Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0616 ATGCCTCGTAAGGTGAGCCACGGTCTTGATTACGACGAAGATTACGACGACTATGAGGATTATGATTATTACGACAACGATTTTGAAGTAGAAGAAAAAGGCAAAACACATGAGACTAAGGAAGAAACTAAGGGGCATAAGCTTTGGCGATGTCCAATTTGTACTTACGACAATGAAGACAGTTTTTCTGCATGTGATATATGTGGGGTTCTGCGCATCCCTTTGGTCAACAACAGCAATACTCGCGATGATAGAACAGTTGAGAACATTTGCAAAGACTCCGGAGTATCTATAATGGCCAAGTCTCTATTTGCATCATCAATGCCGAAACAGATACCTAAAAGTGCTGTAAAATTTCAAGAGCAGAATGAGGAATTTGTGGAGGAAAGGGAAGGTAACATCCACAAGATTGGGAATATCCGGGGCCATTTGCATGAATTCCATAAGGCTTTTAGTACCCGTAGTCAGTTCCGTACTAATATAGTCCCTTTCAAGTTTGATATTCCATCCCCAGATGATGTGGTTTCTAATGGAATGCGTTCCTCCAAAGTTGGTTTAAAAGCGGTCAGCCATACAGAGTTCAACTCTTCAGTATTTTCTTCAGGCATAACTAAGGAAGGTGCAAATAATGCAACATTGACTTCAAAAAGTGCATCATCTGCTATATTGCCAAAGGGCAAATTAGACAGTCTAGGAGATAGTAAATCAAGTACCAAAAGTTCAAACAGCTCGGGCTCCTCAATTGGAAAAAGTACAGCGGTCGTTGAAGAGCGTAGTACATCAATTAGTGCAACTATGAACTTACAATCACATGATAACAGGTCATCAAGCACTTCCACATCAAAGTCTGCAGGCAAATTTGGCCGCACGGATGAGAGCAGTAACTCTTCTGTGGAGCGGGAAAAGCCCCAAAATCTTGCCAGTGGTTTGAACAACATGGTTCTAAATGTCAAATCTGCCTATGCAAATTATATTAATGGGCTAGGAAAAACGTCAAATGTGCAGTATAAACATGATAAATGGATGCTGCCTGATCAAGCTGCCGATAATTTGACTCAGCTGAATCTTGCTATAGTCGGTCATGTTGATTCTGGAAAGTCAACTCTTTCTGGAAGACTTTTGCACCTATTGGGACGTGTATCCCAAAAAGAAATGCACAAATATGAAAAAGAAGCAAAGTCCCAGGGCAAGGGTTCCTTTGCTTATGCCTGGGCACTGGATGAGAGTGCAGAGGAAAGGGAGAGAGGAATAACTATGACTGTTGGTGTTGCTTATTTTGATTCCAAAAGGTATCATGTTGTTGTGCTTGATTCTCCAGGCCATAAAGATTTTGTTCCAAACTTGATATCTGGGGCAACACAAGCCGATGCTGCGATTCTTGTTATAGATGCCTCTGTTGGTGCATTTGAAGCCGGTTTGGACAGTTCAAAGGGGCAAACAAGAGAACACGTGCAATTGATCAGAAGCTTTGGTGTTGATCAGATTATTGTTGCAGTTAACAAACTGGATGTGGTGAAGTATTCCAAAGATCGCTATGACTTTATTAAGTTGCAACTTGGAACATTTTTTCGTTCTTGTGGTTATAAAGATTCATCATTGACTTGGATTCCATTGAGTGCCATGGCAAATCAAAATCTGGTGACTGCCCCTTCTGATGCTCAATTTTTGTCCTGGTATCGTGGACCTAATCTGTTGGAGGCAATTGATTCCCTTCAACCACCCACCAGAGATTTCTCAAAGCCACTGCTTATGCCGGTATGCGACGTTATTAAATCACTTTCTCTAGGACAAGTGTCTGCCTGTGGTAAACTGGAAGCTGGAGCTCTCCAGTCTGGATCCAAGGTTCTAGTCATGCCATCTGGAGATAAAGGCACTGTGCGCACTTTAGAACGCAATTCTCAGGCGTGCAAGATTGCTAGAGCAGGAGACAATGTGACCGTTACTCTACAAGGAGTCGAAGCAAGTAGCGTGATGGCTGGGGGAGTTCTATGCCATCCTGATTTTCCTGTTGCTGTTGCAAAACATTTGGAATTGAAAATTCTCACCTTGGAATTTGCTACGCCGATATTGATAGGATCTCAGTTGGAAGTTCATGTACACCACGCGAAGGAGGCTGCTAGAGTTGCAAGGATAGTGTCGTTGATTGATTCAAAGACGGGAAAGGTCGCAAAGAAGGCGCCGCGTTGCCTCAGTGCTAAACAAAGTGCAGTGATTGAGGTTGTTTTGCCAAGTCCAGTTTGTGTGGAAGCATTCTCGACTAGTCGGGCTCTCGGGAGGGTGTTTCTGAGAGCGTTGGGCAGAACCATAGCGGTCGGCATTGTGACCCAACTAATTGGAGATCCTGAGTAA 2349 43.17 MPRKVSHGLDYDEDYDDYEDYDYYDNDFEVEEKGKTHETKEETKGHKLWRCPICTYDNEDSFSACDICGVLRIPLVNNSNTRDDRTVENICKDSGVSIMAKSLFASSMPKQIPKSAVKFQEQNEEFVEEREGNIHKIGNIRGHLHEFHKAFSTRSQFRTNIVPFKFDIPSPDDVVSNGMRSSKVGLKAVSHTEFNSSVFSSGITKEGANNATLTSKSASSAILPKGKLDSLGDSKSSTKSSNSSGSSIGKSTAVVEERSTSISATMNLQSHDNRSSSTSTSKSAGKFGRTDESSNSSVEREKPQNLASGLNNMVLNVKSAYANYINGLGKTSNVQYKHDKWMLPDQAADNLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSQGKGSFAYAWALDESAEERERGITMTVGVAYFDSKRYHVVVLDSPGHKDFVPNLISGATQADAAILVIDASVGAFEAGLDSSKGQTREHVQLIRSFGVDQIIVAVNKLDVVKYSKDRYDFIKLQLGTFFRSCGYKDSSLTWIPLSAMANQNLVTAPSDAQFLSWYRGPNLLEAIDSLQPPTRDFSKPLLMPVCDVIKSLSLGQVSACGKLEAGALQSGSKVLVMPSGDKGTVRTLERNSQACKIARAGDNVTVTLQGVEASSVMAGGVLCHPDFPVAVAKHLELKILTLEFATPILIGSQLEVHVHHAKEAARVARIVSLIDSKTGKVAKKAPRCLSAKQSAVIEVVLPSPVCVEAFSTSRALGRVFLRALGRTIAVGIVTQLIGDPE 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3969141 3975679 + MC11g0513 Mch11g0616 679550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0616 782 PRINTS GTP-binding elongation factor signature 434 444 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 PRINTS GTP-binding elongation factor signature 355 368 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 PRINTS GTP-binding elongation factor signature 450 461 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 PRINTS GTP-binding elongation factor signature 495 504 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 PRINTS GTP-binding elongation factor signature 414 422 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 ProSitePatterns Zinc finger RanBP2-type signature. 49 68 IPR001876 -
Mch11g0616 782 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 674 778 IPR009001 -
Mch11g0616 782 Gene3D Translation factors 672 779 - -
Mch11g0616 782 FunFam Elongation factor 1 alpha-like protein 343 575 - -
Mch11g0616 782 CDD HBS1_C_III 669 777 - -
Mch11g0616 782 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 351 582 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 PANTHER TRANSLATION FACTOR 352 775 IPR050100 GO:0003924(PANTHER)|GO:0006412(PANTHER)
Mch11g0616 782 Pfam Elongation factor Tu GTP binding domain 354 573 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Mch11g0616 782 Pfam Elongation factor Tu domain 2 601 664 IPR004161 GO:0005525(InterPro)
Mch11g0616 782 CDD EF1_alpha 355 574 - -
Mch11g0616 782 SUPERFAMILY Translation proteins 573 668 IPR009000 -
Mch11g0616 782 MobiDBLite consensus disorder prediction 231 292 - -
Mch11g0616 782 FunFam elongation factor 1-alpha isoform X4 672 781 - -
Mch11g0616 782 Gene3D - 343 575 IPR027417 -
Mch11g0616 782 Pfam GTP-eEF1A C-terminal domain-like 676 775 IPR054696 -
Mch11g0616 782 CDD HBS1-like_II 581 665 - -
Mch11g0616 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 591 IPR027417 -
Mch11g0616 782 SUPERFAMILY Ran binding protein zinc finger-like 45 72 IPR036443 -
Mch11g0616 782 Gene3D Translation factors 579 668 - -
Mch11g0616 782 FunFam Translation elongation factor EF-1 578 668 - -
Mch11g0616 782 MobiDBLite consensus disorder prediction 224 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0616 Mch-Chr11:3969141 Mch2g0371 Mch-Chr2:2759018 1.12E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0616 K14416 - csv:101219939 1245.72