Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0676 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTACGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTCTCGGCCGCCATCGACAACGAGGAGCTCACCGTCGAGGAGCGCAACCTCCTCTCTGTTGCCTACAAGAATGTTATTGGAGCCCGTAGAGCCTCCTGGCGGATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGGAACGACGATCATGTCTCCATCATCCGTCAATACAGATCCAAGATCGAGAACGAGCTCTCCAATATCTGTGACGGTATCCTCAAGCTTCTTGACTCTCGCCTCATTTCCTCCGCTGCTTCCGGAGATTCCAAGGTCTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTCGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAGGCTGCCGAAAGCACCCTCACCGCTTATAAATCTGCTCAGGACATTGCAAATGCTGAACTTGCTCCTACTCATCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGGGCTTGCAGCCTCGCTAAACAGGCCTTTGATGAAGCAATTGCTGAGTTGGATACATTGGGCGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCGGACATGCAGGATGATGGTGCAGATGAGATTAAAGAAGCCGCTCCCAAACGTGATGAGGAATAG 780 51.41 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAIDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIRQYRSKIENELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKRDEE 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4418215 4421478 + MC11g0567 Mch11g0676 679610

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0676 259 SMART 1433_4 8 251 IPR023410 -
Mch11g0676 259 PIRSF 14-3-3 2 250 IPR000308 -
Mch11g0676 259 FunFam 14-3-3 protein epsilon 4 251 - -
Mch11g0676 259 Coils Coil 14 34 - -
Mch11g0676 259 Gene3D - 1 251 IPR036815 -
Mch11g0676 259 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Mch11g0676 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Mch11g0676 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Mch11g0676 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Mch11g0676 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Mch11g0676 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0676 K06630 - - csv:101210822 486.108
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0676 Mch-Chr11:4418215 Mch8g2395 Mch-Chr8:27032396 1.29E-150 dispersed
Mch11g0676 Mch-Chr11:4418215 Mch8g0225 Mch-Chr8:1504843 3.72E-166 wgd
Mch11g0676 Mch-Chr11:4418215 Mch8g0290 Mch-Chr8:2009044 8.67E-124 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g442 . . Bda01g00893 Bda03g00486 . Bpe04g00439 . . Cmo05g00534 Cmo12g00129 Cma01g01616 Cma09g00568 Car01g01232 Car12g00154 Sed04g0158 Cpe06g00431 Cpe07g00142 Bhi04g00777 Tan02g2410 Cmetu03g2141 . Hepe10g0481 . Lcy13g1545 Cla08g01123 Cam08g1580 Cec08g1150 Cco08g1276 Clacu08g1281 . Cre08g1063 . . . . Lsi04g02246 Csa03g04457 Chy04g00245 Cme03g01852 Blo17g00112 Blo18g00127 . Bda13g01393 Bpe02g01128 Bpe14g00462 Bma01g01396 Bma02g00132 Sed05g1594 Cmo01g01661 Cmo09g00555 Cma12g00167 Cma05g00507 Car05g00457 Car09g00495 Cpe11g00447 Cpe02g00365 Bhi09g02451 Tan01g3801 Cmetu04g2791 . Hepe01g2137 Mch11g0676 . Cla11g01392 Cam11g1448 Cec11g1476 Cco11g1473 Clacu11g1607 Cmu11g1426 Cre11g1846 Lsi08g00980 Csa02g02163 Chy03g01354 Cme04g00274
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch8g0225 . 4 242 14-3-3 family AT4G09000 91.2 1.2e-119 426.4
Mch11g0676 . 5 242 14-3-3 family AT4G09000 89.9 6.8e-118 420.6
Mch8g2395 . 6 241 14-3-3 family AT4G09000 86.4 5.6e-112 401.0
Mch8g0290 . 124 360 14-3-3 family AT4G09000 75.1 9.2e-99 357.1
Mch8g0211 . 57 294 14-3-3 family AT4G09000 69.2 1.2e-90 330.1
Mch9g2079 . 46 282 14-3-3 family AT4G09000 71.5 7.8e-90 327.4
Mch8g0138 . 4 263 14-3-3 family AT4G09000 64.9 2.0e-85 312.8
Mch11g0666 . 1 215 14-3-3 family AT4G09000 70.0 2.0e-77 286.2
Mch11g0676 . 5 259 14-3-3 family AT1G78300 91.4 4.2e-126 447.6
Mch8g0225 . 8 262 14-3-3 family AT1G78300 91.0 2.1e-125 445.3
Mch8g2395 . 6 253 14-3-3 family AT1G78300 87.5 9.4e-118 419.9
Mch8g0290 . 125 361 14-3-3 family AT1G78300 76.4 2.3e-100 362.1
Mch8g0211 . 59 303 14-3-3 family AT1G78300 68.8 8.9e-92 333.6
Mch9g2079 . 50 298 14-3-3 family AT1G78300 69.7 2.2e-90 328.9
Mch8g0138 . 8 281 14-3-3 family AT1G78300 63.8 1.1e-86 316.6
Mch11g0666 . 1 222 14-3-3 family AT1G78300 66.1 8.1e-77 283.9
Mch8g2395 . 6 259 14-3-3 family AT5G38480 89.4 3.3e-123 438.0
Mch8g0225 . 6 252 14-3-3 family AT5G38480 85.4 1.6e-114 409.1
Mch11g0676 . 6 253 14-3-3 family AT5G38480 85.5 3.1e-113 404.8
Mch8g0290 . 124 365 14-3-3 family AT5G38480 74.8 3.7e-98 354.8
Mch8g0211 . 63 307 14-3-3 family AT5G38480 72.5 3.2e-94 341.7
Mch9g2079 . 50 298 14-3-3 family AT5G38480 72.1 6.7e-92 334.0
Mch8g0138 . 8 279 14-3-3 family AT5G38480 65.3 2.2e-87 318.9
Mch11g0666 . 1 227 14-3-3 family AT5G38480 68.6 3.8e-79 291.6
Mch8g0225 . 3 242 14-3-3 family AT1G35160 90.4 2.6e-119 425.2
Mch11g0676 . 4 242 14-3-3 family AT1G35160 89.5 6.3e-118 420.6
Mch8g2395 . 6 240 14-3-3 family AT1G35160 86.4 6.7e-112 400.6
Mch8g0290 . 115 360 14-3-3 family AT1G35160 74.0 5.0e-99 357.8
Mch8g0211 . 56 294 14-3-3 family AT1G35160 69.7 4.5e-92 334.7
Mch9g2079 . 41 282 14-3-3 family AT1G35160 71.3 7.3e-90 327.4
Mch8g0138 . 8 263 14-3-3 family AT1G35160 65.5 3.2e-85 312.0
Mch11g0666 . 1 215 14-3-3 family AT1G35160 69.6 1.9e-77 286.2
Mch8g2395 . 5 254 14-3-3 family AT5G16050 84.8 7.0e-116 413.7
Mch8g0225 . 3 253 14-3-3 family AT5G16050 78.9 1.4e-108 389.4
Mch11g0676 . 4 252 14-3-3 family AT5G16050 79.1 2.3e-106 382.1
Mch8g0290 . 124 362 14-3-3 family AT5G16050 71.5 2.9e-93 338.6
Mch8g0211 . 60 303 14-3-3 family AT5G16050 65.4 8.3e-85 310.5
Mch9g2079 . 45 289 14-3-3 family AT5G16050 64.4 6.0e-83 304.3
Mch8g0138 . 3 287 14-3-3 family AT5G16050 57.8 1.1e-79 293.5
Mch11g0666 . 15 221 14-3-3 family AT5G16050 70.5 4.9e-77 284.6
Mch8g0290 . 123 360 14-3-3 family AT5G10450 87.4 3.0e-114 408.3
Mch8g0225 . 3 251 14-3-3 family AT5G10450 77.2 5.7e-105 377.5
Mch11g0676 . 1 251 14-3-3 family AT5G10450 76.6 2.8e-104 375.2
Mch8g2395 . 7 259 14-3-3 family AT5G10450 74.0 1.8e-103 372.5
Mch8g0211 . 63 294 14-3-3 family AT5G10450 67.2 1.3e-85 313.2
Mch9g2079 . 45 282 14-3-3 family AT5G10450 66.0 2.1e-83 305.8
Mch8g0138 . 3 263 14-3-3 family AT5G10450 59.1 7.7e-78 287.3
Mch11g0666 . 15 215 14-3-3 family AT5G10450 68.2 1.5e-73 273.1
Mch8g2395 . 4 261 14-3-3 family AT3G02520 90.0 5.1e-127 450.7
Mch8g0225 . 6 252 14-3-3 family AT3G02520 86.7 9.6e-118 419.9
Mch11g0676 . 5 259 14-3-3 family AT3G02520 85.2 3.7e-117 417.9
Mch8g0290 . 124 362 14-3-3 family AT3G02520 76.2 1.1e-100 363.2
Mch8g0211 . 59 299 14-3-3 family AT3G02520 71.2 8.2e-93 337.0
Mch9g2079 . 50 299 14-3-3 family AT3G02520 67.8 1.3e-90 329.7
Mch8g0138 . 8 281 14-3-3 family AT3G02520 63.1 2.1e-88 322.4
Mch11g0666 . 1 220 14-3-3 family AT3G02520 69.4 2.3e-79 292.4
Mch8g0290 . 123 360 14-3-3 family AT5G65430 88.2 1.5e-115 412.5
Mch11g0676 . 1 242 14-3-3 family AT5G65430 79.4 1.0e-103 373.2
Mch8g0225 . 8 242 14-3-3 family AT5G65430 80.1 1.7e-103 372.5
Mch8g2395 . 7 241 14-3-3 family AT5G65430 78.8 3.9e-103 371.3
Mch8g0211 . 63 294 14-3-3 family AT5G65430 69.4 5.1e-87 317.8
Mch9g2079 . 50 282 14-3-3 family AT5G65430 69.5 1.6e-85 312.8
Mch8g0138 . 8 263 14-3-3 family AT5G65430 62.2 6.0e-80 294.3
Mch11g0666 . 15 215 14-3-3 family AT5G65430 70.1 5.8e-75 277.7
Mch8g0211 . 61 300 14-3-3 family AT2G42590 77.1 2.4e-103 372.1
Mch9g2079 . 48 300 14-3-3 family AT2G42590 75.2 1.6e-102 369.4
Mch8g0138 . 6 277 14-3-3 family AT2G42590 67.6 7.5e-97 350.5
Mch11g0666 . 1 224 14-3-3 family AT2G42590 75.0 4.3e-92 334.7
Mch8g2395 . 8 248 14-3-3 family AT2G42590 73.0 5.6e-92 334.3
Mch8g0225 . 8 248 14-3-3 family AT2G42590 70.5 2.1e-91 332.4
Mch11g0676 . 8 248 14-3-3 family AT2G42590 70.1 1.8e-90 329.3
Mch8g0290 . 125 362 14-3-3 family AT2G42590 64.7 4.4e-81 298.1
Mch8g0211 . 59 299 14-3-3 family AT1G22300 79.7 5.8e-104 374.0
Mch9g2079 . 47 287 14-3-3 family AT1G22300 77.2 1.3e-100 362.8
Mch8g0138 . 5 268 14-3-3 family AT1G22300 69.3 4.0e-97 351.3
Mch8g2395 . 4 246 14-3-3 family AT1G22300 69.5 9.5e-91 330.1
Mch11g0666 . 1 220 14-3-3 family AT1G22300 77.3 9.5e-91 330.1
Mch8g0225 . 8 246 14-3-3 family AT1G22300 69.9 1.5e-88 322.8
Mch11g0676 . 8 246 14-3-3 family AT1G22300 68.6 9.9e-88 320.1
Mch8g0290 . 125 362 14-3-3 family AT1G22300 64.3 2.9e-79 292.0
Mch8g0211 . 59 303 14-3-3 family AT1G34760 79.6 1.2e-104 376.3
Mch9g2079 . 47 290 14-3-3 family AT1G34760 80.7 2.0e-104 375.6
Mch8g0138 . 5 271 14-3-3 family AT1G34760 73.4 1.1e-99 359.8
Mch11g0666 . 1 223 14-3-3 family AT1G34760 79.4 3.9e-92 334.7
Mch8g0225 . 8 245 14-3-3 family AT1G34760 71.4 5.2e-89 324.3
Mch8g2395 . 4 250 14-3-3 family AT1G34760 69.6 9.0e-89 323.6
Mch11g0676 . 8 245 14-3-3 family AT1G34760 70.2 2.2e-87 318.9
Mch8g0290 . 125 361 14-3-3 family AT1G34760 64.1 5.4e-78 287.7
Mch9g2079 . 44 297 14-3-3 family AT1G26480 85.8 1.1e-116 416.4
Mch8g0138 . 2 278 14-3-3 family AT1G26480 78.7 8.5e-114 406.8
Mch8g0211 . 60 300 14-3-3 family AT1G26480 77.2 5.2e-103 370.9
Mch11g0666 . 1 221 14-3-3 family AT1G26480 77.4 1.7e-93 339.3
Mch8g0225 . 8 260 14-3-3 family AT1G26480 72.0 2.9e-93 338.6
Mch8g2395 . 5 256 14-3-3 family AT1G26480 72.4 1.9e-92 335.9
Mch11g0676 . 8 258 14-3-3 family AT1G26480 71.0 5.4e-92 334.3
Mch8g0290 . 125 358 14-3-3 family AT1G26480 66.2 2.1e-80 295.8
Mch9g2079 . 47 280 14-3-3 family AT1G78220 52.3 1.7e-63 239.6
Mch11g0666 . 1 213 14-3-3 family AT1G78220 50.5 7.0e-54 207.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114