Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0355 | ATGAGTTGCAACGGATGCAGAGTTCTTCGAAAGGGTTGCAGCGAAGGCTGTGTTCTAAGATCGTGTCTCCACTGGATTGATTCGCCGGAATCCCAAGGCAACGCCACCTTATTTCTCGCTAAATTTTTCGGCCGAAGCGATCTCTTGTCCTTCATCTCCGCCGTCCCCGATCACCAAAGACCTGCTTTGTTCCAGTCTCTGTTATTCGAAGCTTGCGGCCGCACGGTGAATCCGGTGAGCGGCGCCGTGGGGCTGTTATCGAGCGGGAACTGGCACGTGTGTCAGGCGGCGGCGGAGACAGTGCTCGGTGGGGGAGTTCTCCGGCCGATACCCGGAATCGATGTTTCTGGAAATTCGACGGGACACGTGGATGAATCGTCTGTCAGTTTCAGTACAGATGTGTGGACCACACAGAATCTCCAATTTTACCCCTCCGTTCCGTCCGATTATCGGCGGCTCTCCGATCTCGGCGGAGGAAAGAATCATTATCCTCAAATGGAGAATCGGAGATCGCTGGACTCGGAGGAGTCGGTGATGACCAGCTTCGGAAGCGGCGATCTCGGCGACGGCGACCGGCGGAAGGAGAGGAAGCTCTTAAACTTGTTCATCTGA | 612 | 55.39 | MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNSTGHVDESSVSFSTDVWTTQNLQFYPSVPSDYRRLSDLGGGKNHYPQMENRRSLDSEESVMTSFGSGDLGDGDRRKERKLLNLFI | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2185633 | 2187149 | - | MC11g0278 | Mch11g0355 | 679289 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0355 | 203 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 129 | - | GO:0010468(PANTHER) | |
Mch11g0355 | 203 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 100 | IPR004883 | - | |
Mch11g0355 | 203 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Mch11g0355 | 203 | MobiDBLite | consensus disorder prediction | 156 | 190 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0355 | Mch-Chr11:2185633 | Mch8g1294 | Mch-Chr8:9423086 | 7.30E-51 | dispersed | |
Mch1g1274 | Mch-Chr1:14957182 | Mch11g0355 | Mch-Chr11:2185633 | 2.33E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42559 | PF03195 | LOB | 5.60E-25 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0355 | - | - | - | 0.0 |