Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0410 | ATGTCGAAAATGAAACATCTTCTCCGAAAGCTTCACATCGGTGGGGGGCTTAATGAGCACCAGCGATTGAGCGATGCCCGACCTGTGGCGCGACCCAGTTCGAGCCCCAGTCCCGGCCCCAGCCCCAATAGTAATCCATCGGCTTCTTCTTCTTCTGGCTCTTCATCGTCTCTGTCCATGGCGTCTTCTACGACAATTGGGAGATTGGAGGCTGTTGAATCGGTCGTTGATCGGACGGCTGCGGGGGATGTGGGCGGTGGGTGCGTCGATTTCAATGCCTTGGAGGAGGAGTTTCAGGTGCAATTGGCCATGGCGATTAGCGCCTCGGATCCCGATTCCAGACAAGATACTGAGTCGGCTCAGATCGATGCCGCCAAGCGGATGAGCCTTGGATGTTCGCCATCGGTGTTCGGCAGTCAAGCCCTCGCGGAGTTTCTATCGCTTCAGTATTGGAGCTATAATGTTGTAAATTATGATGAAAAAGTGATGGATGGATTTTATGACCTATATGGAATTACTGCAAGCTCTAGCACCCGAGGGAAGATGCCACTATTAGTTGATCTTAAGGAAATATCTGTCACGAGTGATATAGATTATGAAGTGATCTTGGTAAACCGCTTGCGTGATCCTGAACTTCAACAGTTGGAGAGACAAGCATATAACATATTCATGGAATGCATGGTTTCTGAATATGGTTTCATTTTAAGTGGCCTGGTACAAAAAATTGCTGATATAGTTGTTGCCAGAATGGGTGGTCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACTCGTAGGAGTTATGAGTTGCGTAGTTCTCTAAAGACCATTATTCTACCGCTTGGATGCCTTGATATTGGACTTGCTCGACATAGAGCTTTGCTTTTTAAGGTACTAGCTGATAGGATTAATCTTCCATGTATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGATGGAGCTGTGAATATGATCAAAATCGATAACGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACGCTAATTCCCTCAGAGGCACCCAGCGGTCAATTTTCAAATTATGGCTTTGATAGGAGACCTGCAGATGTTATTGCAGTTCCTGAAGAGACGCCAGTATCACAAAATGAAGGAAGCGAATTGGTATTGATTTCATCTGCTCAAGATGGAGTAGTAAATGGTTGCGATTCAATGTTCAAAGAAGCTTCAGATATAGGTGTTCAACCAAGAGAGAACGTTAGGAACTTTATTGAAGAAATTCAAACTGGGAGTTCTGATTATGATTTTGGGAAGCTCCTAGAATCAGGCAGCAATGCATGTGAAAGTTTGGAAGGTGTAGGTGGACAGCCATCGTCTGCACAAAAGAAGAAAGTTAAAAAAGTTTCGAAGTATGTCATTAGCGCTGCAAAGAACCCAGAGTTTGCTCAGAAATTACATGCTGTCTTGCTAGAGAGTGGTGCATCACCTCCTGCTGATTTGTTTTCAGACATAGATTCACAGGATAATGGTGAAAGAAAAGCGATTCACCAAATGTATTCAATCAATGGGAAAGGCATGGATGTTGGGCTTCAATGCCACCTAGAGTTAGCAAGACATGGACAGTCTTCTGCTACTTCTACTGCAGTGGAGTATTTGAATAATGCTGTCCATGAAAATAAGCAGAAAGTGTTTACTGAGGGATTATCCGAAGAACAAACACTTGGGACAAATGTGAACAAGCACGGTATTTTTTGGCCTCACGGTGTGACAAACGAGGGATTTGTGTTTGTTGATGGTGAAGCTGGAAAATTGGTTGATGTTAACGGAACTTTTAATCGTGAACAAATGGATGGTGTTTCATTAACCTCTGATGCTGACTCTCATAAAAAACAACAAGGAACTGCCTTAGTGAGCGAAGAGAGAAAATGGTTGCAAGATAAGAGTGGTGGAATTCTTCAATGCTTTGATTTTCGTGAAAATCCGTCGGAAAATTTAATAGAAACTGCTGATAGTAACCTGCATACTGCTGATAGCCCCAGTGAGACGATTAACCCAATGTTGGGTGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGTATTGGTATTGGTTCATATGGCGAGGTTTATCGTGCAGATTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGACCAAGATTTTTCCGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTCGAAATCATGTTAAGACTGAGGCATCCAAATGTTGTCCTTTTCATGGGAGCAGTCACTCGCCCTCCTCATTTCTCTATCCTTACTGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTATTGCATCGTCCCAATTCTCAACTTGACGAAAGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACCTGCACACAAGCCATCCTACCATTGTTCATAGAGATCTGAAGTCTCCCAATCTACTTGTTGATAAAAACTGGGTTGTCAAGGTTTGCGATTTTGGCTTGTCACGTGTCAAGCAGAATACATTTCTGTCTTCAAAGTCAACTGCTGGAACGCCTGAATGGATGGCACCAGAGGTTCTAAGGAACGAACCAGCCAACGAGAAGTGTGATGTGTATAGTTTTGGTGTGATATTGTGGGAGTTGACGACGTCCCGCATCCCGTGGAAAGGTTTGAACCCAATGCAGGTTGTGGGGGCTGTTGGATTCCAGGATAGGCGCTTGGAGATCCCAGAAGATGTCGATCCAGCAGTTGCACAGATCATTTGTGAATGTTGGCAAACGGACACGCAATCGAGGCCATCTTTCTCTCAGCTTATTACTCGATTGCGGCGCCTTCAACGGCTCGTTCAGAGAACGAACTCCGGGAATCAAATACCGGAGTGA | 2904 | 44.35 | MSKMKHLLRKLHIGGGLNEHQRLSDARPVARPSSSPSPGPSPNSNPSASSSSGSSSSLSMASSTTIGRLEAVESVVDRTAAGDVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSVFGSQALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITASSSTRGKMPLLVDLKEISVTSDIDYEVILVNRLRDPELQQLERQAYNIFMECMVSEYGFILSGLVQKIADIVVARMGGPVGDAEEMLRRWTRRSYELRSSLKTIILPLGCLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSGQFSNYGFDRRPADVIAVPEETPVSQNEGSELVLISSAQDGVVNGCDSMFKEASDIGVQPRENVRNFIEEIQTGSSDYDFGKLLESGSNACESLEGVGGQPSSAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIDSQDNGERKAIHQMYSINGKGMDVGLQCHLELARHGQSSATSTAVEYLNNAVHENKQKVFTEGLSEEQTLGTNVNKHGIFWPHGVTNEGFVFVDGEAGKLVDVNGTFNREQMDGVSLTSDADSHKKQQGTALVSEERKWLQDKSGGILQCFDFRENPSENLIETADSNLHTADSPSETINPMLGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTSRIPWKGLNPMQVVGAVGFQDRRLEIPEDVDPAVAQIICECWQTDTQSRPSFSQLITRLRRLQRLVQRTNSGNQIPE | 967 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2575785 | 2585254 | - | MC11g0330 | Mch11g0410 | 679344 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0410 | 967 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 816 | 828 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 143 | 347 | - | - | |
Mch11g0410 | 967 | ProSitePatterns | Protein kinases ATP-binding region signature. | 703 | 725 | IPR017441 | GO:0005524(InterPro) | |
Mch11g0410 | 967 | Gene3D | Phosphorylase Kinase; domain 1 | 690 | 774 | - | - | |
Mch11g0410 | 967 | PRINTS | Tyrosine kinase catalytic domain signature | 920 | 942 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | PRINTS | Tyrosine kinase catalytic domain signature | 810 | 828 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | PRINTS | Tyrosine kinase catalytic domain signature | 771 | 784 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | PRINTS | Tyrosine kinase catalytic domain signature | 857 | 867 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | PRINTS | Tyrosine kinase catalytic domain signature | 876 | 898 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | FunFam | Serine/threonine-protein kinase CTR1 | 776 | 959 | - | - | |
Mch11g0410 | 967 | Gene3D | Transferase(Phosphotransferase) domain 1 | 776 | 962 | - | - | |
Mch11g0410 | 967 | ProSiteProfiles | Protein kinase domain profile. | 697 | 956 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | MobiDBLite | consensus disorder prediction | 44 | 60 | - | - | |
Mch11g0410 | 967 | FunFam | Serine/threonine-protein kinase isoform 1 | 688 | 775 | - | - | |
Mch11g0410 | 967 | MobiDBLite | consensus disorder prediction | 11 | 60 | - | - | |
Mch11g0410 | 967 | Pfam | Protein tyrosine and serine/threonine kinase | 697 | 949 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | SMART | serkin_6 | 697 | 956 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0410 | 967 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 40 | 952 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Mch11g0410 | 967 | SUPERFAMILY | Protein kinase-like (PK-like) | 673 | 947 | IPR011009 | - | |
Mch11g0410 | 967 | CDD | STKc_MAP3K-like | 703 | 949 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0410 | Mch-Chr11:2575785 | Mch3g1592 | Mch-Chr3:17863029 | 5.23E-227 | dispersed | |
Mch8g2922 | Mch-Chr8:31967533 | Mch11g0410 | Mch-Chr11:2575785 | 2.67E-21 | dispersed | |
Mch11g0410 | Mch-Chr11:2575785 | Mch1g0900 | Mch-Chr1:12340518 | 4.71E-135 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77044 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-65 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0410 | K04424 | - | csv:101214554 | 1613.97 |