Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0493 | ATGGGTATATACCTCAGCAATCCCAAAACTGAAAAATCCTCTGAAGATGGTGGGAATGGAAGGCTTAGATATGGACTATCATCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCATTTCCTGATCTGGATGCTTGCACTTCATTCTTTGGTGTTTATGACGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTACCTACATCAGCAAATGAAGAAAAATGAAGCTTATGCAGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATTCCTCAGAATGGATGAAATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCTGTTTTGGGTGATAGATTAAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCCCCAAGAAGCAGTGATGCAAATGACCAGGCTGATGATTGGGCTTTTGAAGAGGGTCCGCACTCTGATTTTACTGGCCCGACTTCAGGATGTACAGCTTGTGTTGCAATTATTAGAAATAATCAACTTGTCGTTGCTAATGCTGGTGATTCTCGTTGTGTGATATCAAGAAAGGGTCAGGCTCATAATCTCTCCAGAGATCACAAGCCCGACCTTGAGGCGGAGAGGGAAAGAATTCTGAAGGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAACAAATTTTTACCTGCTGAAAAGCAAATTATCACTGCAAATCCTGATGTAACCACTGTCGAGCTTTCCGATGATGACGAGTTTATGGTTATAGCCTGTGATGGGATATGGGATTGTATGTCCAACCAGCAACTGGTAGATTTTATACATGAACAGCTAGAATCAGAAAGTAAACTCTCTGTGATTTGTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAGAAAGGCATCCATTCGAACACCTCTGCTGATGAGCAAACTTCACCCCCCGCTGCCACCACCCCCACCGAACCAGACAGTGCTGAATCGAAGCAAGGCGATTAA | 1092 | 44.6 | MGIYLSNPKTEKSSEDGGNGRLRYGLSSMQGWRATMEDAHAAFPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQMKKNEAYAAGDIGTSVQKAFLRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPRSSDANDQADDWAFEEGPHSDFTGPTSGCTACVAIIRNNQLVVANAGDSRCVISRKGQAHNLSRDHKPDLEAERERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELSDDDEFMVIACDGIWDCMSNQQLVDFIHEQLESESKLSVICERVLDRCLAPSTAGGEGCDNMTMILVQFKKGIHSNTSADEQTSPPAATTPTEPDSAESKQGD | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3129560 | 3140922 | + | MC11g0397 | Mch11g0493 | 679427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0493 | 363 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) | |
Mch11g0493 | 363 | CDD | PP2Cc | 23 | 329 | IPR001932 | - | |
Mch11g0493 | 363 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch11g0493 | 363 | SMART | PP2C_SIG_2 | 28 | 329 | IPR001932 | - | |
Mch11g0493 | 363 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
Mch11g0493 | 363 | Pfam | Protein phosphatase 2C | 136 | 313 | IPR001932 | - | |
Mch11g0493 | 363 | MobiDBLite | consensus disorder prediction | 335 | 363 | - | - | |
Mch11g0493 | 363 | SUPERFAMILY | PP2C-like | 3 | 330 | IPR036457 | - | |
Mch11g0493 | 363 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 329 | IPR001932 | - | |
Mch11g0493 | 363 | Gene3D | - | 1 | 330 | IPR036457 | - | |
Mch11g0493 | 363 | SMART | PP2C_4 | 13 | 327 | IPR001932 | - | |
Mch11g0493 | 363 | PANTHER | PROTEIN PHOSPHATASE 2C | 21 | 330 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0493 | Mch-Chr11:3129560 | Mch9g0624 | Mch-Chr9:4663637 | 1.91E-35 | dispersed | |
Mch11g0493 | Mch-Chr11:3129560 | Mch8g3003 | Mch-Chr8:32638254 | 3.26E-37 | wgd | |
Mch11g0493 | Mch-Chr11:3129560 | Mch9g0471 | Mch-Chr9:3484858 | 5.45E-212 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0493 | K17499 | - | csv:101211604 | 638.647 |