Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0616 | ATGCCTCGTAAGGTGAGCCACGGTCTTGATTACGACGAAGATTACGACGACTATGAGGATTATGATTATTACGACAACGATTTTGAAGTAGAAGAAAAAGGCAAAACACATGAGACTAAGGAAGAAACTAAGGGGCATAAGCTTTGGCGATGTCCAATTTGTACTTACGACAATGAAGACAGTTTTTCTGCATGTGATATATGTGGGGTTCTGCGCATCCCTTTGGTCAACAACAGCAATACTCGCGATGATAGAACAGTTGAGAACATTTGCAAAGACTCCGGAGTATCTATAATGGCCAAGTCTCTATTTGCATCATCAATGCCGAAACAGATACCTAAAAGTGCTGTAAAATTTCAAGAGCAGAATGAGGAATTTGTGGAGGAAAGGGAAGGTAACATCCACAAGATTGGGAATATCCGGGGCCATTTGCATGAATTCCATAAGGCTTTTAGTACCCGTAGTCAGTTCCGTACTAATATAGTCCCTTTCAAGTTTGATATTCCATCCCCAGATGATGTGGTTTCTAATGGAATGCGTTCCTCCAAAGTTGGTTTAAAAGCGGTCAGCCATACAGAGTTCAACTCTTCAGTATTTTCTTCAGGCATAACTAAGGAAGGTGCAAATAATGCAACATTGACTTCAAAAAGTGCATCATCTGCTATATTGCCAAAGGGCAAATTAGACAGTCTAGGAGATAGTAAATCAAGTACCAAAAGTTCAAACAGCTCGGGCTCCTCAATTGGAAAAAGTACAGCGGTCGTTGAAGAGCGTAGTACATCAATTAGTGCAACTATGAACTTACAATCACATGATAACAGGTCATCAAGCACTTCCACATCAAAGTCTGCAGGCAAATTTGGCCGCACGGATGAGAGCAGTAACTCTTCTGTGGAGCGGGAAAAGCCCCAAAATCTTGCCAGTGGTTTGAACAACATGGTTCTAAATGTCAAATCTGCCTATGCAAATTATATTAATGGGCTAGGAAAAACGTCAAATGTGCAGTATAAACATGATAAATGGATGCTGCCTGATCAAGCTGCCGATAATTTGACTCAGCTGAATCTTGCTATAGTCGGTCATGTTGATTCTGGAAAGTCAACTCTTTCTGGAAGACTTTTGCACCTATTGGGACGTGTATCCCAAAAAGAAATGCACAAATATGAAAAAGAAGCAAAGTCCCAGGGCAAGGGTTCCTTTGCTTATGCCTGGGCACTGGATGAGAGTGCAGAGGAAAGGGAGAGAGGAATAACTATGACTGTTGGTGTTGCTTATTTTGATTCCAAAAGGTATCATGTTGTTGTGCTTGATTCTCCAGGCCATAAAGATTTTGTTCCAAACTTGATATCTGGGGCAACACAAGCCGATGCTGCGATTCTTGTTATAGATGCCTCTGTTGGTGCATTTGAAGCCGGTTTGGACAGTTCAAAGGGGCAAACAAGAGAACACGTGCAATTGATCAGAAGCTTTGGTGTTGATCAGATTATTGTTGCAGTTAACAAACTGGATGTGGTGAAGTATTCCAAAGATCGCTATGACTTTATTAAGTTGCAACTTGGAACATTTTTTCGTTCTTGTGGTTATAAAGATTCATCATTGACTTGGATTCCATTGAGTGCCATGGCAAATCAAAATCTGGTGACTGCCCCTTCTGATGCTCAATTTTTGTCCTGGTATCGTGGACCTAATCTGTTGGAGGCAATTGATTCCCTTCAACCACCCACCAGAGATTTCTCAAAGCCACTGCTTATGCCGGTATGCGACGTTATTAAATCACTTTCTCTAGGACAAGTGTCTGCCTGTGGTAAACTGGAAGCTGGAGCTCTCCAGTCTGGATCCAAGGTTCTAGTCATGCCATCTGGAGATAAAGGCACTGTGCGCACTTTAGAACGCAATTCTCAGGCGTGCAAGATTGCTAGAGCAGGAGACAATGTGACCGTTACTCTACAAGGAGTCGAAGCAAGTAGCGTGATGGCTGGGGGAGTTCTATGCCATCCTGATTTTCCTGTTGCTGTTGCAAAACATTTGGAATTGAAAATTCTCACCTTGGAATTTGCTACGCCGATATTGATAGGATCTCAGTTGGAAGTTCATGTACACCACGCGAAGGAGGCTGCTAGAGTTGCAAGGATAGTGTCGTTGATTGATTCAAAGACGGGAAAGGTCGCAAAGAAGGCGCCGCGTTGCCTCAGTGCTAAACAAAGTGCAGTGATTGAGGTTGTTTTGCCAAGTCCAGTTTGTGTGGAAGCATTCTCGACTAGTCGGGCTCTCGGGAGGGTGTTTCTGAGAGCGTTGGGCAGAACCATAGCGGTCGGCATTGTGACCCAACTAATTGGAGATCCTGAGTAA | 2349 | 43.17 | MPRKVSHGLDYDEDYDDYEDYDYYDNDFEVEEKGKTHETKEETKGHKLWRCPICTYDNEDSFSACDICGVLRIPLVNNSNTRDDRTVENICKDSGVSIMAKSLFASSMPKQIPKSAVKFQEQNEEFVEEREGNIHKIGNIRGHLHEFHKAFSTRSQFRTNIVPFKFDIPSPDDVVSNGMRSSKVGLKAVSHTEFNSSVFSSGITKEGANNATLTSKSASSAILPKGKLDSLGDSKSSTKSSNSSGSSIGKSTAVVEERSTSISATMNLQSHDNRSSSTSTSKSAGKFGRTDESSNSSVEREKPQNLASGLNNMVLNVKSAYANYINGLGKTSNVQYKHDKWMLPDQAADNLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSQGKGSFAYAWALDESAEERERGITMTVGVAYFDSKRYHVVVLDSPGHKDFVPNLISGATQADAAILVIDASVGAFEAGLDSSKGQTREHVQLIRSFGVDQIIVAVNKLDVVKYSKDRYDFIKLQLGTFFRSCGYKDSSLTWIPLSAMANQNLVTAPSDAQFLSWYRGPNLLEAIDSLQPPTRDFSKPLLMPVCDVIKSLSLGQVSACGKLEAGALQSGSKVLVMPSGDKGTVRTLERNSQACKIARAGDNVTVTLQGVEASSVMAGGVLCHPDFPVAVAKHLELKILTLEFATPILIGSQLEVHVHHAKEAARVARIVSLIDSKTGKVAKKAPRCLSAKQSAVIEVVLPSPVCVEAFSTSRALGRVFLRALGRTIAVGIVTQLIGDPE | 782 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3969141 | 3975679 | + | MC11g0513 | Mch11g0616 | 679550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0616 | 782 | PRINTS | GTP-binding elongation factor signature | 434 | 444 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | PRINTS | GTP-binding elongation factor signature | 355 | 368 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | PRINTS | GTP-binding elongation factor signature | 450 | 461 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | PRINTS | GTP-binding elongation factor signature | 495 | 504 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | PRINTS | GTP-binding elongation factor signature | 414 | 422 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | ProSitePatterns | Zinc finger RanBP2-type signature. | 49 | 68 | IPR001876 | - | |
Mch11g0616 | 782 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 674 | 778 | IPR009001 | - | |
Mch11g0616 | 782 | Gene3D | Translation factors | 672 | 779 | - | - | |
Mch11g0616 | 782 | FunFam | Elongation factor 1 alpha-like protein | 343 | 575 | - | - | |
Mch11g0616 | 782 | CDD | HBS1_C_III | 669 | 777 | - | - | |
Mch11g0616 | 782 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 351 | 582 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | PANTHER | TRANSLATION FACTOR | 352 | 775 | IPR050100 | GO:0003924(PANTHER)|GO:0006412(PANTHER) | |
Mch11g0616 | 782 | Pfam | Elongation factor Tu GTP binding domain | 354 | 573 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g0616 | 782 | Pfam | Elongation factor Tu domain 2 | 601 | 664 | IPR004161 | GO:0005525(InterPro) | |
Mch11g0616 | 782 | CDD | EF1_alpha | 355 | 574 | - | - | |
Mch11g0616 | 782 | SUPERFAMILY | Translation proteins | 573 | 668 | IPR009000 | - | |
Mch11g0616 | 782 | MobiDBLite | consensus disorder prediction | 231 | 292 | - | - | |
Mch11g0616 | 782 | FunFam | elongation factor 1-alpha isoform X4 | 672 | 781 | - | - | |
Mch11g0616 | 782 | Gene3D | - | 343 | 575 | IPR027417 | - | |
Mch11g0616 | 782 | Pfam | GTP-eEF1A C-terminal domain-like | 676 | 775 | IPR054696 | - | |
Mch11g0616 | 782 | CDD | HBS1-like_II | 581 | 665 | - | - | |
Mch11g0616 | 782 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 353 | 591 | IPR027417 | - | |
Mch11g0616 | 782 | SUPERFAMILY | Ran binding protein zinc finger-like | 45 | 72 | IPR036443 | - | |
Mch11g0616 | 782 | Gene3D | Translation factors | 579 | 668 | - | - | |
Mch11g0616 | 782 | FunFam | Translation elongation factor EF-1 | 578 | 668 | - | - | |
Mch11g0616 | 782 | MobiDBLite | consensus disorder prediction | 224 | 305 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0616 | Mch-Chr11:3969141 | Mch2g0371 | Mch-Chr2:2759018 | 1.12E-86 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0616 | K14416 | - | csv:101219939 | 1245.72 |