Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0630 | ATGGCGGTCGATTTGATGAGTTTTCCAAAGATGGATGACCAGATGGCCATACAGGAAGCGGCATCGCAAGGATTGAAGAGTATGGAGCATCTGATTCGTCTTCTTTCTCACAAGCAATCTTCAAATCACGTCGATTGCTCTGACCTAACGGACGCCACCGTTTCGAAGTTCAAGAAGGTGATCTCCCTCCTCAATCGGACCGGCCACGCCCGCTTCCGGCGAGGTCCGGTTTCTTCTACCTCTTCTTCATCCTCCGGTTCATCTGCTCATCTATCTGTACCTCAAAATCACGCGATGAATCTCACTCCCACTCCGTTTACTTCTCCGACAACTGTGCCTCCTGCGCCGTTCGCAGCTCCGGCGACCATCGCTCAGCCGCAGGCGAAAGTTGCTGCGGCGGCGAACTTCATCCAGCCCCAGCATCAGAGTATGACTCTCGATTTCACGAGGCCGAATATTTTGAACTCTAATCCTAAGGGAACGGAGTTGGAATTTTCCAAGGAGACATTCAGTGTCTCGTCGAGCTCTTCGTTTATGTCCTCTGCCATCACCGGAGACGGCAGCGTGTCCAACGGAAAGTTAGGAACGTCGATCTTCCTGGCACCGGCGCCGACTGCCTCCGGAGGAAAGCCTCCTCTATCGGCGGCTCCGTACAAGAAGAGGTGTCACGAACACGATCACTCTGAAGACATGTCCGGAAAATTCTCCGGCTCTTCCTCTGCCTCCGGCAAGTGCCATTGCTCCAAGAGAAGGAAAAATCGGATGAAGAAGACGATCCGAGTCCCGGCGATTAGTTCAAAAATCGCCGATATTCCACCGGACGAGTATTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCTCCATACCCACGGGGATATTACAAGTGTAGCACGATGAGGGGATGTCCGGCGAGGAAACACGTGGAGAGAGATCCGAACGATCCGGCGATGCTGATCGTAACGTACGAAGGGGAGCACCGCCACACGCCGAGCGCGTTGCCGGAGAATATGGCCGCCGGAGTAGCTTTAGTTTTTGAGTCAACTTGA | 1053 | 53.66 | MAVDLMSFPKMDDQMAIQEAASQGLKSMEHLIRLLSHKQSSNHVDCSDLTDATVSKFKKVISLLNRTGHARFRRGPVSSTSSSSSGSSAHLSVPQNHAMNLTPTPFTSPTTVPPAPFAAPATIAQPQAKVAAAANFIQPQHQSMTLDFTRPNILNSNPKGTELEFSKETFSVSSSSSFMSSAITGDGSVSNGKLGTSIFLAPAPTASGGKPPLSAAPYKKRCHEHDHSEDMSGKFSGSSSASGKCHCSKRRKNRMKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERDPNDPAMLIVTYEGEHRHTPSALPENMAAGVALVFEST | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4053570 | 4055956 | - | MC11g0524 | Mch11g0630 | 679564 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0630 | 350 | MobiDBLite | consensus disorder prediction | 226 | 252 | - | - | |
Mch11g0630 | 350 | ProSiteProfiles | WRKY domain profile. | 267 | 333 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch11g0630 | 350 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 16 | 332 | IPR044810 | GO:0003700(InterPro) | |
Mch11g0630 | 350 | MobiDBLite | consensus disorder prediction | 74 | 106 | - | - | |
Mch11g0630 | 350 | Pfam | WRKY DNA -binding domain | 274 | 330 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch11g0630 | 350 | FunFam | WRKY transcription factor 65 | 256 | 333 | - | - | |
Mch11g0630 | 350 | SUPERFAMILY | WRKY DNA-binding domain | 270 | 331 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch11g0630 | 350 | MobiDBLite | consensus disorder prediction | 72 | 113 | - | - | |
Mch11g0630 | 350 | Pfam | Plant zinc cluster domain | 219 | 270 | IPR018872 | - | |
Mch11g0630 | 350 | SMART | WRKY_cls | 272 | 332 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch11g0630 | 350 | Gene3D | WRKY domain | 242 | 333 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0630 | Mch-Chr11:4053570 | Mch6g0480 | Mch-Chr6:3169097 | 2.13E-92 | dispersed | |
Mch11g0630 | Mch-Chr11:4053570 | Mch11g0325 | Mch-Chr11:2005560 | 2.22E-70 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42587 | PF03106 | WRKY | 6.70E-26 | CL0274 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0630 | - | - | - | 0.0 |