Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0433 ATGGAGGATCGGGAGGAGGAGGAGAAGGCAGAAGAAGAGGTGCAAGGTTCCAGCCTGACGATGGAGAAAGTGGCGGCGGCTAAGAAGTTTATAGAGAACCATTACAGAGCTCAGATGAAGAACATTCAAGAGCGGAAGGAGAGACGATGGATGTTGGAACGTAAGTTAGCCTCCTCAGATGTTCCTAAGGATGAACAAATCAATCTTATCAAAGATTTAGAGCGGAAAGAAACCGAGTTTATGCGACTCAAAAGGCACAAGATTTGCGTGGATGATTTTGAGCTTTTAACCATCATTGGCAGGGGGGCTTTTGGTGAGGTTCGATTATGTCGTGAGAAGAAATCCGGTGATATATACGCGATGAAAAAGTTGAAAAAATCTGAAATGCTGATGAGAGGACAGGTGGAACATGTTAGAGCAGAAAGGAACTTATTAGCAGAAGTTGCCAGCCATTGCATCGTGAAGCTTTATTACTCATTCCAGGATGCTGAGTATTTGTACTTGATCATGGAATATCTGCCAGGTGGAGATATGATGACTCTACTTATGAGGGAAGACACATTGACTGAAAACGTGGCAAAATTTTACATTGCACAAAGTGTTCTTGCAATTGAATCTATCCACAGGCACAACTATATTCACAGGGATATTAAACCTGACAATCTTCTTCTGGACAAAAATGGTCACATGAAGCTTTCTGATTTTGGTCTCTGTAAGCCACTGGATTCTTTAACCCTATCCGCACTACATGAAAATAAAACCATGGATGATGAAAATTTGGCAGAACCAATGGATATTGACGATAATAGGAGTAGTTGGAAGAGTCCCAGTGAACAGCTACACCATTGGCAAATGAACCGGAGGAAGTTGGCATTTTCAACAGTTGGAACACCGGATTATATAGCTCCAGAAGTATTACTTAAAAAAGGATATGGGATGGAGTGCGACTGGTGGTCCCTCGGTGCTATTATGTATGAGATGCTCGTAGGTTACCCTCCATTTTACTCTGATGATCCAATCACCACATGCAGAAAGATTGTTCATTGGAAAAATCATTTGAAGTTTCCAGAAGATGCAAAGTTGACAAATGAAGCAAAGGACCTCATTTGTAGGTTGCTTTGTGATGTTGAGCATAGACTTGGTACTGGAGGAGCATACCAAATTAGAGCTCATCCCTGGTTCAAAGATGTCGTCTGGGATAGACTTTATGAAGTGGATGCAGCTTTTAAGCCTGAAGTCAATGGAGAGCTTGATACCCAGAACTTTATGAAGTTTGACGAACTGGATCCACCGATACCAGGAAAACGTGGCTCAGGACCATCACGGAAGATGCTATTGACTCCCAAAGATCTCAGCTTTGTCGGGTATACATACAAGAACTTCGATGCTGTCAAAGGACTTCATGGATTACATGATTCTCAAAAATTGTCAATGAAACAGCCTTCAATTGACGTATTAAATGGCACTGCGGGAGACTACACAGCCGAACTAATAGCGAACGAGGAAGTGCAGATGGTAGCAGTATCAGGAGATCCCATGCTGCCATAA 1548 42.38 MEDREEEEKAEEEVQGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWMLERKLASSDVPKDEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGDIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLTENVAKFYIAQSVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDSLTLSALHENKTMDDENLAEPMDIDDNRSSWKSPSEQLHHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPEDAKLTNEAKDLICRLLCDVEHRLGTGGAYQIRAHPWFKDVVWDRLYEVDAAFKPEVNGELDTQNFMKFDELDPPIPGKRGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGLHGLHDSQKLSMKQPSIDVLNGTAGDYTAELIANEEVQMVAVSGDPMLP 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2716606 2724678 + MC11g0349 Mch11g0433 679367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0433 515 SMART pkinase_C_6 395 460 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 SUPERFAMILY Protein kinase-like (PK-like) 77 432 IPR011009 -
Mch11g0433 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 CDD MobB_NDR_LATS-like 27 88 - -
Mch11g0433 515 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Mch11g0433 515 SMART serkin_6 93 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 Gene3D Phosphorylase Kinase; domain 1 58 176 - -
Mch11g0433 515 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524(InterPro)
Mch11g0433 515 Pfam Protein kinase C terminal domain 413 458 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 462 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch11g0433 515 ProSiteProfiles Protein kinase domain profile. 93 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 FunFam Non-specific serine/threonine protein kinase 413 423 - -
Mch11g0433 515 MobiDBLite consensus disorder prediction 1 20 - -
Mch11g0433 515 ProSiteProfiles AGC-kinase C-terminal domain profile. 395 468 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 FunFam Non-specific serine/threonine protein kinase 293 412 - -
Mch11g0433 515 CDD STKc_NDR_like 91 459 - -
Mch11g0433 515 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Mch11g0433 515 Gene3D Transferase(Phosphotransferase) domain 1 293 414 - -
Mch11g0433 515 Gene3D Transferase(Phosphotransferase) domain 1 177 243 - -
Mch11g0433 515 Pfam Protein kinase domain 94 243 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0433 515 Pfam Protein kinase domain 285 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0433 Mch-Chr11:2716606 Mch7g0952 Mch-Chr7:13933984 6.16E-229 dispersed
Mch1g2120 Mch-Chr1:20448907 Mch11g0433 Mch-Chr11:2716606 6.81E-226 transposed
Mch3g1802 Mch-Chr3:19220445 Mch11g0433 Mch-Chr11:2716606 7.92E-76 transposed
Mch6g2545 Mch-Chr6:27350844 Mch11g0433 Mch-Chr11:2716606 1.35E-66 transposed
Mch8g0686 Mch-Chr8:4915948 Mch11g0433 Mch-Chr11:2716606 3.58E-204 transposed
Mch11g0433 Mch-Chr11:2716606 Mch6g0941 Mch-Chr6:6647365 2.67E-283 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77045 PF00069 Pkinase 4.30E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0433 K08790 - csv:101212228 1004.59