Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0457 ATGAGGTCTGTGAAGATGGCAGCCATGGCATTTCCTGTTGAGCTGGTTGTTCTGGTATTTCTCTTCTATCCAACCGTTGGTTTGGTGGACTCGGATGATGGAGCAACATTGTTGGAGATAAAGAAATCATTCAGGGATGTGGATAATGTTCTATATGATTGGACAAGCTCACCCTCTTCAGACTACTGTATATGGAGAGGTGTCACTTGTGACAATGCCACTCTAAATGTTATTTCTCTTAATCTTTCTGGTCTTAATCTGGACGGGGAAATTTCTCCTTCGGTTGGAAACCTCAAGGGCCTGCAAACTTTGGATTTGAGGGGAAATAGTCTTTCTGGGCAAATGCCAGACGAGATTGGTGACTGCTCTTCGTTAATAAATCTGGATTTATCGTTTAATGAGATCTATGGAGACATACCATTTTCCATTTCAAAGTTGAAGCAACTGGAAATGCTAGTTCTAAAAAATAATCAACTGATTGGACCGATCCCGTCAACTTTATCTCAGATTCCAAATTTGAAGGTCTTAGATCTGGCACAGAATAATCTTAATGGCGAAATACCAAGACTTATTTACTGGAATGAAGTGTTGCAATATCTCGGTTTGCGCGGTAACAATTTGATTGGTACACTCTCTCCAGATATGTGTCAACTCACTGGTTTATGGTATTTTGACGTGAGAAACAACAGTTTAACTGGAAGCATACCTCAAACCGTAGGCAACTGCACTGCCTTCCAGGTCTTGGACCTGTCGTACAACCATCTAACTGGAGAGATACCGTTCAATATCGGTTTCCTTCAAGTAGCCACACTGTCCTTGCAGGGGAATCAGCTATCAGGTCCCATCCCACCAGTAATAGGTCTGATGCAGGCGCTTGCTGTGCTAGATTTGAGCTGCAACATGTTGACTGGACCAATCCCCTCTATCTTAGGGAATTTGACTTATACTGAGAAACTGTACTTGCATGGTAACAAGCTCACTGGGTCCATTCCAGCTGAGCTCGGGAATATGACAAAGCTACATTATCTGGAACTGAATGATAATCATCTTACTGGGAATATTCCAGCTGAGCTCGGGAAACTCACTGATTTATTCGATCTAAATGTTGCTAATAACAATCTCGAAGGGCCTATTCCTGATAATCTCAGCTCATGCACAAATCTGAACAGCCTAAATGTCCATGGCAACAAGTTGAATGGAACTATTCCGCCGTCTTTCCAGAGGCTAGAGAGTATGACTTACTTAAATCTCTCCTCGAATGATCTACGCGGTCCTATCCCAGTTGAGCTGTCTCGGATTGGTAATTTGGACACGCTGGACATTTCAAACAACAAAGTTAGTGGCACAATTTCTTCATCCTTTGGTGACCTGGAGCATCTCCTAAAGCTAAATTTGAGCAGAAATCGTTTAACAGGATTCATTCCAGCAGAATTTGGAAATCTGAGGAGTGTAATGGAAATAGATATTTCACACAATCAGCTCTCTGGCTTCATTCCTCAAGAACTGAGTCAACTTCAAAATCTGCTCTCCTTGAGACTTCAAAACAACAATTTATCTGGAGACGTGACATCGCTGATTAACTGCCCAAGTCTCACCGAATTAAATGTATCTTACAACAATCTAGCTGGTGACATTCCCACAAGCAACAACTTCTCAAGGTTTTCATCTGACAGTTTCCTTGGAAATCTTGCCCTCTGTGGATACTGGAATAACAACAACTATCCCTGTCATGAAATTCGTACGACAGAGCGAGTGACAATATCTAAAGCTGCTATCCTGGGGATTGCTCTTGGTGCACTCGTGATTCTTCTAATGATCCTTCTAACAGTATGCCGTCCGAATAATACGATACCTTTTCCAGATGGATCACTTGATAAACCAGTTACTTACTCAACTCCCAAGCTAGTGATCCTTCACATGAACATGGCGCTTCATGTATATGAGGACATTATGAGGATGACTGAGAATTTGAGTGAAAAGTACATAATCGGATATGGAGCTTCAAGCACGGTCTACAAATGTGTACTGAAGAATTGCAAACCCGTGGCTATCAAGAAGCTCTATTCTCACCAGCCCCAAAGCATGAAGGAGTTCGAGACCGAACTCGAAACTGTGGGGAGCATCAAGCACAGGAATCTAGTCAGCCTCCAAGGATACTCCTTGTCCCCCACTGGGAATCTCCTCTTCTATGATTACATGGAAAATGGCAGCCTTTGGGATCATCTACATGGCTCTAGCTCTATCAAGAAGAAAAAGCTCGACTGGGACACTCGGCTTAATATCGCACTTGGAGCAGCACAAGGACTATCATATCTACACCATGATTGTAGCCCTCGCATTATCCACAGGGATGTCAAGTCATCAAACATTCTATTGGACAAGGATTTTGACGCCCATCTCACTGATTTTGGCATCGCCAAGAGTTTATGTACCTCAAAGACATATACATCAACTTATATCATGGGCACGATCGGATACATCGATCCAGAGTATGCTCGGACTTCTCGACTAACCGAGAAGTCTGATGTTTACAGCTTTGGCGTTGTGTTACTTGAGTTGCTTACAGGAAGGAAAGCTGTGGACAATGAATCAAATCTCCACCAATTGATCTTATCAAAGACAGCCAACAATGCTGTAATGGAGACAGTTGATCCAGAAATAACTGCAACTTGCAAGGACCTAGGAGCTGTAAAGAAGATATTTCAGCTTGCTCTCCTATGCACCAAGAGACAGCCATCGGACCGACCAACAATGCATGAAGTAACGCGCGTCCTCGGGAGTCTTCTTCCCTCCACCGAACCCCCAAAACCACCAACCATAACATCCATGGCCCCATCTGCAAAAGTCCCATGCTACAAGGATGAGTACGCAAATCTAGAAACACCGCACGTGCTGAACTGCCCATCCATGAGCACGTCTGACGCCCAGCTCTTCCTCAAGTTCGGAGAGGTTATATCACAGAACAGTGAGTAA 2973 43.49 MRSVKMAAMAFPVELVVLVFLFYPTVGLVDSDDGATLLEIKKSFRDVDNVLYDWTSSPSSDYCIWRGVTCDNATLNVISLNLSGLNLDGEISPSVGNLKGLQTLDLRGNSLSGQMPDEIGDCSSLINLDLSFNEIYGDIPFSISKLKQLEMLVLKNNQLIGPIPSTLSQIPNLKVLDLAQNNLNGEIPRLIYWNEVLQYLGLRGNNLIGTLSPDMCQLTGLWYFDVRNNSLTGSIPQTVGNCTAFQVLDLSYNHLTGEIPFNIGFLQVATLSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLTGPIPSILGNLTYTEKLYLHGNKLTGSIPAELGNMTKLHYLELNDNHLTGNIPAELGKLTDLFDLNVANNNLEGPIPDNLSSCTNLNSLNVHGNKLNGTIPPSFQRLESMTYLNLSSNDLRGPIPVELSRIGNLDTLDISNNKVSGTISSSFGDLEHLLKLNLSRNRLTGFIPAEFGNLRSVMEIDISHNQLSGFIPQELSQLQNLLSLRLQNNNLSGDVTSLINCPSLTELNVSYNNLAGDIPTSNNFSRFSSDSFLGNLALCGYWNNNNYPCHEIRTTERVTISKAAILGIALGALVILLMILLTVCRPNNTIPFPDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHQPQSMKEFETELETVGSIKHRNLVSLQGYSLSPTGNLLFYDYMENGSLWDHLHGSSSIKKKKLDWDTRLNIALGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFDAHLTDFGIAKSLCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGVVLLELLTGRKAVDNESNLHQLILSKTANNAVMETVDPEITATCKDLGAVKKIFQLALLCTKRQPSDRPTMHEVTRVLGSLLPSTEPPKPPTITSMAPSAKVPCYKDEYANLETPHVLNCPSMSTSDAQLFLKFGEVISQNSE 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2860305 2870450 + MC11g0368 Mch11g0457 679391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0457 990 SMART serkin_6 657 925 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0457 990 SMART LRR_typ_2 505 528 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 409 433 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 337 361 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 98 122 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 457 480 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 170 194 IPR003591 -
Mch11g0457 990 SMART LRR_typ_2 218 242 IPR003591 -
Mch11g0457 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 30 194 - -
Mch11g0457 990 ProSitePatterns Protein kinases ATP-binding region signature. 663 686 IPR017441 GO:0005524(InterPro)
Mch11g0457 990 Gene3D Transferase(Phosphotransferase) domain 1 733 935 - -
Mch11g0457 990 CDD STKc_IRAK 663 928 - -
Mch11g0457 990 SUPERFAMILY Protein kinase-like (PK-like) 635 925 IPR011009 -
Mch11g0457 990 SUPERFAMILY L domain-like 267 555 - -
Mch11g0457 990 Pfam Leucine Rich Repeat 412 431 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine Rich Repeat 172 191 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine Rich Repeat 101 122 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine Rich Repeat 246 265 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine Rich Repeat 387 409 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine Rich Repeat 530 548 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 305 578 - -
Mch11g0457 990 ProSiteProfiles Protein kinase domain profile. 657 929 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0457 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 308 925 IPR051564 GO:0016020(PANTHER)
Mch11g0457 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 628 732 - -
Mch11g0457 990 Gene3D Ribonuclease Inhibitor 194 267 IPR032675 -
Mch11g0457 990 Gene3D Ribonuclease Inhibitor 449 575 IPR032675 -
Mch11g0457 990 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Mch11g0457 990 Gene3D Ribonuclease Inhibitor 356 448 IPR032675 -
Mch11g0457 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 733 936 - -
Mch11g0457 990 SUPERFAMILY L domain-like 57 324 - -
Mch11g0457 990 Pfam Protein kinase domain 660 922 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0457 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0457 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 195 304 - -
Mch11g0457 990 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Mch11g0457 990 Gene3D Phosphorylase Kinase; domain 1 639 732 - -
Mch11g0457 990 Gene3D Ribonuclease Inhibitor 268 355 IPR032675 -
Mch11g0457 990 Pfam Leucine rich repeat 292 350 IPR001611 GO:0005515(InterPro)
Mch11g0457 990 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0457 Mch-Chr11:2860305 Mch3g1516 Mch-Chr3:17303774 1.84E-72 dispersed
Mch11g0457 Mch-Chr11:2860305 Mch6g2540 Mch-Chr6:27313516 3.66E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77047 PF00069 Pkinase 5.40E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0457 K20718 - csv:101214398 1809.27