Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0473 ATGGTCTGCGAGATGGAGACTGATGTTATTGAAGATATGGACATCGAAGTCCTTCCTTCTATGTGGCCCGAGGACGTTGGACCTGATGTTAGAAAGCAGTTCAATGTCGAAAGGCCAGGAATAGATCAAGATATGTTGGAAGAAGTTAACATAATAGAGGAACCAACAATCGTTGATTTCAAGAGACTTATAGAGTTAACCAACTATACTGAGAAAGGATCTTCTCAATTACAATATCTTGCAAAACAGTGGGAGTATAAGCAAGCAAATGCTGTGCGTCTCCTCAAAGAAGAACTCGACATCCTAAGCAAGCAGAGGAAAGAAGTCGAGCTCAAGAAATTGAAGATATTAGAGGAGCATCTTTTCGAGGAAGAAAGATATGGTGGCGATAAACGTCCAATCTCTATATTGGAAGAATCTTGTGACATATGGCAAGATATTCCGAGGAGAAAAACTGATTTCGTTGTTCAAAGTAAGAGAGTTGAAATTGATGCAGAGTATGATACAGTGACATACTGGAAGCAGCGAACCGTGGATCTGGAAAAATTATTGGAAGCTAGTCTACAGCGAGAGCAAATGCTTGCAGAGAAACTTCAGGAAAATATAAAAAATATTGAAAAGCAGTCCTCACCAGTCGAGGAATTGTCACAGATTCTGAAAAGAGCCGACAACTTTTTGCATTTCGTTCTACAGAATGCACCAGTCGTTTTTGGTCATCAGGACAAAGAATTGCGCTATCGATTTATCTACAATCATTTTCCAAGTTTGGAGGAAGAGGATATTATAGGAAGAACAGACGTTGAGATTTTTAGTGGCGCTGGTGTGAAGGAATCCCAAGATTTCAAGAAAGAAGTTCTGGAGAAAGGGTTGCCTGCAAAGAGGGAAATACAGTTCGATACAGAATTATTTGGGCTGAAGACCTTTCTGATTTACGTTGAACCTGTCTTTAGCAAGGCGGGGGAGACAATTGGAATAAATTATATGGGAATGGACATAACTGATCAGGTTAAAAAACGAGAAAAGATGGCAAAGCTTCGCGAGGAGATAGCAGTACAAAAGGCGAAGGAATCAGAACTGAACAAAACAATCCATATTACAGAGGAGACAATGCGGGCAAAGCAAATGCTAGCAACCATGTCGCATGAAATTAGATCTCCGCTTTCTGGGGTAGTTAGTATGGCTGAAATTCTGTCCACCACAAAACTTGATCGGGAACAACGACATCTGTTGGATGTTATGCTGTCTTCAGGAGACTTGGTGCTTCAACTCATAAACGATATCTTGGATCTTTCTAAAGTTGAATCAGGAGTAATGAGGTTGGAAGCTACAAAGTTCCGTCCAAGAGAGGTTGTAAAACATGTTCTGCAGACTGCTGCTGCATCATTGCGAAAATTCTTAGTTCTGGAGGGGCGTATAGCAGATGATGTTCCTATAGAGGTCATTGGAGATGTTCTTCGGATTCGGCAAATCCTCACCAACCTGATCAGCAACGCAATCAAGTTCACTCCTCAAGGGAAGGTTGGAATCAATCTTTATGTGTTACCTTATCCACCTACTGGGAAAGGAGAAGAATGCCATAAGAAATCAACGGCTAATAACTCAACAGTTTCAGTAAATGGTGTGCAAGAAGGAACATGTCTTCCGTCCCCTCAGAATGGCTTGCGTGGCCAAAGCCACGCTGACAGAAATCATTTACATTGTGAATCGGGTAAAAAGAGCGAAGCCACGGTGAACGGAAATAGAGAAAACAACTCTTGTTCACCCGAAACGACAGTATGGATACGCTGTGATGTATACGACACAGGAATCGGAATAAAAGAAGAGGCATTACCAACCCTTTTTAATAGGTACATGCAAGCTAGTGCTGATCATGCTCGAAAGTATGGAGGGACTGGACTTGGGCTGGCAATATGCAAACAACTGGTTGAGTTGATGGGTGGTCATCTCACCGTTTCTAGCCGAGAGAATCATGGATCTACATTTACATTTGTACTGCCATATAAAGTTTCAACCACCTGCAGTCCTTCCGACGATTCCGACGAGCTCTCAGACGAGGAATCGACAAACGACGAAATGACTGAGGGCTATTTCCAATTCCAACCCCACAGTTTCAGTTCCCTATCATCTTCCAATGGATCCACTAGAATCCCAAATGCCTTGTTACATACAACTGGATATCCTACCTCAACCAAACTCAATGGCTTTGCTGAAAATTCTGTTTCTTTTCCCTCAAACAACATCAAACCAAAAGAAACTGCTTCCATTTCGGCCAATTCCGCGGTAACCTCAAGCGAATCGCAATGTTCATCAAACCAGAACTCAAATCTTGATAACGAGAAACCAACTGATGGACTTCAGCCCGACACTAATTCTCGGCCCCAAAATGTGAGTGTGAATTCCCATCACAGATCAGAAATATCAAAACAAGAAGATACATTGGGAAAGACGAGTAATAAACTCCAGAAAACGGATCAGAGGAAGGAGAGATCCGATGCAAGTTCCCACTGCAGAAGTAGCAGTAGCGGTTCTGAAGCAACGGTGGCATCGGAGCCCAGAATTCTTCTAGTTGAGGATAATAAGACCAATATTATGGTAACTCAGTCAATGATGAAGAAGTTCGGCCATAAAATCGACGTGGTGACCAATGGAATTGAAGCTGTGCGTGCAGTTCAGCGACGTTCATATGATCTCATTCTCATGGATGTTTGTATGCCAGTTATGGATGGTCTTCAAGCTACAAGGTTAATTCGTTCTTTTGAGGAAACGGGAAGTTGGGAAGCAGCTGCAAATGCTGGGATCGACCCAACGACTCCTTGTTGGACCCCATCGTCCTCCCGTCAGAGGATGTCCATCATTGCTATGACGGCGAACGCACTGTCAGAAAGCGCAGATGAGTGTTATGAGAACGGTATGGACTCATTCGTACCAAAGCCGATCACCTTCCAAAAATTGAAGGAGTGTCTTCAACAGTATTTACCACAACGTCCCTTGTAA 2994 42.79 MVCEMETDVIEDMDIEVLPSMWPEDVGPDVRKQFNVERPGIDQDMLEEVNIIEEPTIVDFKRLIELTNYTEKGSSQLQYLAKQWEYKQANAVRLLKEELDILSKQRKEVELKKLKILEEHLFEEERYGGDKRPISILEESCDIWQDIPRRKTDFVVQSKRVEIDAEYDTVTYWKQRTVDLEKLLEASLQREQMLAEKLQENIKNIEKQSSPVEELSQILKRADNFLHFVLQNAPVVFGHQDKELRYRFIYNHFPSLEEEDIIGRTDVEIFSGAGVKESQDFKKEVLEKGLPAKREIQFDTELFGLKTFLIYVEPVFSKAGETIGINYMGMDITDQVKKREKMAKLREEIAVQKAKESELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRHLLDVMLSSGDLVLQLINDILDLSKVESGVMRLEATKFRPREVVKHVLQTAAASLRKFLVLEGRIADDVPIEVIGDVLRIRQILTNLISNAIKFTPQGKVGINLYVLPYPPTGKGEECHKKSTANNSTVSVNGVQEGTCLPSPQNGLRGQSHADRNHLHCESGKKSEATVNGNRENNSCSPETTVWIRCDVYDTGIGIKEEALPTLFNRYMQASADHARKYGGTGLGLAICKQLVELMGGHLTVSSRENHGSTFTFVLPYKVSTTCSPSDDSDELSDEESTNDEMTEGYFQFQPHSFSSLSSSNGSTRIPNALLHTTGYPTSTKLNGFAENSVSFPSNNIKPKETASISANSAVTSSESQCSSNQNSNLDNEKPTDGLQPDTNSRPQNVSVNSHHRSEISKQEDTLGKTSNKLQKTDQRKERSDASSHCRSSSSGSEATVASEPRILLVEDNKTNIMVTQSMMKKFGHKIDVVTNGIEAVRAVQRRSYDLILMDVCMPVMDGLQATRLIRSFEETGSWEAAANAGIDPTTPCWTPSSSRQRMSIIAMTANALSESADECYENGMDSFVPKPITFQKLKECLQQYLPQRPL 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3013763 3021583 + MC11g0380 Mch11g0473 679407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0473 997 SMART REC_2 851 988 IPR001789 GO:0000160(InterPro)
Mch11g0473 997 MobiDBLite consensus disorder prediction 803 834 - -
Mch11g0473 997 Coils Coil 181 215 - -
Mch11g0473 997 CDD HisKA 370 432 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch11g0473 997 CDD HATPase_EvgS-ArcB-TorS-like 487 666 - -
Mch11g0473 997 MobiDBLite consensus disorder prediction 741 848 - -
Mch11g0473 997 SUPERFAMILY CheY-like 850 994 IPR011006 -
Mch11g0473 997 Coils Coil 92 112 - -
Mch11g0473 997 ProSiteProfiles Response regulatory domain profile. 852 992 IPR001789 GO:0000160(InterPro)
Mch11g0473 997 SMART HKATPase_4 482 669 IPR003594 -
Mch11g0473 997 CDD REC_hyHK_CKI1_RcsC-like 853 988 - -
Mch11g0473 997 Pfam Response regulator receiver domain 853 920 IPR001789 GO:0000160(InterPro)
Mch11g0473 997 FunFam Histidine kinase 5 213 348 - -
Mch11g0473 997 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 371 436 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch11g0473 997 Gene3D - 435 673 IPR036890 -
Mch11g0473 997 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 591 667 IPR003594 -
Mch11g0473 997 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 667 IPR036890 -
Mch11g0473 997 PRINTS Bacterial sensor protein C-terminal signature 653 666 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch11g0473 997 PRINTS Bacterial sensor protein C-terminal signature 594 608 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch11g0473 997 PRINTS Bacterial sensor protein C-terminal signature 629 647 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Mch11g0473 997 SMART HisKA_10 371 436 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch11g0473 997 ProSiteProfiles Histidine kinase domain profile. 378 669 IPR005467 -
Mch11g0473 997 Gene3D - 336 434 - -
Mch11g0473 997 Gene3D - 845 992 - -
Mch11g0473 997 Pfam His Kinase A (phospho-acceptor) domain 373 436 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Mch11g0473 997 Gene3D PAS domain 205 335 - -
Mch11g0473 997 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 48 995 - GO:0000155(PANTHER)|GO:0005887(PANTHER)|GO:0009927(PANTHER)|GO:0046777(PANTHER)
Mch11g0473 997 Coils Coil 342 362 - -
Mch11g0473 997 FunFam Histidine kinase 5 845 993 - -
Mch11g0473 997 FunFam Putative histidine kinase 5 359 436 - -
Mch11g0473 997 MobiDBLite consensus disorder prediction 741 802 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0473 Mch-Chr11:3013763 Mch4g1467 Mch-Chr4:18150559 9.66E-50 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42574 PF02518 HATPase_c 3.20E-27 CL0025 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0473 - - - 0.0