Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0624 ATGGCGAACAACAACGCTATCACTCTCCAAGAGATTCGAAACGAGTCCGTCGATCTGGAACGTATTCCAATCAACGAAGTGTTCGATAAGTTAAAATGCTCAAGAGAAGGTCTCACTTCAGAGGAAGGAGCCAGTCGGCTTCAAGTTTTTGGACCCAACAAACTCGAAGAGAAAAAGGAGAGCAAAGTTCTCAAATTTCTAGGATTTATGTGGAATCCCCTATCTTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTAGCAAACGGCGGTGGAAGGCCTCCAGACTGGCAGGATTTCGTGGGCGTCATTGCCCTACTTTTCATCAACTCAACCATCAGCTTTATTGAAGAAAACAACGCAGGCAATGCAGCTGCCGCCCTTATGGCCGGTCTTGCTCCCAAAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGATGCTGCTATTCTGGTTCCTGGAGATATAATAAGTATCAAACTAGGAGACATCATACCTGCGGATGCTCGTCTTCTTGAGGGCGACCCTTTGAAAATTGATCAATCTGCTTTAACCGGTGAATCCCTCCCTGTTACGAAGAACCCTTCAGATGAAGTTTTTTCAGGATCCACGTGTAAACAGGGTGAAATTGAAGCAGTAGTGATTGCCACTGGTGTGCATACCTTCTTTGGCAAGGCTGCCCATTTGGTGGACAGCACCAATCAAGTTGGGCATTTCCAAAAAGTTCTTACTGCCATTGGGAATTTCTGTATTTGCTCCATTGCTATTGGAATTTTTATTGAGATCATAGTCATGTACCCAATACAACATCGTGCCTATAGGGACGGCATTGACAATTTGCTGGTGCTTTTGATCGGAGGAATTCCTATTGCCATGCCTACTGTTTTGTCTGTCACCATGGCCATTGGCTCACACCGTCTTTCGAAGCAAGGCGCAATTACCAAGCGCATGACTGCCATCGAGGAGATGGCAGGCATGGATGTCCTCTGCAGTGACAAGACTGGAACATTAACCTTGAATAAGCTCACTGTTGACAAAACCTTGATTGAAGTCTTTGTGGAGGATGTCGACGCAGAACATGTTCTCCTTCTTGCAGGAAGGGCTTCTAGAACAGAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGTTAGCAGATCCAAAAGAGGCACGAGCTGGTATTAGAGAGGTTCATTTTTTCCCATTCAACCCTGTAGATAAGAGAACTGCTCTGACTTATATTGATTCTAATGATAACTGGCACCGAGTTAGCAAAGGTGCTCCAGAGCAGATTTTAAACCTTTGCAATTCCAGTGAAGTCGTCAGGAAACGAGTTCATGGAGTAATTGATAAGTTTGCTGAATGCGGACTCCGATCCCTGGGTGTTGCTAGACAGAAAGTACCTGAGAGAACCAAAGAAAGTCCAGGAGAACCGTGGCAACTTGTTGGTTTGTTAGCTCTGTTTGATCCTCCAAGGCATGATAGTGCAGAAACCATCAGAAGGGCTTTGAACCTTGGAGTAAATGTCAAGATGATTACTGGGGACCAACTGGCCATTGCCAAGGAAACTGGGCGGAGACTTGGTATGGGAACAAATATGTACCCTTCTTCTTCATTACTTAGTCAAGGTAGAGATAGATCAGCAGATACCCTTCCTGTGGATGAGTTGATTGAAAAGGCTGATGGATTTGCTGGTGTATTTCCAGTTCTCCTATATATCCAGTGTCACACATTGCTTTCCTTAACGTTTTTGCATATGGCAGAACACAAATATGAAATTGTAAAAAGGTTACAGGAGAGGAAACACATTTGTGGAATGACTGGAGATGGTGTAAATGATGCCCCTGCACTAAAGAAAGCTGATATTGGAATTGCTGTTGCTGATGCAACTGATGCAGCTAGGGGCGCTTCCGACATCGTCCTCACTGAACCGGGATTAAGTGTCATTATCAGTGCTGTACTGACTAGCAGGGCTATTTTTCAGAGGATGAAGAACTATACCATTTATGCAGTTTCCATCACCATTCGTATAGTGTTTGGTTTTATGTTGATTGCTTTGATTTGGAAGTTTGATTTCGCTCCATTCATGGTTTTAATTATAGCAATTCTAAACGATGGAACAATCATGACCATTTCTAAGGATCGAGTTAAGCCTTCTCCTCTGCCGGACAGCTGGAAGTTGAAGGAAATTTTCGCTACTGGCATTGTGTTAGGAGGATACTTGGCACTGATGACAGTGATATTCTTCTGGATCGTGAGAGATACCGACTTTTTCTCGAACAAGTTTCATGTACAATCCCTGAGGAACAACGACGAGGCAATGATGGCAGCATTGTACCTACAAGTTAGTATCGTGAGTCAGGCCCTTATCTTCGTCACAAGGTCTCGAAGTTGGTCCTTTGTCGAACGTCCTGGACTGCTCTTAGTGAGTGCTTTCATAATTGCCCAGCTGGTAGCAACATTAATAGCAGTGTATGCAAATTGGGAATTTGCAAGGATAAAAGGAGCCGGCTGGGGATGGGCTGGTGTGATCTGGCTCTATAGTTTGGTAACATATATCCCTCTTGATCTTCTCAAATTTGCCATTCGCTATGTTCACAGTGGAAGGGCCTGGAATAATCTTTTGCAAAATAAGACTGCTTTCACAACAAAGAAAGATTATGGCAAAGAAGAGAGAGAAGCTCAGTGGGCTACCACCCAAAGGACCATCCATGGTCTTCAACCACCCCAACCCAACAACCTTACTTCTGATAGGGGTAACTACGGTGAGCTTTCGGAGATCGCCGAGCAAGCCCGACGTCGGGCTGAAATTGCAAGGCTCCGCGAGTTGCATACTCTTAAGGGTCGGGTCGAGTCGGTGGTGAAGTTGAAGGGATTGGACATCGACACGATTCACCAACATTATACCGTCTAA 2922 44.8 MANNNAITLQEIRNESVDLERIPINEVFDKLKCSREGLTSEEGASRLQVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGVIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIFIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFVEDVDAEHVLLLAGRASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSNDNWHRVSKGAPEQILNLCNSSEVVRKRVHGVIDKFAECGLRSLGVARQKVPERTKESPGEPWQLVGLLALFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSQGRDRSADTLPVDELIEKADGFAGVFPVLLYIQCHTLLSLTFLHMAEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWIVRDTDFFSNKFHVQSLRNNDEAMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFIIAQLVATLIAVYANWEFARIKGAGWGWAGVIWLYSLVTYIPLDLLKFAIRYVHSGRAWNNLLQNKTAFTTKKDYGKEEREAQWATTQRTIHGLQPPQPNNLTSDRGNYGELSEIAEQARRRAEIARLRELHTLKGRVESVVKLKGLDIDTIHQHYTV 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4012489 4020194 + MC11g0518 Mch11g0624 679558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0624 973 Pfam E1-E2 ATPase 134 312 - -
Mch11g0624 973 Gene3D - 344 491 IPR023299 GO:0000166(InterPro)
Mch11g0624 973 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Mch11g0624 973 SFLD Haloacid Dehalogenase 314 661 - -
Mch11g0624 973 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch11g0624 973 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch11g0624 973 PRINTS H+-transporting ATPase (proton pump) signature 782 803 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch11g0624 973 Gene3D - 135 219 - -
Mch11g0624 973 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Mch11g0624 973 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Mch11g0624 973 CDD P-type_ATPase_H 37 863 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch11g0624 973 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 354 495 IPR023299 GO:0000166(InterPro)
Mch11g0624 973 SUPERFAMILY HAD-like 330 703 IPR036412 -
Mch11g0624 973 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 828 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch11g0624 973 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 869 IPR023298 -
Mch11g0624 973 Gene3D - 97 837 - -
Mch11g0624 973 PANTHER CALCIUM-TRANSPORTING ATPASE 20 897 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 610 629 - -
Mch11g0624 973 PRINTS P-type cation-transporting ATPase superfamily signature 633 645 - -
Mch11g0624 973 FunFam Plasma membrane ATPase 135 219 - -
Mch11g0624 973 FunFam Plasma membrane ATPase 584 658 - -
Mch11g0624 973 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Mch11g0624 973 FunFam ATPase 4 plasma membrane-type 594 837 - -
Mch11g0624 973 Gene3D - 922 973 - -
Mch11g0624 973 Gene3D - 329 647 IPR023214 -
Mch11g0624 973 FunFam Plasma membrane ATPase 483 583 - -
Mch11g0624 973 FunFam Plasma membrane ATPase 344 491 - -
Mch11g0624 973 NCBIfam HAD-IC family P-type ATPase 105 352 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch11g0624 973 NCBIfam HAD-IC family P-type ATPase 591 700 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch11g0624 973 Pfam haloacid dehalogenase-like hydrolase 328 624 - -
Mch11g0624 973 SFLD p-type atpase 314 661 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0624 Mch-Chr11:4012489 Mch8g2640 Mch-Chr8:29630087 0 dispersed
Mch11g0624 Mch-Chr11:4012489 Mch8g0384 Mch-Chr8:2734768 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0624 K01535 - csv:101219224 1643.25