Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0666 GATATGGTTGAGGAAATGAAGAAAGTTGCCAAGTTAAATGTGGAATTGACAGTGGAAGAGAGGAATCTGCTGTCTATTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCATGGCGTATTTTGTCTTCAATTGAACAGAAGGAGGGTGCCAAACATAATGAGAAGAATGTGGAACGGATAATTGGGTACAGGCGTAGGGTTGAGGATGAACTCTCTAAAATATGCAGTGACATATTATCAATTATTGATGAGCATCTCCTTCCACACTCCTCTGCCGGAGAGTCCACTGTATTCTACCATAAGATGAAAGGAGATTATTGTCGCTATTTGGCCGAGTTTAAATCTGATGATGATGAGCGTAAAAAAATTGCAGATCAGTCATTGAAGGCTTATGAGGCTGCTTCTGCTATTGCTACCTCTGATTTGCCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCCCTGAAAGGGCTTGCCACCTTGCTAAGCATGCCTTTGATGAGGCCATTGCCGAACTTGACAGTCTCAATGAAGACTCCTACAAGGACAGTACCCTTATCATGCAGCTTCTTAGGGACAATCTCACTCTGTGGACTTCAGATCTGCCTGATGAAGGAGGAGAGCAGTCCAATGCTGATGAAGTTTAG 687 42.65 DMVEEMKKVAKLNVELTVEERNLLSIGYKNVIGARRASWRILSSIEQKEGAKHNEKNVERIIGYRRRVEDELSKICSDILSIIDEHLLPHSSAGESTVFYHKMKGDYCRYLAEFKSDDDERKKIADQSLKAYEAASAIATSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKHAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEV 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4344868 4348210 - MC11g0557 Mch11g0666 679600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0666 228 PIRSF 14-3-3 1 226 IPR000308 -
Mch11g0666 228 Gene3D - 1 225 IPR036815 -
Mch11g0666 228 PANTHER 14-3-3 PROTEIN 1 217 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Mch11g0666 228 SUPERFAMILY 14-3-3 protein 3 219 IPR036815 -
Mch11g0666 228 ProSitePatterns 14-3-3 proteins signature 2. 194 213 IPR023409 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 131 157 IPR000308 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 15 44 IPR000308 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 95 117 IPR000308 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 64 88 IPR000308 -
Mch11g0666 228 PRINTS 14-3-3 protein zeta signature 185 214 IPR000308 -
Mch11g0666 228 FunFam 14-3-3 gamma 1 1 222 - -
Mch11g0666 228 Pfam 14-3-3 protein 1 212 IPR023410 -
Mch11g0666 228 SMART 1433_4 1 225 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0666 Mch-Chr11:4344868 Mch9g2079 Mch-Chr9:21845413 2.02E-119 dispersed
Mch11g0666 Mch-Chr11:4344868 Mch8g0211 Mch-Chr8:1401452 2.60E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0666 K06630 - csv:101213169 396.356