Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0355 ATGAGTTGCAACGGATGCAGAGTTCTTCGAAAGGGTTGCAGCGAAGGCTGTGTTCTAAGATCGTGTCTCCACTGGATTGATTCGCCGGAATCCCAAGGCAACGCCACCTTATTTCTCGCTAAATTTTTCGGCCGAAGCGATCTCTTGTCCTTCATCTCCGCCGTCCCCGATCACCAAAGACCTGCTTTGTTCCAGTCTCTGTTATTCGAAGCTTGCGGCCGCACGGTGAATCCGGTGAGCGGCGCCGTGGGGCTGTTATCGAGCGGGAACTGGCACGTGTGTCAGGCGGCGGCGGAGACAGTGCTCGGTGGGGGAGTTCTCCGGCCGATACCCGGAATCGATGTTTCTGGAAATTCGACGGGACACGTGGATGAATCGTCTGTCAGTTTCAGTACAGATGTGTGGACCACACAGAATCTCCAATTTTACCCCTCCGTTCCGTCCGATTATCGGCGGCTCTCCGATCTCGGCGGAGGAAAGAATCATTATCCTCAAATGGAGAATCGGAGATCGCTGGACTCGGAGGAGTCGGTGATGACCAGCTTCGGAAGCGGCGATCTCGGCGACGGCGACCGGCGGAAGGAGAGGAAGCTCTTAAACTTGTTCATCTGA 612 55.39 MSCNGCRVLRKGCSEGCVLRSCLHWIDSPESQGNATLFLAKFFGRSDLLSFISAVPDHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLGGGVLRPIPGIDVSGNSTGHVDESSVSFSTDVWTTQNLQFYPSVPSDYRRLSDLGGGKNHYPQMENRRSLDSEESVMTSFGSGDLGDGDRRKERKLLNLFI 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2185633 2187149 - MC11g0278 Mch11g0355 679289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0355 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 129 - GO:0010468(PANTHER)
Mch11g0355 203 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Mch11g0355 203 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mch11g0355 203 MobiDBLite consensus disorder prediction 156 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0355 Mch-Chr11:2185633 Mch8g1294 Mch-Chr8:9423086 7.30E-51 dispersed
Mch1g1274 Mch-Chr1:14957182 Mch11g0355 Mch-Chr11:2185633 2.33E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42559 PF03195 LOB 5.60E-25 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0355 - - - 0.0