Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0659 ATGGCGGATTCCGGCGGAGGCAAGTGGAGGAGCAAACGGCCGCTGTTGATCGCGACGGTCAATTTTCTGTTAGCTCTGGCTGTAGTTTCTGCAGAAAGAAGCTTGAAGATGCCGGAAATGTCATCGTCGGACGAAACACGGAGAAGTTCCGCCGATGATCGGCGAGATTTCAAAAGTCTCCTCGCCGCCGCGAAGACCTTTCTCCGGCGAGCGGACGGTGCCGATAATCAACTCGTATGGCCAGATATGGAGTTTGGGTGGCGCATTGTGGCCGGCACGGCGGTTGGATTTATGGGAGGGGCTTTCGGCAGCGTCGGCGGTCTTGGCGGCGGCGCCTTTTTCCTTCCGATGCTTAATCTCATTATTGGGTTCGATCCCAAATCCTCCACCGCCATTTCCAAATGTATGATAATGGGTGCAGCGGTATCGACGGTGTATTATAATCTTAAACTAAGGCATCCGGCTCTCGACATGCCCATTATTGACTATGATTTGGTGCTTCTTGTCCAGCCCATGCTCATGCTTGGAATTAGCATTGGAGTTATTTTTAATGTCATTTTAGCCGATTGGATGGTCACAATTCTCCTCCTCATCCTCTTTTTATTCATATCTACAAAAGCATTTCTGAAGGGAGTTGCAGCTTGGAAGAAGGAAACGCTTCTTCTCAAAATGGAGGCTGACAAGCTCTTCGGTGAGTCACATGCCTCTGAAAGTGAAGGGATCGAGTACAGGGCTCTTCCTGGTGGACCTGGACAGGAGACAAAGGAAATAGAGGCAGAAGTAGAAATGTCAATTCTTCAGAATGTGTGTTGGAAGGAATTGGGTCTTCTCTTCTTCGTTTGGGTTGCCTTCCTTGTCCTCCAGATTCTCAAGGAGAAAACAATGTCTTGCTCGTGGAAATATTGGCTACTAAACTTACTGCAGATCCCAGTATCTGTGGGGGTGTGTTCGTACGAGGCAATTAACCTGTACAAGGGTAGGAGAGTAATTTCATCCTTGGGAGATCGTCGGACCGAATTCCGCGTCGGGCAGCTTCTGGCGTACGGCACCCTTGGCGTGGCGGCCGGCACCGTCGCCGGATTGCTCGGCGTCGGCGGAGGATCCATCATGGGACCATTGTTTTTGGAGCTCGGAGTTCCTCCTCAGGTGGCAAGTGCCTCGGCAACCTTCGCGATGATGTTTTCATCATCAATGTCAGTTGTGGAATACTACCTTCTCGATCAATTTCCAGTGTCATATGCTGTTTATTTTGCGGCGGTGGCGACGGTTGCGGCCTATTGTGGACAGCATGTTGTGAGGGAAATTATTGCTTTGCTTGGAAGGGCTTCAATTATTATCTTCGTTCTCTCCTTCACACTCTTCTTTTTTTCCCTCACACAAGGTGGAGTGGGTATATCAGATGCGATCCAACGGATTCAGCGAAATGAATACATGGGATTTCAGAATTTGTGTCGAAGCAGTGGAGGGTTGTGTAAACGCAATCGAAGCACAATGGTTTTCTATTTCAAAGCCCGCCCCGACGTTGGCGATTACACCATTTTCATGGGTCTCGACAAGTACGAGAACGAGGAGCTCATCAAATACGGCTTCCCCGAGGATATTTGGTTCCACGTGGACAAAATGTCGTCTGCCCATGTTTATGTGAGACTGCAAAAAGGTCAGACCATTGATGATATAAGTGAAGGGTTGCTGGAGGATTGTGCTCAGCTTGTCAAAGCAAATTCCATTCAAGGAAACAAGGTAAACAACATTGATGTTGTTTATACGCCTTGGTCCAATTTGAAGAAAACTGCTTCCATGGATGTTGGTCAAGTTGGTTTTCATAACCCCAAGATGGTCCGAACTGTAAGGGTTGAAAAACGGATCAATGACATTGTCAATAGATTGAACAGGACTAAAGTGGAAAGAAAGCCTGATTTGAAAGCCGAACGTGAAGCAGTGAATGCAGCTGAAAGAGCTGAGAGAAAGCAACACCTGAGAGAAAAGAAGCGGCGCGAGGAACTGGATAGGTTAGAAAAAGAGAGGCAAGCGGAGCTAAGGAGCTACAAGGGTTTGATGGTGTCGGAGAAGATGACATCTAACAAACAGATTGCAGCAACAAGCAAATCACTACAAGAGCTGGAGGACGATTTCATGTGA 2139 47.97 MADSGGGKWRSKRPLLIATVNFLLALAVVSAERSLKMPEMSSSDETRRSSADDRRDFKSLLAAAKTFLRRADGADNQLVWPDMEFGWRIVAGTAVGFMGGAFGSVGGLGGGAFFLPMLNLIIGFDPKSSTAISKCMIMGAAVSTVYYNLKLRHPALDMPIIDYDLVLLVQPMLMLGISIGVIFNVILADWMVTILLLILFLFISTKAFLKGVAAWKKETLLLKMEADKLFGESHASESEGIEYRALPGGPGQETKEIEAEVEMSILQNVCWKELGLLFFVWVAFLVLQILKEKTMSCSWKYWLLNLLQIPVSVGVCSYEAINLYKGRRVISSLGDRRTEFRVGQLLAYGTLGVAAGTVAGLLGVGGGSIMGPLFLELGVPPQVASASATFAMMFSSSMSVVEYYLLDQFPVSYAVYFAAVATVAAYCGQHVVREIIALLGRASIIIFVLSFTLFFFSLTQGGVGISDAIQRIQRNEYMGFQNLCRSSGGLCKRNRSTMVFYFKARPDVGDYTIFMGLDKYENEELIKYGFPEDIWFHVDKMSSAHVYVRLQKGQTIDDISEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVRVEKRINDIVNRLNRTKVERKPDLKAEREAVNAAERAERKQHLREKKRREELDRLEKERQAELRSYKGLMVSEKMTSNKQIAATSKSLQELEDDFM 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4290843 4301131 + MC11g0550 Mch11g0659 679593

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0659 712 PANTHER CEREBLON 47 484 - GO:0016567(PANTHER)|GO:0031464(PANTHER)
Mch11g0659 712 Coils Coil 656 681 - -
Mch11g0659 712 MobiDBLite consensus disorder prediction 692 712 - -
Mch11g0659 712 Pfam NFACT protein RNA binding domain 498 609 IPR008532 -
Mch11g0659 712 MobiDBLite consensus disorder prediction 640 673 - -
Mch11g0659 712 Pfam Sulfite exporter TauE/SafE 351 456 IPR002781 GO:0016020(InterPro)
Mch11g0659 712 Pfam Sulfite exporter TauE/SafE 60 205 IPR002781 GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0659 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0659 Mch-Chr11:4290843 Mch1g0890 Mch-Chr1:12239262 1.86E-121 dispersed
Mch11g0658 Mch-Chr11:4282793 Mch11g0659 Mch-Chr11:4290843 2.19E-188 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g329 . Blo12g00762 . Bda03g00423 . Bpe02g00178 Bma04g00399 Bma01g02468 . . Cma01g01600 . Car09g00485 . . . Cpe06g00420 . . . . . . . . . . . . . . Cone4ag1533 Cone7ag1419 . . Lsi04g02228 Csa03g04439 Chy04g00261 . . . . . . Bpe04g00389 . . Sed05g1606 Cmo01g01647 Cmo09g00543 Cma09g00553 . Car01g01220 . . Cpe02g00378 Bhi09g02423 Tan01g3782 Cmetu04g0213 . Hepe01g2121 Mch11g0659 . . . . . . . . . . . Cme04g00292
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006906 2 1 2 2 2 1 2 1 0 1 1 1 2 1 0 2 1 2 2 0 1 1 1 0 1 1 1 2 1 1 36