Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0625 ATGGACAGATGGGAAGAGAAGAAGCTGATGGGGGGACCTCCGTTTGGCTCCTCCCCCAAATTATATAACCTCCAACAATCATTACATTTTCCAAACAGTGATCTCACCAAAAAAATGAACTCCCAAAATTCCCCTTTTCTTCTTCTTCTTCTTCTTCTTCTCTCAAGTTCTTCTTTTGCTAAGCTTCACTTCAACTTTTACCAAAACTCATGTCCCAATGTTGAGTCCATAGTTAGAGGGGCTGTGAAGCAGAAATTTGAGCAGACTTTTGTGACTGCCCCTGCCACTTTAAGGCTCTTCTTCCATGATTGTTTTGTTAGAGGGTGTGATGCTTCTGTGTTGCTGCATTCTAATAACCACACTTCCGAGAAGGATAATGCCGATAATCTATCGCTCGCCGGGGATGGGTTCGACACCGTGATCAAAGCTAAGGCTGCTGTTGATGGCGTGCCGGGGTGTAAGAACAAGGTGTCATGTGCTGATATCTTGGCTTTGGCTACTAGAGATGTTGTAGTTTTGACGGGAGGGCCGAATTACGCGGTGGAGTTGGGGAGGCGAGACGGGCGGATCTCGACACGGAAGAGCGTTCGACACCATCTTCCCCAACCCGATTTTAAATTGGATCAACTAAATGCCATGTTTAAGAAACACGGTCTTACTCAAACAGACATGATTGCTCTCTCAGGAGCACATACAATTGGATTCTCACACTGCAAACACTTCACCAACAGACTATACAACTTCCACAGCAAAAACAGGATCGATCCGACGTTCAATTCTGGATACGTGAACGAACTGAAGAAGGAATGCCCGAGAAACGTAGATGAGAGAATCGCGGTGGATATGGACTCGACATCGTCGTTCACATTCGACAACGTGTACTTCAAGAACCTGCAGATGGGGAAAGGGCTGTTCACCTCAGACCAAGTGTTGTTCAGTGATCCAAGGTCAAGAAAAACTGTGAACCAATTTGCTTCCAACAACTCAGCTTTTGAGGAGGCGTTTGTGATTGCCATGACAAAGCTTGGGAGAGTAGGGGTAAAAACTAGAAACCAAGGAGAGATCAGAAATGACTGTTCTTCAATCAACTAA 1092 45.42 MDRWEEKKLMGGPPFGSSPKLYNLQQSLHFPNSDLTKKMNSQNSPFLLLLLLLLSSSSFAKLHFNFYQNSCPNVESIVRGAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLLHSNNHTSEKDNADNLSLAGDGFDTVIKAKAAVDGVPGCKNKVSCADILALATRDVVVLTGGPNYAVELGRRDGRISTRKSVRHHLPQPDFKLDQLNAMFKKHGLTQTDMIALSGAHTIGFSHCKHFTNRLYNFHSKNRIDPTFNSGYVNELKKECPRNVDERIAVDMDSTSSFTFDNVYFKNLQMGKGLFTSDQVLFSDPRSRKTVNQFASNNSAFEEAFVIAMTKLGRVGVKTRNQGEIRNDCSSIN 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4018474 4020509 - MC11g0519 Mch11g0625 679559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0625 363 ProSiteProfiles Plant heme peroxidase family profile. 61 363 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 FunFam Peroxidase 65 216 - -
Mch11g0625 363 Pfam Peroxidase 78 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PANTHER - 49 363 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 337 350 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 281 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 135 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 156 166 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Plant peroxidase signature 297 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Haem peroxidase superfamily signature 283 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Haem peroxidase superfamily signature 175 187 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Haem peroxidase superfamily signature 157 174 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 FunFam Peroxidase 201 342 - -
Mch11g0625 363 SUPERFAMILY Heme-dependent peroxidases 62 363 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch11g0625 363 Gene3D - 65 363 - -
Mch11g0625 363 CDD secretory_peroxidase 61 362 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch11g0625 363 Gene3D Peroxidase, domain 2 201 342 - -
Mch11g0625 363 ProSitePatterns Peroxidases active site signature. 93 104 IPR019794 GO:0004601(InterPro)
Mch11g0625 363 ProSitePatterns Peroxidases proximal heme-ligand signature. 223 233 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0625 Mch-Chr11:4018474 Mch2g1334 Mch-Chr2:9447582 1.65E-141 dispersed
Mch11g0625 Mch-Chr11:4018474 Mch1g1272 Mch-Chr1:14928910 5.46E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0625 K00430 - csv:101218982 565.459