Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0650 ATGGAACCTCGTTTTCTGCTCACATTTGCCTTCATCTCCGTTGCGTCCGTGGTTAGTCATGCCACTCTCTCGGCCGAACAATATTGGAGTTCTATGCTACCAAACACTCCGATGCCGAAATCCATCAAAGATCTCCTTAGTTCCGACTTTCTAGAAGATAAAAGTACTTCAGTGAATGTCGGAAAAGGCGGGGTTAACGTGCATGCCCCAAAAGGAAAGCCCGGCGGCACCTCCGTCGGCGTCGGCAAGGGAGGTGTCAACGTCCACACCGGTCACAAGGGGAAACCAGTGTACGTTGGAGTTAAGCCAGGCTCTAATCCCTTCGATTATATTTATGCAGCAACAGAAGACCAACTTCATGACGACCCCAACGTAGCTCTCTTCTTCTTGGAAAAAAATCTACGCCCGGCCACAAAACTCACCCTCCATTTCCCCAAAACTTCACTGCCAGAATCCACTTTTTTACCCCATCAGGTCGCCAAAAATTTACCCTTCTCGTCTCATAAACTTCCCCAAATCTTCGACCAATTCTCAGTCAAACCCACGACTTTAGAAGCCGAGTTGATCGAGAGGACGATCAAGGAATGCGAAGCACCCAATATGGTCGGAGAAGACAAGTATTGCGCTACATCGTTGGAGTCTATGGTCGACTTTAGTATTTCTAAGCTGGGAAATAAGGTGACGGCGATCTCGACACAAGTCGAGAAAGACACGAATTTGCAAGAGTTTACGGTTTCGGGTGTGGCGAAGAAATCGGTGCACGACAAAGCTGTTGTCTGCCACAAGCAAAGCTACCCATACGCTGTATTTTACTGCCACGCCACACAGCACACGCGAGCTTACAAGGTTAGTTTGGTCGGTGCTGACGGGACGAGAGTTGATGCCGTGGCAGTTTGTCACACCGACACGTCGGCTTGGAACCCGAAGCATTTGGCTTTCCAAGTTCTGAAGGTGAAGCCCGGAACCGTCCCTGTTTGCCACTTCCTCCCACAAGACCATGTCGTGTGGGTCTCAAATTAG 1020 49.61 MEPRFLLTFAFISVASVVSHATLSAEQYWSSMLPNTPMPKSIKDLLSSDFLEDKSTSVNVGKGGVNVHAPKGKPGGTSVGVGKGGVNVHTGHKGKPVYVGVKPGSNPFDYIYAATEDQLHDDPNVALFFLEKNLRPATKLTLHFPKTSLPESTFLPHQVAKNLPFSSHKLPQIFDQFSVKPTTLEAELIERTIKECEAPNMVGEDKYCATSLESMVDFSISKLGNKVTAISTQVEKDTNLQEFTVSGVAKKSVHDKAVVCHKQSYPYAVFYCHATQHTRAYKVSLVGADGTRVDAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPVCHFLPQDHVVWVSN 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4238290 4240433 - MC11g0542 Mch11g0650 679584

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0650 339 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 14 339 IPR044816 -
Mch11g0650 339 SMART BURP_2 126 339 IPR004873 -
Mch11g0650 339 ProSiteProfiles BURP domain profile. 128 339 IPR004873 -
Mch11g0650 339 MobiDBLite consensus disorder prediction 61 81 - -
Mch11g0650 339 Pfam BURP domain 127 337 IPR004873 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0650 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0650 Mch-Chr11:4238290 Mch1g1865 Mch-Chr1:18715444 2.05E-51 dispersed
Mch11g0650 Mch-Chr11:4238290 Mch4g0602 Mch-Chr4:3979144 2.05E-55 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g340 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed05g1616 . . . . . . . . Bhi09g02410 Tan01g3770 Cmetu04g1481 . Hepe01g2112 Mch11g0650 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010252 2 1 0 2 1 1 1 0 1 0 1 1 0 1 1 1 1 2 1 1 0 1 1 1 1 1 1 1 1 4 31