Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0475 | ATGGGCTATCTGAATTCAGTATTGTCTTGCTCGAGCCAGATTCATGCTGCCGAGGAGGCACCTGTTAGCGGGGGCGGACTAAGTCAGAATGGAAAGTTCAGCTACGGGTATGCTAGCTCCCCAGGGAAGAGATCTTCAATGGAAGATTTCTACGAGACACGAATAGATGGCGTGGAAGGAGAAATAGTTGGCCTATTTGGCGTTTTTGATGGTCATGGGGGTGCACGGGCTGCTGAGTATGTTAAACACCATCTTTTTAGTAATCTGATCAGGCATCCAAAGTTCATATCAGATACCAAATCAGCAATAGCTGATGCATACAACCATACAGACACAGAATTTCTGAAGTCAGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGCGACCGTTTACTTGTTGCAAATGTGGGTGATTCTAGAGCTGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCCCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGAATTGAGGATGCTGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGATTGTTAAAGCAATATGTCGTCGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCGCTCGAGTTTCTTATACTTGCAAGTGATGGGCTGTGGGATGTCGTCTCTAACGAGGAAGCTGTTGCAATGACTAAACCGATCCAGGACCCAGAAGAGGCAGCGAAGAGGTTGATGCAGGAAGCGTATCAGAGAGGCAGTGCAGACAACATTACTTGTGTCGTTGTTCGTTTCTTGGAAAATCAAGGAAGTCCTTCTCGCGGAACTTCCGGGTAA | 882 | 47.05 | MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHHLFSNLIRHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLENQGSPSRGTSG | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3037149 | 3041687 | - | MC11g0382 | Mch11g0475 | 679409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0475 | 293 | PANTHER | PROTEIN PHOSPHATASE | 30 | 279 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Mch11g0475 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 280 | IPR001932 | - | |
Mch11g0475 | 293 | CDD | PP2Cc | 33 | 280 | IPR001932 | - | |
Mch11g0475 | 293 | ProSitePatterns | PPM-type phosphatase domain signature. | 65 | 73 | IPR000222 | GO:0043169(InterPro) | |
Mch11g0475 | 293 | SMART | PP2C_4 | 24 | 278 | IPR001932 | - | |
Mch11g0475 | 293 | FunFam | probable protein phosphatase 2C 59 | 26 | 284 | - | - | |
Mch11g0475 | 293 | SMART | PP2C_SIG_2 | 45 | 280 | IPR001932 | - | |
Mch11g0475 | 293 | Gene3D | - | 26 | 285 | IPR036457 | - | |
Mch11g0475 | 293 | SUPERFAMILY | PP2C-like | 28 | 280 | IPR036457 | - | |
Mch11g0475 | 293 | Pfam | Protein phosphatase 2C | 63 | 273 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0083 | Mch-Chr10:469414 | Mch11g0475 | Mch-Chr11:3037149 | 6.24E-119 | dispersed | |
Mch11g0475 | Mch-Chr11:3037149 | Mch4g1826 | Mch-Chr4:21120484 | 8.86E-124 | dispersed | |
Mch11g0475 | Mch-Chr11:3037149 | Mch11g1054 | Mch-Chr11:7341252 | 3.27E-61 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0475 | K17506 | - | csv:101216117 | 573.933 |