Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0440 ATGAGCCTGGATGCAGCGGAGGATGAATCAACTTCAGAGATTCATATTCCAGCAGAGATTGATTGGGATATGCTGGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACCGCCCTTTATCCAATTGTTGTTCTGAAAACTCGTCTACAGGTTTCAGCAACCAAGCTATCAAGCTTTAAAATGTCATATTCCATCATGCGCCATGAAGGTTTAAGAGGGTTTTACAGGGGGTTTGGAACCTCTTTAATGGGAACCATCCCAGCTAGAGCCTTCTACATGGCAGCCCTTGAGGTTACCAAGAGTGGTGTTGGAAGCGCCACGGTTAGATTAGGTTTTTCAGACACCACAGCCATGGCTATAGCTAATGGAGCTGCAGGGTTGAGCTCAGCCATGGCTGCCCAATTGGTGTGGACTCCAATAGATGTGGTGAGCCAAAGACTAATGGTTCAGGGCTGCAATATTGGTGCCAAGAACAGTATCTCTAATCTTAATTCTTGTGTCTATAAAAATGGTATTGATGCTTTCAGAAAGATTGTTTATGCTGATGGATTGAGAGGACTATACAGGGGATTTGGTATTTCAATATTGACATATGCTCCATCAAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCTCATAGGCTCATTTGGAGTGGCCTTGGCTACTACAAAAGTAAGAAGGATGAGAGTTGTTCTAATGGTGGCTATGGCTTTAAAGCACACTCTAAGGCAACAGTGGTAGTGCAGGGGTTGAGCGCAGCCATGGCCAGTGGGGTTTCTGCTATCATAACTATGCCACTGGATACCATCAAGACTAGACTGCAAGTTTTGGATGGAGAAGAAAACGGGCAAAGACGTCCTCTAACGACGTTGCAGACCATAAGAAACTTGATGAAGGAAGGCGGGCTGAATGCTTGTTACCGGGGGCTTGGGCCGAGGTGGGCTTCGATGGCCATGTCGGCCACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATTGTTTGAGCTGA 1050 45.52 MSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSATKLSSFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNIGAKNSISNLNSCVYKNGIDAFRKIVYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRLIWSGLGYYKSKKDESCSNGGYGFKAHSKATVVVQGLSAAMASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTTLQTIRNLMKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDCLS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2762416 2767791 + MC11g0354 Mch11g0440 679374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0440 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Mch11g0440 349 SUPERFAMILY Mitochondrial carrier 23 337 IPR023395 -
Mch11g0440 349 Gene3D Mitochondrial carrier domain 29 347 IPR023395 -
Mch11g0440 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Mch11g0440 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 340 IPR018108 -
Mch11g0440 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 346 - -
Mch11g0440 349 Pfam Mitochondrial carrier protein 250 343 IPR018108 -
Mch11g0440 349 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Mch11g0440 349 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Mch11g0440 349 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085(InterPro)
Mch11g0440 349 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Mch11g0440 349 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0440 Mch-Chr11:2762416 Mch4g2377 Mch-Chr4:24922215 3.73E-78 dispersed
Mch11g0440 Mch-Chr11:2762416 Mch9g0233 Mch-Chr9:1742166 6.83E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0440 K15121 - csv:101213436 640.958