Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0422 | ATGTCGGAAAAAATGGACGGTTTTCTTCAAACAGTGATGGCGAGCATACCTTTGGGAGTGGGTGGAATACTATTCACGGCGTTGTGCGTCGTGGCGGGGGGTTTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATTCCACTGGTCGGGCACCTCCCCTTGCTGGCTAAGTATGGCCCAGACGTTTTCTCAGTCCTCGCCTCTCAATATGGCCCTATCTTCAGGTTTCATATGGGTAGGCAGCCACTAATCATTATTGCAGACCCTGAGCTTTGTAAAGAAGTTGGGATTAAGAAATTCAAGGACATCCCAAATAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCTCTTCATCAGAAGGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACGATATTATCGGTCTATCAGCCCTCTCATCTAGCGAGCCTAATACCTAATATGCAATCAATCATTGAAACTGCAACTCAAAATCTCCATTCCTCTGAAGAGAAAGACATCCCTTTCTCCAATCTCTCCCTCAAATTGACCACTGATGTGATTGGAACAGCAGCCTTTGGAGTTAACTTTGGGCTCTCGAATCCACAAGCAACCAAAACTGCTACCAGTGGTCAAGACAACAAAAGTGATGAGGTTTCAGACTTCATCAACCAACATATTTACTCCACAACGCAGCTGAAGATGGATTTATCAGGTTCCTTCTCAATCATACTGGGACTACTTGTCCCTATACTCCAAGAACCATTTAGACAAGTCCTAAAGAGAATACCATTCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTCGGCTTAATGAGATTGTGGACAAGAGAATGAAGTGTAACGATCGAGGTTCAAAAGACTTCTTATCACTCATTTTGAGAGCAAGAGAGTCAGAGACAGTGTCAAGGAATGTCTTCACTCCAGACTACATCAGTGCAGTCACGTACGAACACCTACTTGCTGGATCAGCTACCACGGCGTTCACGTTATCTTCAGTTGTATATTTAGTTGCTGGACATCTAGAAGTTGAGAAGAAGTTGCTTGAAGAGATTGACAACTTTGGTCCGTCAGATAAGATACCAACAGCTAATGATCTTCAGCAGAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTCTACACTGTTTCCCCTCTAGTAGCCAGAGAGACATCGAAAAACGTGGAGATCGGTGGATATCTCCTTCCAAAGGGGACGTGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAAAACTTTCCAGAACCAGATAAGTTCAAACCAGAGAGGTTTGATCCAAATGGGGAAGAAGAGAAACAAAGGCATCCATATGCTTTAATCCCATTTGGAATTGGTCCTCGAGCATGCATCGGTCAAAAATTTGCCCTCCAGGAGTTGAAGCTCTCGTTGATTCATTTATATAGGAAGTTCGTCTTTCGACATTCCCCCTCCATGGAACAACCTCTTGAACTCGAGTACGGTGTCATTCTCAACTTCAAGAACGGTGTCAATCTCAGAGTGTTAAACCGTATATAG | 1605 | 44.49 | MSEKMDGFLQTVMASIPLGVGGILFTALCVVAGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLASLIPNMQSIIETATQNLHSSEEKDIPFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTATSGQDNKSDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQVLKRIPFTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRGSKDFLSLILRARESETVSRNVFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHLEVEKKLLEEIDNFGPSDKIPTANDLQQKFPYLDQVIKEAMRFYTVSPLVARETSKNVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNGEEEKQRHPYALIPFGIGPRACIGQKFALQELKLSLIHLYRKFVFRHSPSMEQPLELEYGVILNFKNGVNLRVLNRI | 534 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2644393 | 2648337 | + | MC11g0340 | Mch11g0422 | 679356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0422 | 534 | Gene3D | Cytochrome P450 | 39 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PANTHER | THROMBOXANE-A SYNTHASE | 26 | 533 | - | - | |
| Mch11g0422 | 534 | FunFam | Cytochrome P450 3A4 | 36 | 534 | - | - | |
| Mch11g0422 | 534 | SUPERFAMILY | Cytochrome P450 | 41 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 328 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 469 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 75 | 94 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 479 | 502 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | P450 superfamily signature | 479 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | P450 superfamily signature | 339 | 356 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | P450 superfamily signature | 393 | 404 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | PRINTS | P450 superfamily signature | 470 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0422 | 534 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 472 | 481 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0422 | 534 | Pfam | Cytochrome P450 | 49 | 516 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0422 | Mch-Chr11:2644393 | Mch6g2308 | Mch-Chr6:25044407 | 7.84E-27 | dispersed | |
| Mch11g0422 | Mch-Chr11:2644393 | Mch8g0955 | Mch-Chr8:6779027 | 1.97E-27 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0422 | K20771 | - | csv:101209772 | 989.949 |