Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0645 | GATTCAAAAAAGTCCAACAAAATCAGAGAAATCGTTAGGCTTCAACAGATCATCAAGAAATGGCGAAAAATGGCAAACTCCTCGAAATCGGCAAGCAAAATCTCCGGCACGGCTCCGGCCTCCGCCTCCGCCGGGAAGAGCATGAAGTTTCTGAAACGAACGGTCTCCGCCGGGCGGGAGGGATCCGGCGCCGCCGTGCCGAAAGGCTATTTGGCGGTGAGCGTCGGCGAGGAGCAGAAGCGATTCGTGATTCCGACTCAGTATTTAGGGCATCCGGCGTTTGAGATTCTGCTGCGGGAGGCGGAGGAGGAGTTCGGATTTCAGCAGACGGGCGTATTGAGGCTGCCGTGTGAGGTTTCGATTTTCGAGAATGTTCTGAAAGTTGTGGAGAAGAAGAATGGCGATTTGTTTGGCGGAGACGATTTTTTGAGCTATTGTTCGTTGGAAAGCCTGCAGCTTACGCCGTCGCACCGCCCGCAGAGCCCAATGTGCAGA | 495 | 54.14 | DSKKSNKIREIVRLQQIIKKWRKMANSSKSASKISGTAPASASAGKSMKFLKRTVSAGREGSGAAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVSIFENVLKVVEKKNGDLFGGDDFLSYCSLESLQLTPSHRPQSPMCR | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4175995 | 4176489 | - | MC11g0537 | Mch11g0645 | 679579 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0645 | 165 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 14 | 129 | IPR003676 | GO:0009733(InterPro) | |
| Mch11g0645 | 165 | Pfam | Auxin responsive protein | 14 | 128 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0645 | Mch-Chr11:4175995 | Mch9g0139 | Mch-Chr9:1073725 | 1.72E-39 | dispersed | |
| Mch11g0645 | Mch-Chr11:4175995 | Mch11g0132 | Mch-Chr11:844736 | 2.16E-23 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0645 | K14488 | - | csv:101216710 | 246.514 |