Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0664 ATGGAGAAGCTGTGCTGTTTTAATGCTTCCTACTCTCGGATTAGATCCGCATCAAACTACGGTAAAGGAAGAAGCCACGAGGGGATAATCAAGTATGGATTCTGCCTGGTAAAAGGGAAAGCCAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAGAGACATGAGTTGGGGCTCTTTGCTATTTATGATGGGCATTTAGGAGAAAATGTGCCTGCCTACTTACAAAAACATTTGTTTACTAATATCCTGAATGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCAAAAGCCTACGAGAAGACAGACCAGGCAATTCTATCCCACAGCTCTGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATCTTGATTAATGGTCGACGATTATGGGTGGCTAATGTTGGAGATTCGCGTGCGGTTATTTCGAGAGGGGGCGAAGCTGTACAGATGACCATAGATCATGAGCCGAATACAGAACGTGGCATCATTGAGAATAAAGGTGGCTTTGTTTCAAACATGCCAGGAGATGTACCTCGAGTGAATGGCCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACTTGCGATCGGATCCCGACATTCGCGATATCGATATAGACGCCAACATGGACATATTGATTCTCGCAAGCGACGGTCTTTGGAAGGTCATGGCCAATCAAGAAGCTGTTGATATTGCTAGGAAAATCAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA 840 44.29 MEKLCCFNASYSRIRSASNYGKGRSHEGIIKYGFCLVKGKANHPMEDYHVAKFVQIQRHELGLFAIYDGHLGENVPAYLQKHLFTNILNEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVISRGGEAVQMTIDHEPNTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDIDIDANMDILILASDGLWKVMANQEAVDIARKIKDPLKAAKQLITEALQKESKDDISCIVVRFR 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4336020 4340051 + MC11g0555 Mch11g0664 679598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0664 279 Gene3D - 26 279 IPR036457 -
Mch11g0664 279 FunFam Probable protein phosphatase 2C 39 21 279 - -
Mch11g0664 279 SMART PP2C_SIG_2 42 278 IPR001932 -
Mch11g0664 279 CDD PP2Cc 30 278 IPR001932 -
Mch11g0664 279 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Mch11g0664 279 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Mch11g0664 279 PANTHER PROTEIN PHOSPHATASE 27 276 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch11g0664 279 SUPERFAMILY PP2C-like 26 278 IPR036457 -
Mch11g0664 279 SMART PP2C_4 23 276 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0340 Mch-Chr10:2274676 Mch11g0664 Mch-Chr11:4336020 3.34E-122 dispersed
Mch11g0664 Mch-Chr11:4336020 Mch4g0141 Mch-Chr4:940150 3.76E-105 dispersed
Mch11g0664 Mch-Chr11:4336020 Mch11g1054 Mch-Chr11:7341252 1.63E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0664 K17506 - csv:101213414 519.235