Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0638 ATGTGGTTACCAAAATCGAGCCTAGAAAGAAAGGAGAAATTGAATGTGAATGGATTGGTGGCAGTGGCAATTGACAAAGACAAAGGAAGCCAAGGCGCTCTCAAATGGGCAATTGATCATTTGCTTCAAAAAGGACAGACTCTTTTCCTCATCCATGTCAAACCAAGATCCTCTTCTAACTCTTCCCAAAAGCCGAATTATAAATCTGACGCTGATGCTAACATCAAAGAACTATTCCTCCCTTTTCGTTGCTTTTGTACCCGAAAGGATATACAATGCAAAGATATTGTGTTGGAAGATGTAGATGTAGCCAAGGCCTTAATCGAATATGTGGCTAATACAACCATAGAGAATATTGTTGTTGGTGCTTCAGCAAAAACTGGCTTCCTAAGGTTCAAGGCAACTGATGTTCCAGGGAATGTAGTAAAAGGGGCACCAGATTTTTGCAATGTGTTCGTCATTTCTAAAGGGAAAATCCAATCCATGCGTTCGGCGTCTCGGCCTGCTCCGACGATAAGTCCTCTCAGAGGTCAATTAGCGCAACAATGCAGCGCCAAATCTGATGCAACCGAATTCCATTCTGCAACTGGAACTGCTGCAAGAGTTTCCATCGAAAAGCCACCCGTTGGCCTTGATTTTCCCTCTAAACCACCGCAGGACGAGCTCGATTTCATGAAGTCGCCATTCACCAGGAAAGGATACAATTACAAGGCATCGTATGGAGACTTGTCGATGCATGATTCGGATATATCGTTTGTTAGCTCGGGAAGGCCGAGTATTGATCGCATATTTCCTTCACTTTATGACAATCAAGATGTAGGGAGAGTTACCCCACGGATGTCGAGCAGTACAGATCTTGACTTGACTCACAGCTTCGAGTCGCTGCATATGGGACGGATGTCGCTCGATATGAGCTGTCCCTCCGAGTTCTCTTCCATCTCGCAAGATAGTGACAGACTCTCAATCTCATCACAGGCTATGGAAGATGTTGAGGCCGAGATGCGGCGGCTGAAGCTTGAACTGAAGCAGACCATGGAAATGTACAGTACAGCCTGCAAGGAAGCGCTTACAGCAAAACAAAAGGCAGTTGAGCTACAGCGCTGGAAATTAGAAGAAGAGCGGAGATTAGAAGAGGCGAGATTAGCCGGGGAAGCTGCATTGGCACTAGCAGAACAGGAGAAGGCGAAGTCGAAAGCAGCCATCGAAGCTGCTGAAGCAGCTAGGAGGATTGCGGAATTGGAAGCACAGAAGAGAATGAAGGCTGAAATGAGAGCACTAAAAGAAGCTGAAGAGAAGAAAAAGGCAGTTGATGCATTGTCACAAAATGATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGCGGCAACGGAGTTCTTTTCCGAATCCCGCAAGATCGGAGAAGGAGGTTATGGGCCTGTATATAAGTGTGATCTCGATCATACTCCTGTTGCGATTAAGGTTCTACGTCCTGATGCAACTCAAGGACGGTCACAGTTTAAACAAGAGGTAGAAGTTCTTAGCTGCATTCGGCATCCGAACATGGTTCTCCTCCTTGGAGCTTGCCCTGAGTATGGCTGCTTGGTGTATGAGTTCATGGCGAATGGTAGCTTAGAGGACCGACTTGCGCGACGAGGAAACACGCCTCCTCTTTCATGGCAGCTGAGGTTTAAAATTGCAGCTGAAATTGGAACGGCATTGTTGTTCCTACACCAGACAAAGCCAGAGCCTCTTGTGCACCGCGATCTCAAACCCGCCAACATCTTGCTTGACCGTAACTTCGTGAGCAAGATCAGTGATGTTGGCTTGGCCAGGCTTGTACCTCCATCAGTTGCCGATAACGTAACGCAATATCGAATGACATCAACTGCTGGAACATTTTGCTACATCGACCCCGAGTATCAACAGACGGGTATGCTCGGTGTGAAATCTGACATATACTCCCTAGGTATCATGTTTCTCCAACTGATAACTTCCAGGCCCCCAATGGGTTTGACTCACCATGTCGAAAGAGCTATTGAGAAGGGGACGTTCGCGAGTATTCTCGATCCAACCGTCTCCGATTGGCCTGTCGAAGAAGCTCTGTCTTTCGCCAAGATGTCACTCAAGTGTGCTGAGTTAAGACGTAAAGATAGGCCCGATCTCGGGAAGGCCATCCTGCCAGAGCTTAACAGGTTGAGAACCATTGCAGAAGACACAATGCATCCAACACTGATGGGAGGAGACACAAGTCCCTCCCGTAGCCACAGCCAAGTTTCTCTACAGTTGGGGTCAATGACTTCGTCCCATCAATCATTCTATAGCTCGAAAAATCATTCTGTTACTTGA 2331 46.89 MWLPKSSLERKEKLNVNGLVAVAIDKDKGSQGALKWAIDHLLQKGQTLFLIHVKPRSSSNSSQKPNYKSDADANIKELFLPFRCFCTRKDIQCKDIVLEDVDVAKALIEYVANTTIENIVVGASAKTGFLRFKATDVPGNVVKGAPDFCNVFVISKGKIQSMRSASRPAPTISPLRGQLAQQCSAKSDATEFHSATGTAARVSIEKPPVGLDFPSKPPQDELDFMKSPFTRKGYNYKASYGDLSMHDSDISFVSSGRPSIDRIFPSLYDNQDVGRVTPRMSSSTDLDLTHSFESLHMGRMSLDMSCPSEFSSISQDSDRLSISSQAMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEERRLEEARLAGEAALALAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAEMRALKEAEEKKKAVDALSQNDIRYRKYTIEEIEAATEFFSESRKIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLARRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIEKGTFASILDPTVSDWPVEEALSFAKMSLKCAELRRKDRPDLGKAILPELNRLRTIAEDTMHPTLMGGDTSPSRSHSQVSLQLGSMTSSHQSFYSSKNHSVT 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4126323 4131347 - MC11g_new0108 Mch11g0638 679572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0638 776 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 154 - -
Mch11g0638 776 Coils Coil 320 347 - -
Mch11g0638 776 Gene3D HUPs 19 154 IPR014729 -
Mch11g0638 776 PANTHER OS02G0152300 PROTEIN 20 760 IPR051348 -
Mch11g0638 776 MobiDBLite consensus disorder prediction 740 776 - -
Mch11g0638 776 ProSiteProfiles Protein kinase domain profile. 461 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0638 776 Coils Coil 387 439 - -
Mch11g0638 776 Gene3D Phosphorylase Kinase; domain 1 438 533 - -
Mch11g0638 776 Gene3D Transferase(Phosphotransferase) domain 1 534 738 - -
Mch11g0638 776 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 433 533 - -
Mch11g0638 776 Pfam Universal stress protein family 20 146 IPR006016 -
Mch11g0638 776 MobiDBLite consensus disorder prediction 736 776 - -
Mch11g0638 776 SUPERFAMILY Protein kinase-like (PK-like) 443 718 IPR011009 -
Mch11g0638 776 Coils Coil 353 373 - -
Mch11g0638 776 Pfam Protein kinase domain 462 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0638 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0638 776 CDD STK_N 19 157 - -
Mch11g0638 776 SMART serkin_6 461 721 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0638 776 FunFam U-box domain-containing protein 51 534 734 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0638 Mch-Chr11:4126323 Mch8g0558 Mch-Chr8:4007667 2.14E-249 dispersed
Mch4g0531 Mch-Chr4:3353644 Mch11g0638 Mch-Chr11:4126323 6.07E-287 transposed
Mch5g1886 Mch-Chr5:18955860 Mch11g0638 Mch-Chr11:4126323 3.42E-10 transposed
Mch8g2590 Mch-Chr8:29058551 Mch11g0638 Mch-Chr11:4126323 5.92E-280 transposed
Mch11g0638 Mch-Chr11:4126323 Mch8g0371 Mch-Chr8:2645048 1.79E-177 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77057 PF00069 Pkinase 3.00E-40 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0638 - - - 0.0