Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0583 ATGACCAGGGATAACATTAATTTCCAAATTGAAGAGTGTTCTGGCAGAATCACGAGGGCGCGAGCAAAAGAGCTGAGCGACACTGGAGGCATTCTATGCTCCTCAAAATCTTCTGGAGATCAGAAGCACATTCTACGAGTTAACTCGAAAAGAATGGCATCTGATGACATTAAAATTTCTTCAACTTCCTCCAATGGCCTTCCTAATAAGAGAAGAGCAGTTCTCAAGGACGTGACTAACATTTCCAGAAAAGGTTATGAAAAGAATTGCATTAACGCTTCTAATATTCAGGGTGCCAAACCAACTAGAAGAGTTTCTGCAAAAGCTAAGGGAAATGTGCCCTTAAATGTTTCTGTAGAAATTCTAGGAGCGGAAGAAGATGCAAACACAAGACTAGCTGAAGATTTATCTAAAATAAGGGTTGTAGAATCGCGAGAGACCTCTTTACGAGAAACTATGGACGAAAAAGAGAGACTAATGCAAAATACGTGTCTCACAAGCAGAGAATGTGGAGTTTCAGATATGATGCTCTCTGTTTCTTCAGAAGAATCAATCCCGCGGCCAAATGAAAAACATACGGTACCTGAACAATCGGGAGCATCAAATGATAGAGGTATTATAGACATCGATTCAAACTCAAAATGTCTTCAATCATGCAGCATATATGCCCCAGACATATATGACAGGATACGTGTGACGGAGCTTGATCAAAGGCCCTCAACTATCTATATGGAACAGTTGCAGCGAGATATCACTGCAAACATGCGAGGAATACTGGTTGATTGGCTTGTAGAGGTTTCTGAAGAATATAAGCTGGTTCCAGATACACTATATCTCACTGTGAATGTTATCGATCGGTTTCTCTCTCAAAACTATATTGAAAAAAAGCGTCTACAACTCCTCGGTGTTTCAAGCATGCTAATTGCATCAAAATACGAGGAGATCTGTGCACCGCGAGTGGAAGATTTCTGCTTCATTACAGACAATACTTACACAAAAGGAGAGGTAGTAGAAATGGAGAGCGAAGTTCTGAATTTACTGCACTTCCGGCTATCTGTTCCCACTACAAAGACATTTCTAAGGAGATTCATACAATCAGCTCATGCTTCTTACAAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCTCTGATAGCCGCATCAGCCGTATTTCTTGCGAGATGGACACTTGACCAATCGGATCATCCGTGGAACCCAACTCTGGAGCACTATACCAGTTACAGCGTTTCTGAACTGAAAACTCCAGTGCTTGCCCTTCAAGAATTGCAACTTAACACCAGCGGTTCTTCCCTAAATGTCATACGTGAGAAGTACAAACAAACAAAGTTCAAATGCGTAGCGACATTAACATCCACTAGATCGATTCTATCACTGTTCTGA 1455 41.03 MTRDNINFQIEECSGRITRARAKELSDTGGILCSSKSSGDQKHILRVNSKRMASDDIKISSTSSNGLPNKRRAVLKDVTNISRKGYEKNCINASNIQGAKPTRRVSAKAKGNVPLNVSVEILGAEEDANTRLAEDLSKIRVVESRETSLRETMDEKERLMQNTCLTSRECGVSDMMLSVSSEESIPRPNEKHTVPEQSGASNDRGIIDIDSNSKCLQSCSIYAPDIYDRIRVTELDQRPSTIYMEQLQRDITANMRGILVDWLVEVSEEYKLVPDTLYLTVNVIDRFLSQNYIEKKRLQLLGVSSMLIASKYEEICAPRVEDFCFITDNTYTKGEVVEMESEVLNLLHFRLSVPTTKTFLRRFIQSAHASYKVPCIELEFLANYLAELTLVEYSFLKFLPSLIAASAVFLARWTLDQSDHPWNPTLEHYTSYSVSELKTPVLALQELQLNTSGSSLNVIREKYKQTKFKCVATLTSTRSILSLF 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3718821 3725181 + MC11g0482 Mch11g0583 679517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0583 484 SUPERFAMILY Cyclin-like 353 476 IPR036915 -
Mch11g0583 484 PANTHER CYCLINS 203 465 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch11g0583 484 ProSitePatterns Cyclins signature. 256 287 IPR048258 -
Mch11g0583 484 Pfam Cyclin, C-terminal domain 354 475 IPR004367 -
Mch11g0583 484 SUPERFAMILY Cyclin-like 217 351 IPR036915 -
Mch11g0583 484 FunFam Cyclin A1 341 473 - -
Mch11g0583 484 CDD CYCLIN_AtCycA-like_rpt2 354 468 - -
Mch11g0583 484 Gene3D - 225 473 - -
Mch11g0583 484 CDD CYCLIN_AtCycA_like_rpt1 217 350 - -
Mch11g0583 484 Pfam Cyclin, N-terminal domain 225 352 IPR006671 -
Mch11g0583 484 MobiDBLite consensus disorder prediction 180 205 - -
Mch11g0583 484 SMART Cyclin_C_2 354 477 IPR004367 -
Mch11g0583 484 Gene3D - 239 352 - -
Mch11g0583 484 FunFam Mitotic cyclin 6 239 339 - -
Mch11g0583 484 PIRSF Cyclin_A_B_D_E 31 483 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Mch11g0583 484 SMART cyclin_7 358 446 IPR013763 -
Mch11g0583 484 SMART cyclin_7 261 345 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0059 Mch-Chr11:387350 Mch11g0583 Mch-Chr11:3718821 2.74E-52 dispersed
Mch11g0583 Mch-Chr11:3718821 Mch9g0378 Mch-Chr9:2821132 4.06E-142 dispersed
Mch4g1794 Mch-Chr4:20870820 Mch11g0583 Mch-Chr11:3718821 4.30E-99 transposed
Mch11g0583 Mch-Chr11:3718821 Mch8g0407 Mch-Chr8:2899062 4.99E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0583 K06627 - csv:101204275 824.698