Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0562 GGTTACCTCAAAGTATACTCTGATGGAACGGTTCGTCGCTTGATCCCTGATGTTGTTGCATCAATGGCTACCCAATCATCTAAGAATTTCAAGTTCAAGGACGTCGTTATCGACCCGAGAAAGGCAGTTACTGGAAGGTTGTTTCTTCCTGATGCTGCTGCTGATGCTGCAGGAAGACTTCCTGTGGTAGTTTACTTTCATGGTGGTGGCTTTTGCATTGGCTCAACTACTTGGATTGGCTATCATCACTTTCTTGGAGACTTGGCTGCTGCATCTCAGTCTGTTATCCTGTCCGTCGACTATCGGCTGGCACCGGAGAATCGGCTTCCTGCAGCTTATGAAGATTGCTACAGCGCACTTGAATGGCTCGGTCATCAAGCGAGTTCTGAGCCATGGTTGCAGCAAGCTGATCTTTCCCACGTCTTCCTTTCCGGGGACAGTGCTGGCGGGAACATTGTCCACAATGTTGCAATCAAAACCATCAAGAGCAACATTTCCAACATGACCATCAAAGGATTGCTGCTAATCCATCCTTATTTTGGGAGTGAAGAGAGAACTGAGAAAGAGAAAGCTGAAGGGGCAGAAGGACATGTCGAAATGAACGATATGTTCTGGCGATTGAGCATACCAGAAGGCAGAAACCGCGATTACTTCGGATGTAACTTCGAGAATGCACAAGTGACTGAAGAAGAATGGAGTCAGTTTCCTGGTGTGGCGGTTTTTGTGGCTGGCTTGGATTTTTTGAAGGAAAGGGGAGTATTGTATGCAAAATTTTTGCAGCAAATGAAAGTAAAGGAGGTTAAGTTGCTGGAAGCTGCAGACGAGTCGCATGTATTTCACGTATTCCATCCTGAATCCGAGGCTACCCGCTTGCTTCAAAAGCAGATGAGTCAATTCATGAAGAGC 906 46.58 GYLKVYSDGTVRRLIPDVVASMATQSSKNFKFKDVVIDPRKAVTGRLFLPDAAADAAGRLPVVVYFHGGGFCIGSTTWIGYHHFLGDLAAASQSVILSVDYRLAPENRLPAAYEDCYSALEWLGHQASSEPWLQQADLSHVFLSGDSAGGNIVHNVAIKTIKSNISNMTIKGLLLIHPYFGSEERTEKEKAEGAEGHVEMNDMFWRLSIPEGRNRDYFGCNFENAQVTEEEWSQFPGVAVFVAGLDFLKERGVLYAKFLQQMKVKEVKLLEAADESHVFHVFHPESEATRLLQKQMSQFMKS 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3606467 3607372 + MC11g0461 Mch11g0562 679496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0562 302 Pfam alpha/beta hydrolase fold 63 280 IPR013094 GO:0016787(InterPro)
Mch11g0562 302 Gene3D alpha/beta hydrolase 3 302 IPR029058 -
Mch11g0562 302 PANTHER ARYLACETAMIDE DEACETYLASE 2 292 IPR050466 -
Mch11g0562 302 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 141 153 IPR033140 -
Mch11g0562 302 SUPERFAMILY alpha/beta-Hydrolases 25 301 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0562 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0562 Mch-Chr11:3606467 Mch8g2393 Mch-Chr8:27009536 1.21E-59 dispersed
Mch11g0562 Mch-Chr11:3606467 Mch11g0271 Mch-Chr11:1711730 3.32E-51 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g474 . . . . . . . . . . . . Car09g00406 . . . . . . . . . . . Cla05g01743 Cam05g1856 Cec05g1868 Cco05g1931 Clacu05g1847 Cmu05g1728 Cre05g1860 . . . . Lsi04g02135 . . . . . . . . . . . Sed13g2029 . Cmo09g00472 Cma09g00463 . . . . . Bhi09g02251 Tan01g3655 . . Hepe01g2028 Mch11g0562 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013730 1 1 0 2 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 1 1 1 1 3 25