Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0440 | ATGAGCCTGGATGCAGCGGAGGATGAATCAACTTCAGAGATTCATATTCCAGCAGAGATTGATTGGGATATGCTGGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACCGCCCTTTATCCAATTGTTGTTCTGAAAACTCGTCTACAGGTTTCAGCAACCAAGCTATCAAGCTTTAAAATGTCATATTCCATCATGCGCCATGAAGGTTTAAGAGGGTTTTACAGGGGGTTTGGAACCTCTTTAATGGGAACCATCCCAGCTAGAGCCTTCTACATGGCAGCCCTTGAGGTTACCAAGAGTGGTGTTGGAAGCGCCACGGTTAGATTAGGTTTTTCAGACACCACAGCCATGGCTATAGCTAATGGAGCTGCAGGGTTGAGCTCAGCCATGGCTGCCCAATTGGTGTGGACTCCAATAGATGTGGTGAGCCAAAGACTAATGGTTCAGGGCTGCAATATTGGTGCCAAGAACAGTATCTCTAATCTTAATTCTTGTGTCTATAAAAATGGTATTGATGCTTTCAGAAAGATTGTTTATGCTGATGGATTGAGAGGACTATACAGGGGATTTGGTATTTCAATATTGACATATGCTCCATCAAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCTCATAGGCTCATTTGGAGTGGCCTTGGCTACTACAAAAGTAAGAAGGATGAGAGTTGTTCTAATGGTGGCTATGGCTTTAAAGCACACTCTAAGGCAACAGTGGTAGTGCAGGGGTTGAGCGCAGCCATGGCCAGTGGGGTTTCTGCTATCATAACTATGCCACTGGATACCATCAAGACTAGACTGCAAGTTTTGGATGGAGAAGAAAACGGGCAAAGACGTCCTCTAACGACGTTGCAGACCATAAGAAACTTGATGAAGGAAGGCGGGCTGAATGCTTGTTACCGGGGGCTTGGGCCGAGGTGGGCTTCGATGGCCATGTCGGCCACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATTGTTTGAGCTGA | 1050 | 45.52 | MSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSATKLSSFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNIGAKNSISNLNSCVYKNGIDAFRKIVYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRLIWSGLGYYKSKKDESCSNGGYGFKAHSKATVVVQGLSAAMASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTTLQTIRNLMKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDCLS | 349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2762416 | 2767791 | + | MC11g0354 | Mch11g0440 | 679374 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0440 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 221 | IPR018108 | - | |
Mch11g0440 | 349 | SUPERFAMILY | Mitochondrial carrier | 23 | 337 | IPR023395 | - | |
Mch11g0440 | 349 | Gene3D | Mitochondrial carrier domain | 29 | 347 | IPR023395 | - | |
Mch11g0440 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Mch11g0440 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 250 | 340 | IPR018108 | - | |
Mch11g0440 | 349 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 6 | 346 | - | - | |
Mch11g0440 | 349 | Pfam | Mitochondrial carrier protein | 250 | 343 | IPR018108 | - | |
Mch11g0440 | 349 | Pfam | Mitochondrial carrier protein | 39 | 108 | IPR018108 | - | |
Mch11g0440 | 349 | Pfam | Mitochondrial carrier protein | 126 | 222 | IPR018108 | - | |
Mch11g0440 | 349 | PRINTS | Mitochondrial carrier protein signature | 40 | 58 | IPR002067 | GO:0055085(InterPro) | |
Mch11g0440 | 349 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085(InterPro) | |
Mch11g0440 | 349 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0440 | Mch-Chr11:2762416 | Mch4g2377 | Mch-Chr4:24922215 | 3.73E-78 | dispersed | |
Mch11g0440 | Mch-Chr11:2762416 | Mch9g0233 | Mch-Chr9:1742166 | 6.83E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0440 | K15121 | - | csv:101213436 | 640.958 |