Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0703 ATGATGGGAAAATTTCCATCCAGGTTCTTGTTTCTGATACTCTTAGCCCTTTTCATCTCTTCATCTGCTGCTCATGCTGATGATTCTCTCATCAATCTTGTCTCTTTAAGACACATTTGCAACTTCTCCACAGATTCTTCTTACTGCTTCTCTGTGCTTCAAAAATCCTCTGGGAATAATGTCTATGACTCCGGGCGGTTTTCGATCCGTCGTTCGTTGTCTAAAGCCTCTAGGTTCTTTGACTTGATTGACCAACATCTCCATAACAGTTCATCTGTCCCAAAATCAGTCATTGGAGCTCTCAAAGATTGTCAGTATCTTGCCCAACTAAATATCAATTTCTTGTCAAATTCATTCAGGGCTGTCAACGGCACTGATAGAAAGCTAAGTTACTCAAAAGCTGATTATATCCAGAGTCTTCTTAGTGCCATCTTAACCAACATTGATACTTGTCTTGATGGCCTAAGAACTGTGGCCTCAGGTTCCAGTTTGGAGAAGGATCTGTTGGCCCCACTCATTGATTGTACCAAATCCTACAGTCTTTCTCTGTCTCTTTTTACCAAGGGTTGGGTGCCCAGGAACAGAAACAGGACATCTGAGGGGAAGCCCAATCATCTCCAGTTTAGAAAAGGACCGCTACCATTGAGAATGTCGAGACACGACCGCACGGTTTACAACACGGTGGCAAATCGAAGAAGGCTTTCGTCTTCATCAGATGATGGAGTTTTGGTTAACGGCATTGTGGTTGTGAGTCAAGATGGCAGCGGAAACTTCCTCACCATAACAGAAGCTGTTGATGCAGCTCCAAACAACTCTGTTGCTGCCAATGGCTACTTCTTGATTTACATCACGGCTGGTGTTTACCAAGAGTACGTGTCCATCCCTTCAAAGAAGAAGTACTTGCTGATGATTGGCGATGGTATAAACCAGACCATAATTACGGGCAATCGGAGCGTTGCGGACGGGTGGACGACTTTCAACAGTGCAACTTTTGCTGTGGCAGGGGAAGGATTCATGGGAGTGAACATAACTTTCCAAAACACGGCGGGAGCGATAAAAGGGCAAGCGGTTGCCGTAAGGAGCGGGGCCGATATGTCGACCTTCTACAGCTGCAGCTTTGAGGGGTACCAGGATACCTTATACACACACTCCCTCAGGCAATTCTTTAGAGAATGTGACATCTACGGCACAGTAGACTTCATATTTGGGAATGCAGCCGTTGTGTTCCAAAACTGCTACATATATCCCCGTCTACCACGCGTAGGGCAGTCCAATATGATAACTGCTCAAGGTCGATCAGACCCGAACCAAAACACCGGGACCTCGATCCACAACTGCACGATCCGAGCCACGCCCGATTTGGCTGCAAGCAACAGGTACATGAACAAAACATATCTGGGAAGGCCATGGAAGCAATATTCAAGAACAGTGTACATGCAGTCATTTATAGATGGGTTTATAAATGGTGCTGGATGGGATCCATGGTCAGGTGAATATCTGAACACACTATATTATGGAGAGTATAATAACACAGGAGCTGGATCCAATACAACAAACAGAGTTGCTTGGCCTGGTTACCATGTGATTAATAATGCTACTCATGCTTCTAATTTTACAGTTTCAAACTTCTTGTTTGGGGAAGTGTGGTTGCCTCAAACTTCTGTGCCTTATACTGGAGGTTTGCTTTGA 1689 45.0 MMGKFPSRFLFLILLALFISSSAAHADDSLINLVSLRHICNFSTDSSYCFSVLQKSSGNNVYDSGRFSIRRSLSKASRFFDLIDQHLHNSSSVPKSVIGALKDCQYLAQLNINFLSNSFRAVNGTDRKLSYSKADYIQSLLSAILTNIDTCLDGLRTVASGSSLEKDLLAPLIDCTKSYSLSLSLFTKGWVPRNRNRTSEGKPNHLQFRKGPLPLRMSRHDRTVYNTVANRRRLSSSSDDGVLVNGIVVVSQDGSGNFLTITEAVDAAPNNSVAANGYFLIYITAGVYQEYVSIPSKKKYLLMIGDGINQTIITGNRSVADGWTTFNSATFAVAGEGFMGVNITFQNTAGAIKGQAVAVRSGADMSTFYSCSFEGYQDTLYTHSLRQFFRECDIYGTVDFIFGNAAVVFQNCYIYPRLPRVGQSNMITAQGRSDPNQNTGTSIHNCTIRATPDLAASNRYMNKTYLGRPWKQYSRTVYMQSFIDGFINGAGWDPWSGEYLNTLYYGEYNNTGAGSNTTNRVAWPGYHVINNATHASNFTVSNFLFGEVWLPQTSVPYTGGLL 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4630313 4636255 - MC11g0592 Mch11g0703 679637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0703 562 Gene3D - 244 561 IPR012334 -
Mch11g0703 562 FunFam Pectinesterase 242 561 - -
Mch11g0703 562 SMART PMEI_2 31 185 IPR006501 GO:0004857(InterPro)
Mch11g0703 562 Pfam Plant invertase/pectin methylesterase inhibitor 36 185 IPR006501 GO:0004857(InterPro)
Mch11g0703 562 CDD PMEI-like_3 39 190 - -
Mch11g0703 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 188 IPR035513 -
Mch11g0703 562 Pfam Pectinesterase 248 546 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch11g0703 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Mch11g0703 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 188 IPR035513 -
Mch11g0703 562 SUPERFAMILY Pectin lyase-like 244 560 IPR011050 -
Mch11g0703 562 PANTHER PECTINESTERASE 12 552 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0703 Mch-Chr11:4630313 Mch2g1445 Mch-Chr2:10680067 5.12E-192 dispersed
Mch11g0703 Mch-Chr11:4630313 Mch9g0696 Mch-Chr9:5226477 1.04E-222 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0703 K01051 - csv:101205879 923.694