Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0676 | ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTACGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTCTCGGCCGCCATCGACAACGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTCTGTTGCCTACAAGAATGTTATTGGAGCCCGTAGAGCCTCCTGGCGGATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGGAACGACGATCATGTCTCCATCATCCGTCAATACAGATCCAAGATCGAGAACGAGCTCTCCAATATCTGTGACGGTATCCTCAAGCTTCTTGACTCTCGCCTCATTTCCTCCGCTGCTTCCGGAGATTCCAAGGTCTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTCGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAGGCTGCCGAAAGCACCCTCACCGCTTATAAATCTGCTCAGGACATTGCAAATGCTGAACTTGCTCCTACTCATCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGGGCTTGCAGCCTCGCTAAACAGGCCTTTGATGAAGCAATTGCTGAGTTGGATACATTGGGCGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCGGACATGCAGGATGATGGTGCAGATGAGATTAAAGAAGCCGCTCCCAAACGTGATGAGGAATAG | 780 | 51.41 | MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAIDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIRQYRSKIENELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKRDEE | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4418215 | 4421478 | + | MC11g0567 | Mch11g0676 | 679610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0676 | 259 | SMART | 1433_4 | 8 | 251 | IPR023410 | - | |
Mch11g0676 | 259 | PIRSF | 14-3-3 | 2 | 250 | IPR000308 | - | |
Mch11g0676 | 259 | FunFam | 14-3-3 protein epsilon | 4 | 251 | - | - | |
Mch11g0676 | 259 | Coils | Coil | 14 | 34 | - | - | |
Mch11g0676 | 259 | Gene3D | - | 1 | 251 | IPR036815 | - | |
Mch11g0676 | 259 | PANTHER | 14-3-3 PROTEIN | 8 | 243 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Mch11g0676 | 259 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Mch11g0676 | 259 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - | |
Mch11g0676 | 259 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Mch11g0676 | 259 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
Mch11g0676 | 259 | SUPERFAMILY | 14-3-3 protein | 7 | 240 | IPR036815 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0676 | Mch-Chr11:4418215 | Mch8g2395 | Mch-Chr8:27032396 | 1.29E-150 | dispersed | |
Mch11g0676 | Mch-Chr11:4418215 | Mch8g0225 | Mch-Chr8:1504843 | 3.72E-166 | wgd | |
Mch11g0676 | Mch-Chr11:4418215 | Mch8g0290 | Mch-Chr8:2009044 | 8.67E-124 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0676 | K06630 | - | csv:101210822 | 486.108 |