Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0422 ATGTCGGAAAAAATGGACGGTTTTCTTCAAACAGTGATGGCGAGCATACCTTTGGGAGTGGGTGGAATACTATTCACGGCGTTGTGCGTCGTGGCGGGGGGTTTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATTCCACTGGTCGGGCACCTCCCCTTGCTGGCTAAGTATGGCCCAGACGTTTTCTCAGTCCTCGCCTCTCAATATGGCCCTATCTTCAGGTTTCATATGGGTAGGCAGCCACTAATCATTATTGCAGACCCTGAGCTTTGTAAAGAAGTTGGGATTAAGAAATTCAAGGACATCCCAAATAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCTCTTCATCAGAAGGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACGATATTATCGGTCTATCAGCCCTCTCATCTAGCGAGCCTAATACCTAATATGCAATCAATCATTGAAACTGCAACTCAAAATCTCCATTCCTCTGAAGAGAAAGACATCCCTTTCTCCAATCTCTCCCTCAAATTGACCACTGATGTGATTGGAACAGCAGCCTTTGGAGTTAACTTTGGGCTCTCGAATCCACAAGCAACCAAAACTGCTACCAGTGGTCAAGACAACAAAAGTGATGAGGTTTCAGACTTCATCAACCAACATATTTACTCCACAACGCAGCTGAAGATGGATTTATCAGGTTCCTTCTCAATCATACTGGGACTACTTGTCCCTATACTCCAAGAACCATTTAGACAAGTCCTAAAGAGAATACCATTCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTCGGCTTAATGAGATTGTGGACAAGAGAATGAAGTGTAACGATCGAGGTTCAAAAGACTTCTTATCACTCATTTTGAGAGCAAGAGAGTCAGAGACAGTGTCAAGGAATGTCTTCACTCCAGACTACATCAGTGCAGTCACGTACGAACACCTACTTGCTGGATCAGCTACCACGGCGTTCACGTTATCTTCAGTTGTATATTTAGTTGCTGGACATCTAGAAGTTGAGAAGAAGTTGCTTGAAGAGATTGACAACTTTGGTCCGTCAGATAAGATACCAACAGCTAATGATCTTCAGCAGAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTCTACACTGTTTCCCCTCTAGTAGCCAGAGAGACATCGAAAAACGTGGAGATCGGTGGATATCTCCTTCCAAAGGGGACGTGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAAAACTTTCCAGAACCAGATAAGTTCAAACCAGAGAGGTTTGATCCAAATGGGGAAGAAGAGAAACAAAGGCATCCATATGCTTTAATCCCATTTGGAATTGGTCCTCGAGCATGCATCGGTCAAAAATTTGCCCTCCAGGAGTTGAAGCTCTCGTTGATTCATTTATATAGGAAGTTCGTCTTTCGACATTCCCCCTCCATGGAACAACCTCTTGAACTCGAGTACGGTGTCATTCTCAACTTCAAGAACGGTGTCAATCTCAGAGTGTTAAACCGTATATAG 1605 44.49 MSEKMDGFLQTVMASIPLGVGGILFTALCVVAGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLASLIPNMQSIIETATQNLHSSEEKDIPFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTATSGQDNKSDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQVLKRIPFTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRGSKDFLSLILRARESETVSRNVFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHLEVEKKLLEEIDNFGPSDKIPTANDLQQKFPYLDQVIKEAMRFYTVSPLVARETSKNVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNGEEEKQRHPYALIPFGIGPRACIGQKFALQELKLSLIHLYRKFVFRHSPSMEQPLELEYGVILNFKNGVNLRVLNRI 534
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 2644393 2648337 + MC11g0340 Mch11g0422 679356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0422 534 Gene3D Cytochrome P450 39 534 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PANTHER THROMBOXANE-A SYNTHASE 26 533 - -
Mch11g0422 534 FunFam Cytochrome P450 3A4 36 534 - -
Mch11g0422 534 SUPERFAMILY Cytochrome P450 41 533 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g0422 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g0422 534 Pfam Cytochrome P450 49 516 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0422 Mch-Chr11:2644393 Mch6g2308 Mch-Chr6:25044407 7.84E-27 dispersed
Mch11g0422 Mch-Chr11:2644393 Mch8g0955 Mch-Chr8:6779027 1.97E-27 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0422 K20771 - csv:101209772 989.949