Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0375 TCCATGGCCGCCATCGTCTTCCGCTCCTCTGTTTTCTTCCTTCTTCTTTTTAAGATCTTCTCCGCCACCGCCACCGCCACCGCCACCGCCGTGGGTTCTTACCGGAAGGTGAAGTTTCTGCCGGGATTCTCTGGTCCTCTGCCTTTCGTACTTGAAACTGGATACGTGGGCGTGGGCGAATCGGAGGAAGTGCAGCTTTTTTACTATTTTGTTGAATCGGAGGCCAATCCCGAAACGGATCCTCTGCTTCTGTGGCTCACCGGCGGCCCCGGATGCTCTGCTTTAACTTCGCTTGCCTTCGAAATTGGTCCTATAAGTTTTAAGGAAGAGCGATTCAATGGGAGTTTACCTCAAATAATCTCGAACCCCTACTCGTGGACAAAGTGGTTGGCTGATCATCCAGAATTTATGTCTAATTCATTCTACGTGGGTGGAGACTCATATGCTGGTATGATTGTTCCAGTTGTTGCTCAAAAAATCTTAGAAGGAAATAGCGATTGGCCATTTGTAAATTTTCAGGGTTATGTATTAGGAAATCCTGTCACTATTCGCAATTCAAATCAAAATTTTCAAGTTCCTTATGCTCATAGGATGACCCTCATCTCTGATGAATTATTTGAGTGGTTGACAACTAGTTGCAAAGGAGAATATGTAAACATCGATCCCAATAACGTAGAGTGCTTAAAACATTATGATACGTATGAAAAGTGTGTTTCAAAATTGGAAAAAGGATGTATTTTGTTGCCAAAATGTCCATTTGAGTCTCCAAAGCAAAAAGATGACCATGATCGAAGATCTCTCTATAACACTCCCAAAGTGTTCCTTGATCCCAAGCCACCACTTCCTTCTCTGGGTTGCGCTTCGTATAAGTATTTGCTTTCTTATGATTGGGCAAACGATGACCAAGTTCAAAGAGCACTTCACATACGTGAGGGAAGCATTGGAGAATGGATAAGATGTAAGAAAAAAGATTATCAATATGAAATTAAGAGCGTTTTTCCTTATCATGTGAACCTTAGTTCTAAAGGTTACCGGTCTTTGATCTATAGCGGGGATCATGATATGATGGTGCCATCTATGGACACTCAAGCATGGATCAAATCTTTGAATTATTCTATTGTTGATGATTGGAGGCCATGGTTCATCGAGGATCAAGTAGCTGGATACACAAGAACTTATGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGACATACAGCTGAATATACACGAAAAGAATGTAGCATCATGTTTAGTAGATGGATAATAGGAAAATCCTTA 1287 41.49 SMAAIVFRSSVFFLLLFKIFSATATATATAVGSYRKVKFLPGFSGPLPFVLETGYVGVGESEEVQLFYYFVESEANPETDPLLLWLTGGPGCSALTSLAFEIGPISFKEERFNGSLPQIISNPYSWTKWLADHPEFMSNSFYVGGDSYAGMIVPVVAQKILEGNSDWPFVNFQGYVLGNPVTIRNSNQNFQVPYAHRMTLISDELFEWLTTSCKGEYVNIDPNNVECLKHYDTYEKCVSKLEKGCILLPKCPFESPKQKDDHDRRSLYNTPKVFLDPKPPLPSLGCASYKYLLSYDWANDDQVQRALHIREGSIGEWIRCKKKDYQYEIKSVFPYHVNLSSKGYRSLIYSGDHDMMVPSMDTQAWIKSLNYSIVDDWRPWFIEDQVAGYTRTYANKMTFATIKGGGHTAEYTRKECSIMFSRWIIGKSL 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2316488 2338014 - MC11g0296 Mch11g0375 679309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0375 429 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 128 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Mch11g0375 429 FunFam Carboxypeptidase 285 428 - -
Mch11g0375 429 Gene3D alpha/beta hydrolase 32 128 IPR029058 -
Mch11g0375 429 SUPERFAMILY alpha/beta-Hydrolases 37 426 IPR029058 -
Mch11g0375 429 Pfam Serine carboxypeptidase 128 424 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Mch11g0375 429 Gene3D alpha/beta hydrolase 129 429 IPR029058 -
Mch11g0375 429 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 154 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Mch11g0375 429 PRINTS Carboxypeptidase C serine protease (S10) family signature 397 410 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0375 Mch-Chr11:2316488 Mch6g1400 Mch-Chr6:12275901 1.03E-65 dispersed
Mch11g0374 Mch-Chr11:2311564 Mch11g0375 Mch-Chr11:2316488 4.87E-41 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0375 K16296 - csv:101207623 528.094