGCCCTATCTCTTCTACTGAACCATCCAGAAGTTTTAAAGAAGGCGCAGGTCGAAATTGATGATCAAGTTGGCCAGGACCGTCTGATTGACGAATCAGACATGGCCCACCTTCCTTACTTACGTGGCATAATCAACGAGACCTTCAGAATGTACCCTCCGGCTCCACTAATGGTACCTCACCAATCATCAGAAGACTGCAGTGTCGGAGGGCACCACATCCCACGTGGGACTATGCTATACGTCAATCTATGGGCCATCCACAACGACCCCAAGATTTGGGCCAACCCGACAAAGTTTGATCCCGACAGGTTTGACAGGCTGGAAAGTGACAAGTACGGGTACGGGTTCAATCTGATGCCGTTCGGGTCGGGTAGAAGGGGGTGTCCAGGAGAGGGACTGGGCCTGCGGATCATTGGGCTGGTGTTGGGCTCACTGATCCAGTGCTTTGAATGGGAGCGTCCTGGTGAGAAGTTGGTTGACATGACAGAAGGCATTGCAGTCTCTATGCCCAAGGCCCAACCATTGCAGGCTAAATGCAGGCCTCGGCCCATAATTGCTAACCTTCCATCTCAAACCAAAACCAACCAGGCCCATTGA 1590 52.2 MHSKILAAMGAIFLYFPLFLVLYILTEHFLHKIRNLPPTPFPSLPLIGHLYLLNKPIYRTLADISNRHGPVVFLQFGSRPVLVVSSPSVAEECLTKNDVVFANRPRLLISKCFGYNNTNLVWSSYGDHWRSLRRISTVEVLSTHRLQILSTVRLEEVRSLIRKLAKSENQDKILTMRHSFFDLTFNVMLRMIAGKRFYGDDVDDADEDAKIFRELQAESTRLTGISNIGDFVPMMTWLGFGWSVEKKMMDCHYKRDAFMQTLIEEQRKRSTAETESEIDDSFRDGRRKTMIEVLLELQESEPDHYTDESIKALMLVLLTAGTETSVNTMEWALSLLLNHPEVLKKAQVEIDDQVGQDRLIDESDMAHLPYLRGIINETFRMYPPAPLMVPHQSSEDCSVGGHHIPRGTMLYVNLWAIHNDPKIWANPTKFDPDRFDRLESDKYGYGFNLMPFGSGRRGCPGEGLGLRIIGLVLGSLIQCFEWERPGEKLVDMTEGIAVSMPKAQPLQAKCRPRPIIANLPSQTKTNQAH 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2132838 2136855 + MC11g0266 Mch11g0343 679277

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0343 529 SUPERFAMILY Cytochrome P450 37 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 Gene3D Cytochrome P450 30 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 CDD CYP81 69 506 - -
Mch11g0343 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g0343 529 Pfam Cytochrome P450 38 502 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0343 529 PANTHER CYTOCHROME P450 82C3-RELATED 18 513 IPR050651 -
Mch11g0343 529 FunFam Cytochrome P450 family protein 29 516 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0343 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0343 Mch-Chr11:2132838 Mch11g0826 Mch-Chr11:5574183 9.10E-195 dispersed
Mch11g0338 Mch-Chr11:2084976 Mch11g0343 Mch-Chr11:2132838 6.10E-153 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g686 . . . . . . . Bma01g02256 . . . Cma09g00271 . . . Cpe06g00187 . Bhi04g00395 . . . . . Lcy13g2119 . . . . . . . . . . . . Csa04g02459 . . . . . . . . . . . . Cmo09g00267 . . . . . . Bhi09g03252 . . . . Mch11g0343 . . . . . . . . . . Chy07g00173 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477