Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0676 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTACGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTCTCGGCCGCCATCGACAACGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTCTGTTGCCTACAAGAATGTTATTGGAGCCCGTAGAGCCTCCTGGCGGATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGGAACGACGATCATGTCTCCATCATCCGTCAATACAGATCCAAGATCGAGAACGAGCTCTCCAATATCTGTGACGGTATCCTCAAGCTTCTTGACTCTCGCCTCATTTCCTCCGCTGCTTCCGGAGATTCCAAGGTCTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTCGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAGGCTGCCGAAAGCACCCTCACCGCTTATAAATCTGCTCAGGACATTGCAAATGCTGAACTTGCTCCTACTCATCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGGGCTTGCAGCCTCGCTAAACAGGCCTTTGATGAAGCAATTGCTGAGTTGGATACATTGGGCGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCGGACATGCAGGATGATGGTGCAGATGAGATTAAAGAAGCCGCTCCCAAACGTGATGAGGAATAG 780 51.41 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAIDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIRQYRSKIENELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKRDEE 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4418215 4421478 + MC11g0567 Mch11g0676 679610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0676 259 SMART 1433_4 8 251 IPR023410 -
Mch11g0676 259 PIRSF 14-3-3 2 250 IPR000308 -
Mch11g0676 259 FunFam 14-3-3 protein epsilon 4 251 - -
Mch11g0676 259 Coils Coil 14 34 - -
Mch11g0676 259 Gene3D - 1 251 IPR036815 -
Mch11g0676 259 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Mch11g0676 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Mch11g0676 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Mch11g0676 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Mch11g0676 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0676 Mch-Chr11:4418215 Mch8g2395 Mch-Chr8:27032396 1.29E-150 dispersed
Mch11g0676 Mch-Chr11:4418215 Mch8g0225 Mch-Chr8:1504843 3.72E-166 wgd
Mch11g0676 Mch-Chr11:4418215 Mch8g0290 Mch-Chr8:2009044 8.67E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0676 K06630 - csv:101210822 486.108