Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0387 ATGGCCCCCTCGTTTGATTGGTGGGGGAAAGACACTCACAGAGGAACCCCTGTTGTTGTCAAGATGGAGAATCCGAACTGGTCCATGGTTGAGCTCGAGGGTCCGTCGGAGGATGACTTCCTCATCGCCGCCGAGTCGCCGCAGGGCCGGACCCGAGAGAAAGGCCGAGGCAAAAACGCGAAGCAACTCACGTGGGTCCTCCTCCTCAAGGCCCACAAGGCCGCCGGTTGTCTCACCTCCATTGGCTCCGCAATGGTGGACCTCGCCGCCGCCGTCAGACGCCGCGTCGCTTCCGGCGAGACCGACGCCGATGATGCCGCCGACAATGACGTCACTGTGGGAGGCAGAGAGAAAGAGAACCCCACTGTGAAAACGAGGTTTTATTCTTGTATTAAGGTGTTTCTATGGCTGTCGGTGCTTCTCTTAGGCTTTGAGATTGCAGCCTTTTTCAAGGGCTGGCATTTTGGTACCCCAAACCTTCAATTGGACTATCTTTGGGCTACTCAATTGGGTTTCAAAGGATTTTTCGGTTGGATTTATTCTCAATGGGTACTAGTTCGAGTGGAATATTTAGCTCCTCCTCTCCAGTTCTTAGCCAATGCCTGTATCATTCTGTTCATCATTCAGAGCTTGGATCGTTTAGTCCTATGTTTTGGCTGTTTCTGGATCCGATTCAAGAAAATCAAACCAGTTCTTAAACCAGGAGATGAAGACCTTGAATCTGGCGAGAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAACGAAAAAGAGGTTTATCAGCAATCTATTGCTGCTATCTGCAATTTAGACTGGCCAAGGACTAGGCTGCTCATACAAGTTCTTGATGATTCTGATGATCCAACTACCCAGTTGCTGATTAAAGAGGAGGTTCATAAATGGCAGCAAGAGGGTGCCAACATTGTCTATCGTCATCGGGTCATTAGAGATGGTTATAAAGCTGGGAACCTCAAATCCGCCATGAATTGTAGCTATGTCAAAGATTACGAATTCGTGGCCATTTTCGATGCCGATTTTCAACCCACCCCTGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGGACAATGAAGAACTGGGACTGGTTCAAGCAAGATGGTCTTTTGTGAACAAGGATGAGAACTTGCTAACCAGGCTTCAGAACATCAATTTAGCTTTCCATTTTGAAGTGGAGCAGCAAGTGAACAGCGTCTTCCTCAATTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCTCTCGAGGATGCCGGTGGGTGGCTGGAGAGGACCACGGTCGAGGACATGGATATCGCAGTTCGAGCTCATCTTCATGGATGGAAGTTCATATTCCTGAACGATGTCGAGTGCCAGTGTGAACTACCAGAATCTTATGAAGCTTATAGAAAACAGCAACATAGATGGCATTCTGGTCCAATGCAATTGTTTCGCCTTTGTCTGCCTGCTATTATTCGGTCCAAGATTAGTGTAGCAAAGAAGTTCAACTTGATCTTCCTCTTCTTTCTGCTCAGAAAACTGATACTGCCATTCTATTCTTTCACGCTTTTCTGCATAATTCTCCCAATGACAATGTTCGTTCCTGAGGCCGAGCTACCGGCTTGGGTTGTTTGCTACATCCCAGCCACCATGTCGTTTCTGAACATCCTGCCTGCCCCGAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTCGAGAACACCATGTCAGTCACCAAGTTCAATGCCTTGATCTCAGGCCTCTTCCAGCTTGGTAGTGCTTACGAATGGGTTGTTACAAAGAAATCTGGTCGTTCCTCCGAGGGCGATCTCGTTGCCTTGGTAGAGAGAGAGCAAAAGCATCAAAGAGTGGCATCTGCGCCTGAGCTAGAAGAGATGAAGGAGGAAATTCAGAAGCAAGAGCAGAAAGCTGCTCCCTCACGAAAGAAGAAGCACAACCGAATCTACACGAAAGAGCTCACATTGGCTTTCCTCCTCCTAACCGCATCGGCCCGGAGCCTTCTGTCTGCACAAGGGATCCATTTCTACTTCTTGTTGTTCCAAGGGATCTCGTTCCTGCTGGTCGGTTTGGACTTGATCGGCGAACAGATAGGTTGA 2130 48.22 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAAESPQGRTREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLAAAVRRRVASGETDADDAADNDVTVGGREKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFGTPNLQLDYLWATQLGFKGFFGWIYSQWVLVRVEYLAPPLQFLANACIILFIIQSLDRLVLCFGCFWIRFKKIKPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTRLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVAKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNALISGLFQLGSAYEWVVTKKSGRSSEGDLVALVEREQKHQRVASAPELEEMKEEIQKQEQKAAPSRKKKHNRIYTKELTLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2422199 2426069 - MC11g0308 Mch11g0387 679321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0387 709 Pfam Glycosyl transferase family group 2 342 549 IPR001173 -
Mch11g0387 709 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 465 IPR029044 -
Mch11g0387 709 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 177 707 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Mch11g0387 709 Coils Coil 634 654 - -
Mch11g0387 709 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 529 IPR029044 -
Mch11g0387 709 FunFam probable xyloglucan glycosyltransferase 5 241 466 - -
Mch11g0387 709 MobiDBLite consensus disorder prediction 629 654 - -
Mch11g0387 709 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0387 Mch-Chr11:2422199 Mch9g1064 Mch-Chr9:9871576 9.42E-302 dispersed
Mch11g0635 Mch-Chr11:4093054 Mch11g0387 Mch-Chr11:2422199 0 transposed
Mch4g2242 Mch-Chr4:23956344 Mch11g0387 Mch-Chr11:2422199 4.95E-303 transposed
Mch11g0387 Mch-Chr11:2422199 Mch8g0605 Mch-Chr8:4329710 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0387 - - - 0.0