Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0664 | ATGGAGAAGCTGTGCTGTTTTAATGCTTCCTACTCTCGGATTAGATCCGCATCAAACTACGGTAAAGGAAGAAGCCACGAGGGGATAATCAAGTATGGATTCTGCCTGGTAAAAGGGAAAGCCAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAGAGACATGAGTTGGGGCTCTTTGCTATTTATGATGGGCATTTAGGAGAAAATGTGCCTGCCTACTTACAAAAACATTTGTTTACTAATATCCTGAATGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCAAAAGCCTACGAGAAGACAGACCAGGCAATTCTATCCCACAGCTCTGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATCTTGATTAATGGTCGACGATTATGGGTGGCTAATGTTGGAGATTCGCGTGCGGTTATTTCGAGAGGGGGCGAAGCTGTACAGATGACCATAGATCATGAGCCGAATACAGAACGTGGCATCATTGAGAATAAAGGTGGCTTTGTTTCAAACATGCCAGGAGATGTACCTCGAGTGAATGGCCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACTTGCGATCGGATCCCGACATTCGCGATATCGATATAGACGCCAACATGGACATATTGATTCTCGCAAGCGACGGTCTTTGGAAGGTCATGGCCAATCAAGAAGCTGTTGATATTGCTAGGAAAATCAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA | 840 | 44.29 | MEKLCCFNASYSRIRSASNYGKGRSHEGIIKYGFCLVKGKANHPMEDYHVAKFVQIQRHELGLFAIYDGHLGENVPAYLQKHLFTNILNEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVISRGGEAVQMTIDHEPNTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDIDIDANMDILILASDGLWKVMANQEAVDIARKIKDPLKAAKQLITEALQKESKDDISCIVVRFR | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4336020 | 4340051 | + | MC11g0555 | Mch11g0664 | 679598 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0664 | 279 | Gene3D | - | 26 | 279 | IPR036457 | - | |
Mch11g0664 | 279 | FunFam | Probable protein phosphatase 2C 39 | 21 | 279 | - | - | |
Mch11g0664 | 279 | SMART | PP2C_SIG_2 | 42 | 278 | IPR001932 | - | |
Mch11g0664 | 279 | CDD | PP2Cc | 30 | 278 | IPR001932 | - | |
Mch11g0664 | 279 | Pfam | Protein phosphatase 2C | 40 | 271 | IPR001932 | - | |
Mch11g0664 | 279 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 278 | IPR001932 | - | |
Mch11g0664 | 279 | PANTHER | PROTEIN PHOSPHATASE | 27 | 276 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Mch11g0664 | 279 | SUPERFAMILY | PP2C-like | 26 | 278 | IPR036457 | - | |
Mch11g0664 | 279 | SMART | PP2C_4 | 23 | 276 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0340 | Mch-Chr10:2274676 | Mch11g0664 | Mch-Chr11:4336020 | 3.34E-122 | dispersed | |
Mch11g0664 | Mch-Chr11:4336020 | Mch4g0141 | Mch-Chr4:940150 | 3.76E-105 | dispersed | |
Mch11g0664 | Mch-Chr11:4336020 | Mch11g1054 | Mch-Chr11:7341252 | 1.63E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0664 | K17506 | - | csv:101213414 | 519.235 |