Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0714 ATGCCGCACAGAACGACTTACTTCTTCCCGAGGCAATTTCCGGATCGCGGATTTGACTCGGCATCAACTTCCAAACAGATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACTGAAAGCGACGCGAAACCGACCCCGCGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGACTCAAAGCAATAAGAAACTTCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCGACTGCTCACGTGAAAACTTGGCTTTCCAATTGCGACGAGGAGCACGAGCTTTTGCTTCCGCCGCCTACCTCGGAGCCGGACCACGACACAACGCCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGTCAAGTTTCACTGCCTAGGGTATCAAGCGGGAGTAGCTATGCGGGGAGTTTGTTTTCAGGAACGGGAACGGGAACGGGGACAGTGGATGGAAATTTTTCCAGCGATGTTAAGGATTCATCGGCCTCAAAGATCTTGTCCTCGCGCACGGCAAGGCCGGAAGAGATTGAGGTTGAAGGTAGTAAGGAGAACCTAGCAAAGAGAGCGACAGAGAGTTATTACCTGCAACTTGCTCTGGCTGCATCGCTTCGCTCCAATGCTAGTCTCGCTGGCGATCCTGTGCTTATGGAGGAGGGCAGGGTCGACGTTACGGACGCTGAAACCGTTTCTTACCGACTTTGGGTAAGTGGTTGCCTCTCCTACTCCGACAAAATTTCAGATGGCTTCTACAATATTTTGGGTATGAACCCATATCTCTGGGTTATGTGCAATGATTTTGAGGAAGGTAGACGGCTACCACCACTGATGTCGCTTAAAACCATTGAACCAAGTGAGACGTCAATGGAGGTGGTTCTTGTTGATAGACGTGGGGACTCTCGACTGAAAGAGCTTGAAGACAAAGCACAAGAACTATATTGTGCTTCAGAGAACACCCTGGTGTTGGTGGAGAAACTAGGAAAACTTGTTGCGATCTACATGGGGGGCACTTTTCCGGTGGAGCAAGGAGGGTTACATCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTTCAGAAGTGCATAGTGCTTCCAATTGGTAGTCTTTCTATGGGGCTATGCAGACACCGTGCAATACTTTTCAAGAAATTGGCAGATTATATAGGTTTGCCATGTCGGATAGCTAAAGGTTGCAAGTATTGTGTTGCAGATCATCGATCCTCTTGCCTCGTCAAAATTGAAGACGACAGGCAATCATTGAGAGAATATGTAGTTGATTTAGTTGGGGAACCAGGAAATATACATGGTTCAGATTCCTCAATTAATGGAGGGTTCCCATCTTCAATGCCTTCACCACTCCACATTTCTCATTTAAAAGAGTTCCAAGAACCTTTTGTGGAAAGCCATCAGACCGTAGGCTCAAAGCAAAATCGTGCTTTTCCTCTAAATCTTCTACATTCAGGTTTTGGAGAGCACCAGATGAAAGGGGGAAGCATTTTACATAAGAGTCCAGGGCCTGAAACTGATAATTTGGTCGATCAAGCTTGTATGAGATCATTGCAGCTGTGTTTGGAAACAAAAGTGAGCAAGGAGTGTGTGCTTCAGAGTCATATATTGGCATCTGCTGACGCTGATGCCTCCAAGGTGTTGGATTCTGTTGCTGGTGCATCTTTACATGAAAACAAAGTAGTAGTTGAAGAAATATGCCGGACAGAGGCGGTTGTGGCAGGGATTTCACTGAATGGAACTCCTTCAACTCAAACAAATTCAAAGGAGGTTGAGGGTCGGTCTCAAAATTGTTCAGCGGCATACCTGACACTTGAACCATCACTTGCAATGGATTGGCTGGAAATTGCATGGGATGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGAACAGTGCATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACCGTGCAGGATTTCCATGACGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTCCGCCATCCAAATGTGGTCCTCTTCATGGGTGCAGTTACAAAACGACCTCATCTTTCGATAGTAACTGAATACCTGCCAAGGGGTAGTCTCTATCGTCTAATTCACAGGCCATCTTCTGGCGAATTGATGGATCAAAGGAAGCGATTGCGCATGGCACTGGATGTTGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCTCCTAACTTGCTGGTTGACAAAAATTGGACAGTAAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCAAAATCTGTAGCTGGAACACCCGAGTGGATGGCTCCAGAATTCCTTCGGGGAGAGCCTTCAAATGAGAAGTCTGACGTTTACAGTTTCGGAGTGATCCTCTGGGAACTGGTAACAATGCAACAACCTTGGAGTGGGCTTGGTCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCCATCCCATCAAGTACTTCCCCACTGCTGGCTTCGCTCATCGAGTCTTGCTGGGCAGACGATCCGGTTCAGCGCCCATCCTTCGCAAGCATAGTCGAGTCTTTAAAGAAATTGCTCAAATCTCCACAGCAGTTGATAGCGATGGGCGGAACGTGA 2733 46.98 MPHRTTYFFPRQFPDRGFDSASTSKQILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKTQSNKKLPAFYDWLVDKKATRSATAHVKTWLSNCDEEHELLLPPPTSEPDHDTTPVKDRSVDRNFDRQVSLPRVSSGSSYAGSLFSGTGTGTGTVDGNFSSDVKDSSASKILSSRTARPEEIEVEGSKENLAKRATESYYLQLALAASLRSNASLAGDPVLMEEGRVDVTDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDFEEGRRLPPLMSLKTIEPSETSMEVVLVDRRGDSRLKELEDKAQELYCASENTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIAKGCKYCVADHRSSCLVKIEDDRQSLREYVVDLVGEPGNIHGSDSSINGGFPSSMPSPLHISHLKEFQEPFVESHQTVGSKQNRAFPLNLLHSGFGEHQMKGGSILHKSPGPETDNLVDQACMRSLQLCLETKVSKECVLQSHILASADADASKVLDSVAGASLHENKVVVEEICRTEAVVAGISLNGTPSTQTNSKEVEGRSQNCSAAYLTLEPSLAMDWLEIAWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPSSTSPLLASLIESCWADDPVQRPSFASIVESLKKLLKSPQQLIAMGGT 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4713349 4723292 - MC11g0603 Mch11g0714 679648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0714 910 SUPERFAMILY Protein kinase-like (PK-like) 620 893 IPR011009 -
Mch11g0714 910 PANTHER SERINE-THREONINE PROTEIN KINASE 225 898 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch11g0714 910 SMART serkin_6 640 898 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 MobiDBLite consensus disorder prediction 19 57 - -
Mch11g0714 910 MobiDBLite consensus disorder prediction 110 137 - -
Mch11g0714 910 ProSitePatterns Protein kinases ATP-binding region signature. 646 667 IPR017441 GO:0005524(InterPro)
Mch11g0714 910 MobiDBLite consensus disorder prediction 181 200 - -
Mch11g0714 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 FunFam Serine/threonine-protein kinase CTR1 719 904 - -
Mch11g0714 910 Gene3D Phosphorylase Kinase; domain 1 633 717 - -
Mch11g0714 910 Gene3D Transferase(Phosphotransferase) domain 1 719 906 - -
Mch11g0714 910 ProSiteProfiles Protein kinase domain profile. 640 898 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 MobiDBLite consensus disorder prediction 110 145 - -
Mch11g0714 910 MobiDBLite consensus disorder prediction 25 40 - -
Mch11g0714 910 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 PRINTS Tyrosine kinase catalytic domain signature 821 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 PRINTS Tyrosine kinase catalytic domain signature 755 773 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 Pfam Protein tyrosine and serine/threonine kinase 640 894 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0714 910 CDD STKc_MAP3K-like 646 894 - -
Mch11g0714 910 FunFam Serine/threonine-protein kinase isoform 1 630 718 - -
Mch11g0714 910 Pfam Ethylene-responsive protein kinase Le-CTR1 243 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0714 Mch-Chr11:4713349 Mch1g0900 Mch-Chr1:12340518 9.70E-199 dispersed
Mch11g0714 Mch-Chr11:4713349 Mch5g1658 Mch-Chr5:17396094 2.85E-201 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77060 PF07714 PK_Tyr_Ser-Thr 5.20E-64 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0714 - - - 0.0