Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0569 ATGGAAGCAAATGCGGGAATGGTGGCTGGATCTTACAAGAGGAACGAGCTTGTTCGGATTCGCCACGATTCCGATAGCGGGCCTAAACCTCTGAAGAATTTAAATAGCCAAACATGTCAAATATGTGGCGACACAGTTGGTCTGACAGCCTCCGGTGACATATTCGTTGCTTGCAATGAGTGCGCCTTTCCTGTTTGTCGTCCATGCTATGAGTATGAGAGGAAAGATGGGAACCAGTCTTGCCCTCAGTGCAAGACTAGATACAAGAGGCACAAAGGGAGTCCTCGAGTTGATGGCGATGATGAAGAGGATGATGTAGATGATATAGAAAATGAGTTTAATTACACCCAGGGAAATAGCAAGGCAAAACGACAGTGGCACGGGGAAGATGCTGATCTGTCTACTTCAGCGAGACATGAGTCTCAACAACCTATACCGCTCCTTACCAATGGGCAATCAGTATCGGGCGAAATTCCTTGTGCTACGCCTGACAATCAATCAGTGCGAACAACATCAGGTCCTTTGGGGCCTCCAGAAAAGCATATGCACTCGCATCCATATGTTGATCCACGGCAGCCAGTTCCTGTGAGAATTGTGGACCCATCAAAGGACTTGAATTCTTATGGCCTTGGGAACGTTGACTGGAAGGAAAGAGTGGAAGGTTGGAAACTGAAACAAGAGAAAAACATGATGCAGATGACAAGCAGGTACACTGAAGGGAAGGGGGACATGGAAGGCACTGGATCAAATGGAGAAGAACTTCAAATGGCTGATGATGCTAGACAACCTCTAAGTCGTGTGGTTCCAATTCCATCTTCTCACTTGACCCCATATCGCGTTGTGATCATACTTCGACTTATTATTCTGGGCTTCTTCTTACAGTACCGTTTGACACACCCTGTGAAGGACGCATACCCCTTGTGGTTAACATCAGTTATTTGTGAAGTTTGGTTTGCCTTGTCCTGGCTTCTCGATCAGTTTCCAAAATGGTCTCCCGTCAATCGTGAGACCTTTCTCGAGAGACTCGCTCTAAGATATGACCGCGAAGGCGAACCATCACAATTAGCTCCTGTTGACGTCTTTGTCAGTACAGTGGATCCACTGAAAGAGCCTCCTCTTATCACAGCAAACACTGTACTTTCCATACTTGCTGTGGACTACCCAGTAGATAAAGTCTCCTGCTATGTATCAGATGATGGTTCAGCGATGCTTACTTTCGAAGCACTCTCTGAAACTGCAGAATTTGCAAGGAAGTGGGTGCCCTTTTGCAAGAAGCACAACATCGAGCCAAGAGCCCCTGAATTTTATTTTGCTCAAAAGATAGACTACTTAAAGGACAAGATTCAACCTTCTTTTGTCAAAGAACGTCGAGCAATGAAGAGAGAGTATGAAGAATTCAAGATTCGGACAAATGCCCTTGTTGCCAAAGCACAGAAGATGCCCGAGGAAGGATGGACCATGCAGGATGGAACCCCATGGCCAGGAAACAATCCTAGAGATCATCCTGGAATGATACAGGTTTTTTTAGGCCACAGTGGAGGTCTTGATACTGATGGCAATGAACTACCACGACTTGTTTATGTTTCTCGTGAGAAGCGACCGGGCTTCCAGCATCACAAGAAAGCTGGAGCAATGAATGCATTGATTCGAGTTTCTGCCGTGCTAACTAATGGAGCATATCTTCTTAATGTCGATTGTGATCACTACTTTAACAACAGCAAAGCTCTGAAAGAAGCCATGTGTTTCATGATGGACCCTGCTTATGGAAAGAAAACATGTTATGTACAATTCCCACAACGTTTTGATGGCATTGATTTGCACGATCGATATGCCAATCGCAATATTGTCTTTTTCGATATCAACTTGAAAGGGTTGGATGGCCTCCAGGGTCCTGTCTATGTGGGTACCGGTTGTTGTTTCAACCGGCAAGCTTTATATGGGTATGATCCGGTTCTGACCGAGGCAGATTTGGAACCAAATATTATCATTAAGAGTTGTTGTGGTTCAAGAAAGAAGGGCAGGAACAAGAAGTACATTGACAAAAAGAGAGCTGCAAAAAGGACTGAATCTACCATTCCTATCTTTAATATGGAAGATATCGAGGAAGGTGTTGAAGGATACGATGATGAGAGATCACTCCTGATGTCTCAGAAGAGTTTAGAAAAGCGTTTTGGCCAATCTCCAGTTTTCATCGCAGCCACTTTCATGGAACAGGGAGGTATTCCACCTTCAACCAATCCTGCAACTCTTTTAAAGGAAGCAATTCATGTCATCAGCTGTGGGTATGAAGATAAGACTGAATGGGGCAAGGAGATTGGGTGGATCTATGGTTCTGTAACAGAAGATATTTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATATCGATCTACTGCATGCCTCCACGCCCAGCATTCAAGGGATCTGCTCCCATCAATCTTTCTGATCGTTTAAATCAGGTGCTTCGATGGGCTTTGGGTTCCATAGAGATCTTGCTCAGCAGGCATTGTCCTATCTGGTACGGCTACAATGGAAGGCTAAAGCTTTTGGAGAGGATAGCATACATCAACACTATCGTCTACCCCATCACTTCTATTCCACTTATTGCATACTGTATGCTTCCGGCTTTCTGTCTTTTGACTGGAAAGTTCATCATTCCTGAGATAAGCAACTTCGCGAGTATGTGGTTTATCCTCCTTTTCGTCTCTATCTTCGCAACTGGTATTCTTGAACTTAGGTGGAGTGGAGTTAGCATTGAAGACTGGTGGAGAAATGAACAATTTTGGGTCATTGGTGGTACTTCAGCTCATCTTTTTGCTGTCTTCCAAGGTCTCTTAAAGGTTCTTGCTGGAATCGATACGAACTTCACTGTGACGTCAAAGGCAGGCGACGACGATGGAGATTTTGCAGAGCTTTATGTGTTCAAATGGACTTCTCTCCTCATCCCTCCCACCACTGTCCTTATCATGAATATGGTTGGTATAGTAGCAGGTGTTTCATATGCCATTAACAGTGGTTACCAGTCTTGGGGTCCCCTTTTTGGTAAGCTGTTCTTTGCTTTGTGGGTTATCGTCCATTTATATCCTTTCCTAAAGGGTTTACTGGGAAGGCAAAATCGTACTCCTACCATCGTCATCGTCTGGTCCATTCTTCTTGCTTCCATATTCTCCTTGCTCTGGGTGCGGATTGATCCATTCACCTCGGCCTCGACCAAGGCTGCCAATGGCCAATGTGGTATCAATTGCTAG 3249 44.91 MEANAGMVAGSYKRNELVRIRHDSDSGPKPLKNLNSQTCQICGDTVGLTASGDIFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDEEDDVDDIENEFNYTQGNSKAKRQWHGEDADLSTSARHESQQPIPLLTNGQSVSGEIPCATPDNQSVRTTSGPLGPPEKHMHSHPYVDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNMMQMTSRYTEGKGDMEGTGSNGEELQMADDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRLTHPVKDAYPLWLTSVICEVWFALSWLLDQFPKWSPVNRETFLERLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKIRTNALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGLQGPVYVGTGCCFNRQALYGYDPVLTEADLEPNIIIKSCCGSRKKGRNKKYIDKKRAAKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLIAYCMLPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAGDDDGDFAELYVFKWTSLLIPPTTVLIMNMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSASTKAANGQCGINC 1082
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3634135 3641516 - MC11g0468 Mch11g0569 679503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0569 1082 FunFam Cellulose synthase 21 112 - -
Mch11g0569 1082 CDD mRING-HC-C4C4_CesA 37 87 - -
Mch11g0569 1082 Pfam Cellulose synthase 358 1073 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Mch11g0569 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Mch11g0569 1082 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Mch11g0569 1082 FunFam Cellulose synthase 475 649 - -
Mch11g0569 1082 SUPERFAMILY RING/U-box 22 111 - -
Mch11g0569 1082 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 653 IPR029044 -
Mch11g0569 1082 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 265 1051 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Mch11g0569 1082 MobiDBLite consensus disorder prediction 74 143 - -
Mch11g0569 1082 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Mch11g0569 1082 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 650 IPR029044 -
Mch11g0569 1082 MobiDBLite consensus disorder prediction 161 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0569 Mch-Chr11:3634135 Mch9g0557 Mch-Chr9:4059083 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0569 K10999 - csv:101205724 2187.53