Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0706 ATGTTCCCCAAGCCTCACCACCAACCACCGCCCCATTCCCAATCTTTTCCCCGCTCCTTCTCCGTCGCCGCCACTCCGCCGCGCGATTCTACCGACGACGATGCCGGCGCCGACCCCTCGCCTCTCACCCACGCCATGCTGCCCAAAGAACCGGCCTCCGGCGGCGACGGAGCTTCAATCGAGGTGGTCCGCCGCCCCCGCGGCCGCCCGCCGGGCTCCAAAAACAAGCCGAAGCCGGCCGCCGTCGTCGTCGCCGCCCGGGACGCCGAGCCGGCGATGAGTCCTTATGTACTTGAAGTTCCCGGCGGTAGCGATATCGTGGAGGCTATTGCCCGATTTTGCCGCCTCAGAAACATAGGGCTTTGTATTCTGAACGCTTACGGAACCGTCGCTGACGTCACTCTCCGGCAGCCGTCCACCTCTCCGGCTGCGAACGTCACGTTCCACGGACGATTCGATATCCTCTTCGTACGCGCGACGTTCGTGCCTCATACGACGTCGTTGCCCGTTCCGAGTGGATTCACCATCACGCTAGCGGGACCGCAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGAGCTCTAATCAGCGCCGGAACCGTCTATGTGATCGCCGCCTCATTCAACAATCCGTCCTATCAGCGTCTGCCATCGGAAGACGAGGTCAGAAAATTAACCTTCAGCGACGTCGAAGAAGGCCACTCTCCGCCGATTTCCGCCGGCAAGGATAGCGACAACGCCGCCGAGACCTGCGGGCTACTTCCGATGTACAACACTCACTCATCCTCCGACGTCATATGGACTCCCGCCGCCAGACAACCGCCGACGTCGCACCATCGCCAGTAC 843 62.75 MFPKPHHQPPPHSQSFPRSFSVAATPPRDSTDDDAGADPSPLTHAMLPKEPASGGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAARDAEPAMSPYVLEVPGGSDIVEAIARFCRLRNIGLCILNAYGTVADVTLRQPSTSPAANVTFHGRFDILFVRATFVPHTTSLPVPSGFTITLAGPQGQIFGGLVAGALISAGTVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEGHSPPISAGKDSDNAAETCGLLPMYNTHSSSDVIWTPAARQPPTSHHRQY 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4654981 4655823 - MC11g0595 Mch11g0706 679640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0706 281 CDD DUF296 95 207 IPR005175 -
Mch11g0706 281 Gene3D - 94 232 - -
Mch11g0706 281 ProSiteProfiles PPC domain profile profile. 90 230 IPR005175 -
Mch11g0706 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Mch11g0706 281 MobiDBLite consensus disorder prediction 1 80 - -
Mch11g0706 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 233 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Mch11g0706 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 209 IPR005175 -
Mch11g0706 281 FunFam AT-hook motif nuclear-localized protein 94 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0706 Mch-Chr11:4654981 Mch5g0070 Mch-Chr5:482774 1.77E-46 dispersed
Mch11g0706 Mch-Chr11:4654981 Mch8g0280 Mch-Chr8:1926045 4.15E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0706 - - - 0.0