Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0492 ATGCAGGCAGATCAGACGGCGATAAGTTTGAGACCAGGTGGTGGCGGTGGCCTTCGTGGAACCAGATTTGTTACCCCTCGCTTCGATTCTTCCTCCGCCGATTCCTCGTCGCTCCGTCCACATGGCGGCGCTGTGCCAATCTTCAAGACTGGAGATCTACGGTTCGAAGGTCGTGAGAGAATCCAATACACTCGAGACCAGCTTCTGCAGATTAGGGAGGTTGCAACAGTCCCGGAGGATATATTGAAGGTCAAACTAGAAGTTGAGACTGAGATTGTTGGGGAGGATCAAACATGGGCTCGTTCTGAAAGCATTCCGCAATCACAATCTCAAAGCCGTTACTTTGAGCCTGACAATCGAGACTGGCGTGGTCGATCCGGACTGTTACCTGCCTCTGCAGATGAAGGATCTTGGGAGGCAGCTCGTGAGAATAAGGATTTTTCTGGACAATCTGAATCAAGGTTGCAAGGCTCAAATAATAGGTCTCAAGTTTCTGGTAACCAAGGGGTCGGTACTGCACCTGCCCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTCTGAAGACGGTAAAAGGCATACTTAATAAATTGACCCCAGAAAAGTTTGACGTCCTTAAGGGTCAACTGATTGACTCTGGAATTACAACCGCTGATATTTTAAAGGATGTTATATCTCTTATATTTGAGAAGGCTGTGTTTGAACCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTTAACGAGAAACTTCCACCATTTTCATCTGACGTGCCTGGAGGGAAAGATATCACGTTCAAACGAGTCCTCTTGAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACCTGAGGGTAGAAATCAGGCAGATGGATGATCCTGAGCATGAAATGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGTACTCTAGGAAACATTCGCCTGATAGGTGAGCTTTTAAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTCCTGGAGCTTTTGGGGTCTGATAATAAAGCATGCCCTGCTGAGGAGAATGTTGAGGCTATTTGTCAGTTTTTTAACACAATTGGTAAGCAGCTGGATGAGAGCCCAAAATCTCGGCGGGTCAATGATTTATATTTCAGCAGGTTGAAGGAGCTCACCGCAAACACCCAACTAGCACCAAGGTTAAGATTTATGGTTCGCGATGTTCTTGATTTACGGGCCAATAACTGGGTTCCTAGGCGCGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAGGCCGAGAAGAATCTAGGGCTTCGTCCGGGTTCGATTGCTATGATGAGAAATGGCCGTAATGCTGCTGAGGCTCTTGGAGGATTAAGTCCTGGTGGTTTTCCTGTTGCCCGACCCGGCTTTGGAGGTATGATGCCTGGAATGCCTGGAGCCAGGAAAATGCCTGGTATGCCTGGATTTGATTCAGACAATTGGGAGGTTTCAAGATCCCGAGCAATGCCGAGGGGCGAAAGCGGAGGTCCTACTCAGGCTTCTGCCCGTGTCCAGACACCATTAATCGGCAAAACACCTTCCATCAATTCAAAATATCTACCTCAGGGAAGTGGTGGTGTAATAACGGGTAAAACAAGTGCCTTGTTGCAGGGTAGCGCTGCATCTCCTGCCCGACCAAGTTCCACGCCTGGAACTCAGCCTGTATCTCACAACCCTAGACCAGTTGCTCCGGTTGCATCAGCCATGCCCTCTCCCCAGAAGCCTGCAACTCCTGCTGTGGTGTCCAACTCTGCTGATCTTCACAAGAAAACTGTTTCGCTACTTGAGGAGTACTTCAGCGTACGGATTCTCGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAAACCCCAGCTTATCACCCTGATGTCGTTAAGGAAGCCCTTACCATTGCACTTGAAAAGATTCCACCATGCGTCGACCCAGTTGTTAAGCTTCTCGAGCACTTGCTGAACAAGAATGTCTTGACTGCGAGGGATATAGGTTCCGGGTGCCTTCTGTATGGGTCAATGATGGATGATATCGGCATCGATCTACCCAAAGCACCAAACAATTTTGGTGAGATTCTAGGGAAGCTAGTTTCGATCGGGGGTCTGGATTTCGCCGTTGTGAAGGAGGTTCTTAAGAAGATGGAAGATAATTTTTTCCAGAAAGCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTTGCGACTCAGAGGGTTGAGATTCAGGCATGTGAGAATTTACTTGCGTGA 2331 47.28 MQADQTAISLRPGGGGGLRGTRFVTPRFDSSSADSSSLRPHGGAVPIFKTGDLRFEGRERIQYTRDQLLQIREVATVPEDILKVKLEVETEIVGEDQTWARSESIPQSQSQSRYFEPDNRDWRGRSGLLPASADEGSWEAARENKDFSGQSESRLQGSNNRSQVSGNQGVGTAPALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITTADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPPFSSDVPGGKDITFKRVLLNICQEAFEGADNLRVEIRQMDDPEHEMERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGSDNKACPAEENVEAICQFFNTIGKQLDESPKSRRVNDLYFSRLKELTANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSIAMMRNGRNAAEALGGLSPGGFPVARPGFGGMMPGMPGARKMPGMPGFDSDNWEVSRSRAMPRGESGGPTQASARVQTPLIGKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARPSSTPGTQPVSHNPRPVAPVASAMPSPQKPATPAVVSNSADLHKKTVSLLEEYFSVRILDEALQCVEELKTPAYHPDVVKEALTIALEKIPPCVDPVVKLLEHLLNKNVLTARDIGSGCLLYGSMMDDIGIDLPKAPNNFGEILGKLVSIGGLDFAVVKEVLKKMEDNFFQKAIFGGAMKSLNSSPSGEGILATQRVEIQACENLLA 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3121521 3127058 + MC11g0396 Mch11g0492 679426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0492 776 MobiDBLite consensus disorder prediction 560 580 - -
Mch11g0492 776 ProSiteProfiles MI domain profile. 610 732 IPR003891 -
Mch11g0492 776 MobiDBLite consensus disorder prediction 150 170 - -
Mch11g0492 776 MobiDBLite consensus disorder prediction 100 171 - -
Mch11g0492 776 FunFam Eukaryotic translation initiation factor isoform 4G-2 188 423 - -
Mch11g0492 776 SMART ma3_7 611 723 IPR003891 -
Mch11g0492 776 Gene3D - 188 423 - -
Mch11g0492 776 MobiDBLite consensus disorder prediction 1 43 - -
Mch11g0492 776 Pfam MIF4G domain 197 422 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch11g0492 776 MobiDBLite consensus disorder prediction 100 115 - -
Mch11g0492 776 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 95 772 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Mch11g0492 776 SUPERFAMILY ARM repeat 190 425 IPR016024 -
Mch11g0492 776 MobiDBLite consensus disorder prediction 560 606 - -
Mch11g0492 776 Gene3D - 606 765 - -
Mch11g0492 776 Pfam MA3 domain 612 723 IPR003891 -
Mch11g0492 776 SMART if4_15 197 422 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch11g0492 776 SUPERFAMILY ARM repeat 608 763 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0492 Mch-Chr11:3121521 Mch5g0233 Mch-Chr5:1545586 7.31E-53 dispersed
Mch3g1391 Mch-Chr3:16427976 Mch11g0492 Mch-Chr11:3121521 6.00E-10 transposed
Mch11g0492 Mch-Chr11:3121521 Mch6g0611 Mch-Chr6:4157615 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0492 K03260 - csv:101211356 1254.58