Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0402 ATGGGAATCTGCATATCCACTGCATCTTCTCAGATTCGCCATGAAACCGAAGGCAGCGTTATTTGCAGAAACGAGCTCATCTACGAACAAAACGGCTCCATCTGTGGGATTCAGAAGCTCGATTACATCTGTTCCAAGCAAGGAGCCAAAGGAATCAACCAAGACGCAGCCTTTTTCTACCAGAACTACGGAGCAGAGAACACGGCCCTGCTCGGAGTTTTTGATGGGCACGGGAAAAACGGCCACGTCGTCAGCAACATGGTAAAAAATCGCCTCCCTTTGCTGTTGATTGGGCAGATAAATGAAAGAAATCGCGAAGAGCAGTTTGTTACTGCGTTTAAGGTGATGGACAAGGAGATTAAGCTTCATGAGAATCTGGATTGCTGGTGCAGTGGATCCACGGCTGTAATTGCAGTAAAAGAGGGAGAAGATTTGGTAATTGGTAATTTGGGGGATTCGAGGGCGGTGTTGGGGAGAATGGGCGAGGGCGGAATCGAAGCCGTTCAGTTAACGACTGATCTGAAGCCTGGTTTACCCGATGAAGGGGAGAGAATAAGGAGGAATAATGGACGGGTGTTGGCGCTGAAAGAAGAGCCGCATATACAGAGGGTGTGGCTGCCGAATGAAGACGCGCCGGGGCTGGCCATGTCCAGAGCTTTTGGAGACTTTGCTCTTAAAAACCATGGCATTATTGCTCTCCCCGACGTCTCCCACCGCCGTCTGACTTCCGACGACCGTTTCATCGTACTCGCCACTGATGGGATTTGGGACGTGCTAAGCAACGACCAAGTGGTGTCCATCGTGTGGGAGGCGGAGAACGAAGAAGCGGCGGCGAAAGCGGCGGTGGAGGCGGCGGCGGAGGCTTGGAAACGCTACCCTTCTTCAAAACTAGACGACTGCACCGTCGTTTGGCTGTTTTTACAGAACCAAGCCGAGAGGGAAAACTGA 948 51.69 MGICISTASSQIRHETEGSVICRNELIYEQNGSICGIQKLDYICSKQGAKGINQDAAFFYQNYGAENTALLGVFDGHGKNGHVVSNMVKNRLPLLLIGQINERNREEQFVTAFKVMDKEIKLHENLDCWCSGSTAVIAVKEGEDLVIGNLGDSRAVLGRMGEGGIEAVQLTTDLKPGLPDEGERIRRNNGRVLALKEEPHIQRVWLPNEDAPGLAMSRAFGDFALKNHGIIALPDVSHRRLTSDDRFIVLATDGIWDVLSNDQVVSIVWEAENEEAAAKAAVEAAAEAWKRYPSSKLDDCTVVWLFLQNQAEREN 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2536674 2538794 - MC11g0322 Mch11g0402 679336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0402 315 ProSiteProfiles PPM-type phosphatase domain profile. 40 307 IPR001932 -
Mch11g0402 315 Gene3D - 40 310 IPR036457 -
Mch11g0402 315 SUPERFAMILY PP2C-like 41 309 IPR036457 -
Mch11g0402 315 PANTHER PROTEIN PHOSPHATASE 43 305 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch11g0402 315 ProSitePatterns PPM-type phosphatase domain signature. 70 78 IPR000222 GO:0043169(InterPro)
Mch11g0402 315 CDD PP2Cc 42 269 IPR001932 -
Mch11g0402 315 Pfam Protein phosphatase 2C 45 288 IPR001932 -
Mch11g0402 315 SMART PP2C_4 24 305 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0402 Mch-Chr11:2536674 Mch2g0574 Mch-Chr2:4009574 1.99E-88 dispersed
Mch11g0402 Mch-Chr11:2536674 Mch4g0169 Mch-Chr4:1134981 9.93E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0402 - - - 0.0